RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 TRIP11Q15643 1979 aa11.23□□□□□ -0.61
USP3-219ENST00000561326 KBTBD13C9JR72 458 aa11.23□□□□□ -0.61
USP3-219ENST00000561326 M0QZ92 97 aa11.23□□□□□ -0.61
USP3-219ENST00000561326 TREHO43280 583 aa11.23□□□□□ -0.61
USP3-219ENST00000561326 EXTL3O43909 919 aa11.23□□□□□ -0.61
USP3-219ENST00000561326 TOM1L1O75674 476 aa11.23□□□□□ -0.61
USP3-219ENST00000561326 ERLIN2O94905 339 aa11.23□□□□□ -0.61
USP3-219ENST00000561326 GJB1P08034 283 aa11.23□□□□□ -0.61
USP3-219ENST00000561326 SFPQP23246 707 aaKnown RBP eCLIP11.23□□□□□ -0.61
USP3-219ENST00000561326 ADSSP30520 456 aa11.23□□□□□ -0.61
USP3-219ENST00000561326 HOXC8P31273 242 aa11.23□□□□□ -0.61
USP3-219ENST00000561326 PBX1P40424 430 aa11.23□□□□□ -0.61
USP3-219ENST00000561326 GPC3P51654 580 aa11.23□□□□□ -0.61
USP3-219ENST00000561326 VAMP7P51809 220 aa11.23□□□□□ -0.61
USP3-219ENST00000561326 ACLYP53396 1101 aa11.23□□□□□ -0.61
USP3-219ENST00000561326 CETN1Q12798 172 aa11.23□□□□□ -0.61
USP3-219ENST00000561326 SNRNP35Q16560 246 aaKnown RBP11.23□□□□□ -0.61
USP3-219ENST00000561326 KYAT1Q16773 422 aa11.23□□□□□ -0.61
USP3-219ENST00000561326 TSR1Q2NL82 804 aaKnown RBP11.23□□□□□ -0.61
USP3-219ENST00000561326 DCAF17Q5H9S7 520 aaPredicted RBP11.23□□□□□ -0.61
USP3-219ENST00000561326 CCSAPQ6IQ19 270 aaPredicted RBP11.23□□□□□ -0.61
USP3-219ENST00000561326 TSHZ1Q6ZSZ6 1077 aa11.23□□□□□ -0.61
USP3-219ENST00000561326 SESTD1Q86VW0 696 aa11.23□□□□□ -0.61
USP3-219ENST00000561326 DNAJC5GQ8N7S2 189 aa11.23□□□□□ -0.61
USP3-219ENST00000561326 ZNF397Q8NF99 534 aaPredicted RBP11.23□□□□□ -0.61
USP3-219ENST00000561326 DNAJB3Q8WWF6 145 aa11.23□□□□□ -0.61
USP3-219ENST00000561326 ZBTB10Q96DT7 871 aa11.23□□□□□ -0.61
USP3-219ENST00000561326 BORCS6Q96GS4 357 aa11.23□□□□□ -0.61
USP3-219ENST00000561326 ACO2Q99798 780 aaKnown RBP11.23□□□□□ -0.61
USP3-219ENST00000561326 MSTO1Q9BUK6 570 aa11.23□□□□□ -0.61
USP3-219ENST00000561326 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.23□□□□□ -0.611e-6■■■■■ 28.5
USP3-219ENST00000561326 IFT122Q9HBG6 1241 aa11.23□□□□□ -0.61
USP3-219ENST00000561326 A0A0B4J269 797 aa11.22□□□□□ -0.61
USP3-219ENST00000561326 AKR1B15C9JRZ8 316 aaPredicted RBP11.22□□□□□ -0.61
USP3-219ENST00000561326 N4BP1O75113 896 aaKnown RBP11.22□□□□□ -0.61
USP3-219ENST00000561326 TRIM21P19474 475 aaKnown RBP11.22□□□□□ -0.61
USP3-219ENST00000561326 MBTD1Q05BQ5 628 aa11.22□□□□□ -0.61
USP3-219ENST00000561326 BFSP1Q12934 665 aa11.22□□□□□ -0.61
USP3-219ENST00000561326 TBX2Q13207 712 aaPredicted RBP11.22□□□□□ -0.61
USP3-219ENST00000561326 ITGA7Q13683 1181 aa11.22□□□□□ -0.61
USP3-219ENST00000561326 SYCP1Q15431 976 aa11.22□□□□□ -0.61
USP3-219ENST00000561326 SURF1Q15526 300 aa11.22□□□□□ -0.61
USP3-219ENST00000561326 PKN2Q16513 984 aaKnown RBP11.22□□□□□ -0.61
USP3-219ENST00000561326 ATF7IP2Q5U623 682 aa11.22□□□□□ -0.61
USP3-219ENST00000561326 LHX8Q68G74 356 aa11.22□□□□□ -0.61
USP3-219ENST00000561326 SLC39A4Q6P5W5 647 aa11.22□□□□□ -0.61
USP3-219ENST00000561326 GBP6Q6ZN66 633 aa11.22□□□□□ -0.61
USP3-219ENST00000561326 CNGA4Q8IV77 575 aa11.22□□□□□ -0.61
USP3-219ENST00000561326 NEK11Q8NG66 645 aa11.22□□□□□ -0.61
USP3-219ENST00000561326 TMC2Q8TDI7 906 aa11.22□□□□□ -0.61
USP3-219ENST00000561326 SH3TC2Q8TF17 1288 aa11.22□□□□□ -0.61
USP3-219ENST00000561326 SAAL1Q96ER3 474 aa11.22□□□□□ -0.61
USP3-219ENST00000561326 MFSD14AQ96MC6 490 aa11.22□□□□□ -0.61
USP3-219ENST00000561326 FBXL18Q96ME1 805 aa11.22□□□□□ -0.61
USP3-219ENST00000561326 FAM213AQ9BRX8 229 aa11.22□□□□□ -0.61
USP3-219ENST00000561326 MMRN2Q9H8L6 949 aa11.22□□□□□ -0.61
USP3-219ENST00000561326 ANKFY1Q9P2R3 1169 aa11.22□□□□□ -0.61
USP3-219ENST00000561326 TNFSF13BQ9Y275 285 aa11.22□□□□□ -0.61
USP3-219ENST00000561326 LUC7L2Q9Y383 392 aaKnown RBP11.22□□□□□ -0.61
USP3-219ENST00000561326 GTPBP10A4D1E9 387 aaKnown RBP11.21□□□□□ -0.61
USP3-219ENST00000561326 GOLGA8IPA6NC78 632 aa11.21□□□□□ -0.61
USP3-219ENST00000561326 GOLGA8JA6NMD2 632 aa11.21□□□□□ -0.61
USP3-219ENST00000561326 TISP43B9A030 160 aa11.21□□□□□ -0.61
USP3-219ENST00000561326 TULP1O00294 542 aaPredicted RBP11.21□□□□□ -0.61
USP3-219ENST00000561326 OGTO15294 1046 aa11.21□□□□□ -0.61
USP3-219ENST00000561326 AXLP30530 894 aa11.21□□□□□ -0.61
USP3-219ENST00000561326 GTF2H1P32780 548 aa11.21□□□□□ -0.61
USP3-219ENST00000561326 CRYBB1P53674 252 aaPredicted RBP11.21□□□□□ -0.61
USP3-219ENST00000561326 ZNF200P98182 395 aaPredicted RBP11.21□□□□□ -0.61
USP3-219ENST00000561326 KIZQ2M2Z5 673 aa11.21□□□□□ -0.61
USP3-219ENST00000561326 FIGNQ5HY92 759 aa11.21□□□□□ -0.61
USP3-219ENST00000561326 MPZL3Q6UWV2 235 aa11.21□□□□□ -0.61
USP3-219ENST00000561326 RUFY4Q6ZNE9 571 aa11.21□□□□□ -0.61
USP3-219ENST00000561326 CTU1Q7Z7A3 348 aaKnown RBP11.21□□□□□ -0.61
USP3-219ENST00000561326 RPAINQ86UA6 219 aa11.21□□□□□ -0.61
USP3-219ENST00000561326 LRRC8AQ8IWT6 810 aa11.21□□□□□ -0.61
USP3-219ENST00000561326 CPLX3Q8WVH0 158 aa11.21□□□□□ -0.61
USP3-219ENST00000561326 SLC35C1Q96A29 364 aa11.21□□□□□ -0.61
USP3-219ENST00000561326 CCDC51Q96ER9 411 aa11.21□□□□□ -0.61
USP3-219ENST00000561326 ZNF668Q96K58 619 aaPredicted RBP11.21□□□□□ -0.61
USP3-219ENST00000561326 FNBP1Q96RU3 617 aa11.21□□□□□ -0.61
USP3-219ENST00000561326 ADPGKQ9BRR6 497 aa11.21□□□□□ -0.61
USP3-219ENST00000561326 EDEM3Q9BZQ6 932 aa11.21□□□□□ -0.61
USP3-219ENST00000561326 ADAMTS10Q9H324 1103 aa11.21□□□□□ -0.61
USP3-219ENST00000561326 NOD1Q9Y239 953 aa11.21□□□□□ -0.61
USP3-219ENST00000561326 GINS2Q9Y248 185 aa11.21□□□□□ -0.61
USP3-219ENST00000561326 PCNTO95613 3336 aa11.21□□□□□ -0.62
USP3-219ENST00000561326 ANK1P16157 1881 aa11.21□□□□□ -0.62
USP3-219ENST00000561326 CNTNAP2Q9UHC6 1331 aa11.2□□□□□ -0.62
USP3-219ENST00000561326 P4HA2O15460 535 aa11.2□□□□□ -0.62
USP3-219ENST00000561326 GPR32O75388 356 aa11.2□□□□□ -0.62
USP3-219ENST00000561326 MCF2P10911 925 aa11.2□□□□□ -0.62
USP3-219ENST00000561326 DARSP14868 501 aaKnown RBP11.2□□□□□ -0.62
USP3-219ENST00000561326 EIF4BP23588 611 aaKnown RBP11.2□□□□□ -0.62
USP3-219ENST00000561326 FMO5P49326 533 aa11.2□□□□□ -0.62
USP3-219ENST00000561326 MCCD1P59942 119 aaPredicted RBP11.2□□□□□ -0.62
USP3-219ENST00000561326 POU5F1Q01860 360 aaKnown RBP11.2□□□□□ -0.62
USP3-219ENST00000561326 MCL1Q07820 350 aa11.2□□□□□ -0.62
USP3-219ENST00000561326 CYP24A1Q07973 514 aa11.2□□□□□ -0.62
USP3-219ENST00000561326 RBL2Q08999 1139 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms