RNA–Protein interactions for RNA: ENST00000561152.1

TCF12-222, Transcript of transcription factor 12, human

TSL 5

Gene TCF12, Length 675 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-222	ENST00000561152	C5orf67	F2Z3F1	127 aa		28.35	■■■□□ 2.13
TCF12-222	ENST00000561152	GTPBP6	O43824	516 aa	Predicted RBP	28.35	■■■□□ 2.13
TCF12-222	ENST00000561152	ITGA4	P13612	1032 aa		28.35	■■■□□ 2.13
TCF12-222	ENST00000561152	NCKAP1L	P55160	1127 aa		28.35	■■■□□ 2.13
TCF12-222	ENST00000561152	AMPD3	Q01432	767 aa		28.35	■■■□□ 2.13
TCF12-222	ENST00000561152	E2F4	Q16254	413 aa		28.35	■■■□□ 2.13
TCF12-222	ENST00000561152	DYM	Q7RTS9	669 aa		28.35	■■■□□ 2.13
TCF12-222	ENST00000561152	TMEM161B	Q8NDZ6	487 aa		28.35	■■■□□ 2.13
TCF12-222	ENST00000561152	LPP	Q93052	612 aa		28.35	■■■□□ 2.13
TCF12-222	ENST00000561152	DHX58	Q96C10	678 aa		28.35	■■■□□ 2.13
TCF12-222	ENST00000561152	C11orf84	Q9BUA3	381 aa	Predicted RBP	28.35	■■■□□ 2.13
TCF12-222	ENST00000561152	PDZD7	Q9H5P4	517 aa		28.35	■■■□□ 2.13
TCF12-222	ENST00000561152	RSAD1	Q9HA92	442 aa		28.35	■■■□□ 2.13
TCF12-222	ENST00000561152	CDH23	Q9H251	3354 aa		28.34	■■■□□ 2.13
TCF12-222	ENST00000561152	EPOP	A6NHQ4	379 aa		28.34	■■■□□ 2.13
TCF12-222	ENST00000561152	MYMK	A6NI61	221 aa		28.34	■■■□□ 2.13
TCF12-222	ENST00000561152	TRAK2	O60296	914 aa		28.34	■■■□□ 2.13
TCF12-222	ENST00000561152	NPTXR	O95502	500 aa		28.34	■■■□□ 2.13
TCF12-222	ENST00000561152	LINC00271	P0C7V0	271 aa		28.34	■■■□□ 2.13
TCF12-222	ENST00000561152	IGFBP4	P22692	258 aa		28.34	■■■□□ 2.13
TCF12-222	ENST00000561152	CMA1	P23946	247 aa		28.34	■■■□□ 2.13
TCF12-222	ENST00000561152	LONRF3	Q496Y0	759 aa		28.34	■■■□□ 2.13
TCF12-222	ENST00000561152	ATF7IP2	Q5U623	682 aa		28.34	■■■□□ 2.13
TCF12-222	ENST00000561152	SMG8	Q8ND04	991 aa	Known RBP	28.34	■■■□□ 2.13
TCF12-222	ENST00000561152	URGCP	Q8TCY9	931 aa		28.34	■■■□□ 2.13
TCF12-222	ENST00000561152	CHAMP1	Q96JM3	812 aa		28.34	■■■□□ 2.13
TCF12-222	ENST00000561152	TYW1	Q9NV66	732 aa	Known RBP	28.34	■■■□□ 2.13
TCF12-222	ENST00000561152	CHD7	Q9P2D1	2997 aa		28.33	■■■□□ 2.13
TCF12-222	ENST00000561152	COL4A4	P53420	1690 aa	Predicted RBP	28.33	■■■□□ 2.13
TCF12-222	ENST00000561152		H3BNC9	293 aa		28.33	■■■□□ 2.13
TCF12-222	ENST00000561152	RFXAP	O00287	272 aa		28.33	■■■□□ 2.13
TCF12-222	ENST00000561152	POLR2D	O15514	142 aa	Known RBP	28.33	■■■□□ 2.13
TCF12-222	ENST00000561152	LAG3	P18627	525 aa		28.33	■■■□□ 2.13
TCF12-222	ENST00000561152	CSPP1	Q1MSJ5	1256 aa		28.33	■■■□□ 2.13
TCF12-222	ENST00000561152	DCAF4L1	Q3SXM0	396 aa		28.33	■■■□□ 2.13
TCF12-222	ENST00000561152	AGMO	Q6ZNB7	445 aa		28.33	■■■□□ 2.13
TCF12-222	ENST00000561152	CDR2L	Q86X02	465 aa	Predicted RBP	28.33	■■■□□ 2.13
TCF12-222	ENST00000561152	FAM178B	Q8IXR5	827 aa		28.33	■■■□□ 2.13
TCF12-222	ENST00000561152	GDPD5	Q8WTR4	605 aa		28.33	■■■□□ 2.13
TCF12-222	ENST00000561152	KCNN1	Q92952	543 aa		28.33	■■■□□ 2.13
TCF12-222	ENST00000561152	P2RX5	Q93086	422 aa		28.33	■■■□□ 2.13
TCF12-222	ENST00000561152	SEL1L	Q9UBV2	794 aa		28.33	■■■□□ 2.13
TCF12-222	ENST00000561152	KCNH3	Q9ULD8	1083 aa		28.33	■■■□□ 2.13
TCF12-222	ENST00000561152	TNFSF13B	Q9Y275	285 aa		28.33	■■■□□ 2.13
TCF12-222	ENST00000561152	PCDHB12	Q9Y5F1	795 aa		28.33	■■■□□ 2.13
TCF12-222	ENST00000561152	KIAA1671	Q9BY89	1806 aa		28.33	■■■□□ 2.13
TCF12-222	ENST00000561152		K7ENM7	598 aa		28.32	■■■□□ 2.12
TCF12-222	ENST00000561152	OFD1	O75665	1012 aa		28.32	■■■□□ 2.12
TCF12-222	ENST00000561152	MAPT	P10636	758 aa	Known RBP	28.32	■■■□□ 2.12
TCF12-222	ENST00000561152	GAP43	P17677	238 aa		28.32	■■■□□ 2.12
TCF12-222	ENST00000561152	GPM6B	Q13491	265 aa		28.32	■■■□□ 2.12
TCF12-222	ENST00000561152	NOMO2	Q5JPE7	1267 aa		28.32	■■■□□ 2.12
TCF12-222	ENST00000561152	NT5DC1	Q5TFE4	455 aa		28.32	■■■□□ 2.12
TCF12-222	ENST00000561152	HAUS6	Q7Z4H7	955 aa		28.32	■■■□□ 2.12
TCF12-222	ENST00000561152	KBTBD4	Q9NVX7	518 aa		28.32	■■■□□ 2.12
TCF12-222	ENST00000561152	LMCD1	Q9NZU5	365 aa		28.32	■■■□□ 2.12
TCF12-222	ENST00000561152	KANSL3	Q9P2N6	904 aa		28.32	■■■□□ 2.12
TCF12-222	ENST00000561152	CARNS1	A5YM72	827 aa		28.31	■■■□□ 2.12
TCF12-222	ENST00000561152	TTLL13P	A6NNM8	815 aa		28.31	■■■□□ 2.12
TCF12-222	ENST00000561152	EDN1	P05305	212 aa		28.31	■■■□□ 2.12
TCF12-222	ENST00000561152	POU3F3	P20264	500 aa	Predicted RBP	28.31	■■■□□ 2.12
TCF12-222	ENST00000561152	ADGRE1	Q14246	886 aa		28.31	■■■□□ 2.12
TCF12-222	ENST00000561152	TAS1R3	Q7RTX0	852 aa		28.31	■■■□□ 2.12
TCF12-222	ENST00000561152	DNAJC19	Q96DA6	116 aa		28.31	■■■□□ 2.12
TCF12-222	ENST00000561152	ACO2	Q99798	780 aa	Known RBP	28.31	■■■□□ 2.12
TCF12-222	ENST00000561152	NXF3	Q9H4D5	531 aa	Known RBP	28.31	■■■□□ 2.12
TCF12-222	ENST00000561152	CWH43	Q9H720	699 aa		28.31	■■■□□ 2.12
TCF12-222	ENST00000561152	INPP5F	Q9Y2H2	1132 aa		28.31	■■■□□ 2.12
TCF12-222	ENST00000561152	GIT1	Q9Y2X7	761 aa		28.31	■■■□□ 2.12
TCF12-222	ENST00000561152	ZMYM2	Q9UBW7	1377 aa		28.3	■■■□□ 2.12
TCF12-222	ENST00000561152	MEIS3P2	A8K0S8	358 aa		28.3	■■■□□ 2.12
TCF12-222	ENST00000561152	PTPRO	Q16827	1216 aa		28.3	■■■□□ 2.12
TCF12-222	ENST00000561152	CEP57L1	Q8IYX8	460 aa		28.3	■■■□□ 2.12
TCF12-222	ENST00000561152	APOL6	Q9BWW8	343 aa		28.3	■■■□□ 2.12
TCF12-222	ENST00000561152	HES2	Q9Y543	173 aa		28.3	■■■□□ 2.12
TCF12-222	ENST00000561152	IDE	P14735	1019 aa		28.29	■■■□□ 2.12
TCF12-222	ENST00000561152	RNASEL	Q05823	741 aa	Known RBP	28.29	■■■□□ 2.12
TCF12-222	ENST00000561152	ZPBP2	Q6X784	338 aa		28.29	■■■□□ 2.12
TCF12-222	ENST00000561152	LRRC55	Q6ZSA7	311 aa		28.29	■■■□□ 2.12
TCF12-222	ENST00000561152	CCDC65	Q8IXS2	484 aa		28.29	■■■□□ 2.12
TCF12-222	ENST00000561152	TARS2	Q9BW92	718 aa	Known RBP	28.29	■■■□□ 2.12
TCF12-222	ENST00000561152	USP25	Q9UHP3	1055 aa		28.29	■■■□□ 2.12
TCF12-222	ENST00000561152	USP20	Q9Y2K6	914 aa		28.29	■■■□□ 2.12
TCF12-222	ENST00000561152		A0A1W2PQ27	194 aa		28.28	■■■□□ 2.12
TCF12-222	ENST00000561152		A0A1W2PQ64	194 aa		28.28	■■■□□ 2.12
TCF12-222	ENST00000561152		A0A1W2PQD8	194 aa		28.28	■■■□□ 2.12
TCF12-222	ENST00000561152	LPXN	O60711	386 aa		28.28	■■■□□ 2.12
TCF12-222	ENST00000561152	PFKFB1	P16118	471 aa		28.28	■■■□□ 2.12
TCF12-222	ENST00000561152	ZNF568	Q3ZCX4	644 aa		28.28	■■■□□ 2.12
TCF12-222	ENST00000561152	EEF1DP3	Q658K8	133 aa		28.28	■■■□□ 2.12
TCF12-222	ENST00000561152	SFR1	Q86XK3	245 aa		28.28	■■■□□ 2.12
TCF12-222	ENST00000561152	COLGALT1	Q8NBJ5	622 aa		28.28	■■■□□ 2.12
TCF12-222	ENST00000561152	BICD1	Q96G01	975 aa		28.28	■■■□□ 2.12
TCF12-222	ENST00000561152	ZNF558	Q96NG5	402 aa		28.28	■■■□□ 2.12
TCF12-222	ENST00000561152	TCHP	Q9BT92	498 aa		28.28	■■■□□ 2.12
TCF12-222	ENST00000561152	LMAN2L	Q9H0V9	348 aa		28.28	■■■□□ 2.12
TCF12-222	ENST00000561152	ST6GALNAC4	Q9H4F1	302 aa		28.28	■■■□□ 2.12
TCF12-222	ENST00000561152	GDPD2	Q9HCC8	539 aa		28.28	■■■□□ 2.12
TCF12-222	ENST00000561152	TBC1D13	Q9NVG8	400 aa		28.28	■■■□□ 2.12
TCF12-222	ENST00000561152	PARP2	Q9UGN5	583 aa		28.28	■■■□□ 2.12

Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms