RNA–Protein interactions for RNA: ENST00000561954.1

IFT140-205, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 826 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-205ENST00000561954 UBE4BO95155 1302 aa15.37■□□□□ 0.05
IFT140-205ENST00000561954 ZNF623O75123 536 aa15.36■□□□□ 0.05
IFT140-205ENST00000561954 TOM1L1O75674 476 aa15.36■□□□□ 0.05
IFT140-205ENST00000561954 IBSPP21815 317 aaPredicted RBP15.36■□□□□ 0.05
IFT140-205ENST00000561954 GTF2BQ00403 316 aa15.36■□□□□ 0.05
IFT140-205ENST00000561954 CUL4BQ13620 913 aa15.36■□□□□ 0.05
IFT140-205ENST00000561954 POSTNQ15063 836 aa15.36■□□□□ 0.05
IFT140-205ENST00000561954 ZNF568Q3ZCX4 644 aa15.36■□□□□ 0.05
IFT140-205ENST00000561954 FAM26FQ5R3K3 315 aa15.36■□□□□ 0.05
IFT140-205ENST00000561954 FAM117BQ6P1L5 589 aa15.36■□□□□ 0.05
IFT140-205ENST00000561954 TAS1R3Q7RTX0 852 aa15.36■□□□□ 0.05
IFT140-205ENST00000561954 CMTR2Q8IYT2 770 aaKnown RBP15.36■□□□□ 0.05
IFT140-205ENST00000561954 CRIPAKQ8N1N5 446 aa15.36■□□□□ 0.05
IFT140-205ENST00000561954 RNF169Q8NCN4 708 aa15.36■□□□□ 0.05
IFT140-205ENST00000561954 ENGASEQ8NFI3 743 aa15.36■□□□□ 0.05
IFT140-205ENST00000561954 TIFAQ96CG3 184 aa15.36■□□□□ 0.05
IFT140-205ENST00000561954 FIZ1Q96SL8 496 aa15.36■□□□□ 0.05
IFT140-205ENST00000561954 MRPL9Q9BYD2 267 aaKnown RBP15.36■□□□□ 0.05
IFT140-205ENST00000561954 BLZF1Q9H2G9 400 aa15.36■□□□□ 0.05
IFT140-205ENST00000561954 TNFSF13BQ9Y275 285 aa15.36■□□□□ 0.05
IFT140-205ENST00000561954 PCDHB2Q9Y5E7 798 aa15.36■□□□□ 0.05
IFT140-205ENST00000561954 TRIOBPQ9H2D6 2365 aa15.36■□□□□ 0.05
IFT140-205ENST00000561954 GRXCR1A8MXD5 290 aa15.35■□□□□ 0.05
IFT140-205ENST00000561954 EIF3DO15371 548 aaKnown RBP eCLIP15.35■□□□□ 0.05
IFT140-205ENST00000561954 DGKIO75912 1065 aa15.35■□□□□ 0.05
IFT140-205ENST00000561954 PIGRP01833 764 aa15.35■□□□□ 0.05
IFT140-205ENST00000561954 NMT1P30419 496 aaKnown RBP15.35■□□□□ 0.05
IFT140-205ENST00000561954 LIG4P49917 911 aa15.35■□□□□ 0.05
IFT140-205ENST00000561954 RABGGTBP53611 331 aa15.35■□□□□ 0.05
IFT140-205ENST00000561954 SNW1Q13573 536 aaKnown RBP15.35■□□□□ 0.05
IFT140-205ENST00000561954 NOLC1Q14978 699 aaKnown RBP eCLIP15.35■□□□□ 0.05
IFT140-205ENST00000561954 UBXN11Q5T124 520 aa15.35■□□□□ 0.05
IFT140-205ENST00000561954 L1TD1Q5T7N2 865 aaKnown RBP15.35■□□□□ 0.05
IFT140-205ENST00000561954 PPP2R2DQ66LE6 453 aa15.35■□□□□ 0.05
IFT140-205ENST00000561954 GLB1LQ6UWU2 654 aa15.35■□□□□ 0.05
IFT140-205ENST00000561954 MPZL3Q6UWV2 235 aa15.35■□□□□ 0.05
IFT140-205ENST00000561954 ZNF720Q7Z2F6 126 aa15.35■□□□□ 0.05
IFT140-205ENST00000561954 TMCO2Q7Z6W1 182 aaPredicted RBP15.35■□□□□ 0.05
IFT140-205ENST00000561954 ZNF598Q86UK7 904 aaKnown RBP15.35■□□□□ 0.05
IFT140-205ENST00000561954 GRAMD1CQ8IYS0 662 aa15.35■□□□□ 0.05
IFT140-205ENST00000561954 LRRC43Q8N309 656 aa15.35■□□□□ 0.05
IFT140-205ENST00000561954 SP7Q8TDD2 431 aaPredicted RBP15.35■□□□□ 0.05
IFT140-205ENST00000561954 ACO2Q99798 780 aaKnown RBP15.35■□□□□ 0.05
IFT140-205ENST00000561954 TMEM117Q9H0C3 514 aa15.35■□□□□ 0.05
IFT140-205ENST00000561954 TMEM206Q9H813 350 aa15.35■□□□□ 0.05
IFT140-205ENST00000561954 SLC28A3Q9HAS3 691 aa15.35■□□□□ 0.05
IFT140-205ENST00000561954 RC3H2Q9HBD1 1191 aaKnown RBP15.35■□□□□ 0.05
IFT140-205ENST00000561954 ANKFY1Q9P2R3 1169 aa15.35■□□□□ 0.05
IFT140-205ENST00000561954 RWDD3Q9Y3V2 267 aa15.35■□□□□ 0.05
IFT140-205ENST00000561954 IPPQ9Y573 584 aa15.35■□□□□ 0.05
IFT140-205ENST00000561954 PTPRSQ13332 1948 aa15.35■□□□□ 0.05
IFT140-205ENST00000561954 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.34■□□□□ 0.05
IFT140-205ENST00000561954 CARNS1A5YM72 827 aa15.34■□□□□ 0.05
IFT140-205ENST00000561954 GADD45BO75293 160 aaPredicted RBP15.34■□□□□ 0.05
IFT140-205ENST00000561954 PRPF40AO75400 957 aaKnown RBP15.34■□□□□ 0.05
IFT140-205ENST00000561954 NR1I2O75469 434 aa15.34■□□□□ 0.05
IFT140-205ENST00000561954 PPP1R37O75864 691 aa15.34■□□□□ 0.05
IFT140-205ENST00000561954 NPTXRO95502 500 aa15.34■□□□□ 0.05
IFT140-205ENST00000561954 CA3P07451 260 aa15.34■□□□□ 0.05
IFT140-205ENST00000561954 MCF2P10911 925 aa15.34■□□□□ 0.05
IFT140-205ENST00000561954 ITGA4P13612 1032 aa15.34■□□□□ 0.05
IFT140-205ENST00000561954 ATF7P17544 494 aaPredicted RBP15.34■□□□□ 0.05
IFT140-205ENST00000561954 BTG3Q14201 252 aaPredicted RBP15.34■□□□□ 0.05
IFT140-205ENST00000561954 KYAT1Q16773 422 aa15.34■□□□□ 0.05
IFT140-205ENST00000561954 NT5DC1Q5TFE4 455 aa15.34■□□□□ 0.05
IFT140-205ENST00000561954 MRPL10Q7Z7H8 261 aaKnown RBP15.34■□□□□ 0.05
IFT140-205ENST00000561954 ELOA2Q8IYF1 753 aaPredicted RBP15.34■□□□□ 0.05
IFT140-205ENST00000561954 URGCPQ8TCY9 931 aa15.34■□□□□ 0.05
IFT140-205ENST00000561954 ZNF689Q96CS4 500 aaPredicted RBP15.34■□□□□ 0.05
IFT140-205ENST00000561954 ACCSQ96QU6 501 aa15.34■□□□□ 0.05
IFT140-205ENST00000561954 TARS2Q9BW92 718 aaKnown RBP15.34■□□□□ 0.05
IFT140-205ENST00000561954 EIF2AQ9BY44 585 aaKnown RBP15.34■□□□□ 0.05
IFT140-205ENST00000561954 NXF3Q9H4D5 531 aaKnown RBP15.34■□□□□ 0.05
IFT140-205ENST00000561954 RSAD1Q9HA92 442 aa15.34■□□□□ 0.05
IFT140-205ENST00000561954 RMND1Q9NWS8 449 aa15.34■□□□□ 0.05
IFT140-205ENST00000561954 MYH11P35749 1972 aa15.34■□□□□ 0.05
IFT140-205ENST00000561954 CLDN3O15551 220 aa15.33■□□□□ 0.04
IFT140-205ENST00000561954 KIF20AO95235 890 aa15.33■□□□□ 0.04
IFT140-205ENST00000561954 SMC2O95347 1197 aa15.33■□□□□ 0.04
IFT140-205ENST00000561954 RPN1P04843 607 aaKnown RBP15.33■□□□□ 0.04
IFT140-205ENST00000561954 EDN1P05305 212 aa15.33■□□□□ 0.04
IFT140-205ENST00000561954 FGFR1P11362 822 aa15.33■□□□□ 0.04
IFT140-205ENST00000561954 PROZP22891 400 aa15.33■□□□□ 0.04
IFT140-205ENST00000561954 PBX2P40425 430 aa15.33■□□□□ 0.04
IFT140-205ENST00000561954 EHHADHQ08426 723 aa15.33■□□□□ 0.04
IFT140-205ENST00000561954 DPYDQ12882 1025 aa15.33■□□□□ 0.04
IFT140-205ENST00000561954 PSMD2Q13200 908 aa15.33■□□□□ 0.04
IFT140-205ENST00000561954 ZNF697Q5TEC3 545 aa15.33■□□□□ 0.04
IFT140-205ENST00000561954 FIBCD1Q8N539 461 aa15.33■□□□□ 0.04
IFT140-205ENST00000561954 SAMD11Q96NU1 681 aa15.33■□□□□ 0.04
IFT140-205ENST00000561954 TCHPQ9BT92 498 aa15.33■□□□□ 0.04
IFT140-205ENST00000561954 STRA6Q9BX79 667 aa15.33■□□□□ 0.04
IFT140-205ENST00000561954 GTPBP4Q9BZE4 634 aaKnown RBP15.33■□□□□ 0.04
IFT140-205ENST00000561954 NKX2-4Q9H2Z4 354 aa15.33■□□□□ 0.04
IFT140-205ENST00000561954 TOPORSQ9NS56 1045 aaPredicted RBP15.33■□□□□ 0.04
IFT140-205ENST00000561954 TBC1D7Q9P0N9 293 aa15.33■□□□□ 0.04
IFT140-205ENST00000561954 YBX2Q9Y2T7 364 aaKnown RBP15.33■□□□□ 0.04
IFT140-205ENST00000561954 GIT1Q9Y2X7 761 aa15.33■□□□□ 0.04
IFT140-205ENST00000561954 TTC3P53804 2025 aa15.33■□□□□ 0.04
IFT140-205ENST00000561954 TTLL13PA6NNM8 815 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms