RNA–Protein interactions for RNA: ENST00000561010.5

GABPB1-211, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-211ENST00000561010 FAM50BQ9Y247 325 aa8.14□□□□□ -1.11
GABPB1-211ENST00000561010 PDCD11Q14690 1871 aaKnown RBP8.14□□□□□ -1.11
GABPB1-211ENST00000561010 A0A087WZ62 844 aa8.13□□□□□ -1.11
GABPB1-211ENST00000561010 M0R2N6 131 aa8.13□□□□□ -1.11
GABPB1-211ENST00000561010 FSCN2O14926 492 aa8.13□□□□□ -1.11
GABPB1-211ENST00000561010 MAGEB2O15479 319 aa8.13□□□□□ -1.11
GABPB1-211ENST00000561010 NCK2O43639 380 aa8.13□□□□□ -1.11
GABPB1-211ENST00000561010 B4GALT3O60512 393 aa8.13□□□□□ -1.11
GABPB1-211ENST00000561010 REC8O95072 547 aa8.13□□□□□ -1.11
GABPB1-211ENST00000561010 EYA4O95677 639 aa8.13□□□□□ -1.11
GABPB1-211ENST00000561010 WEE2P0C1S8 567 aa8.13□□□□□ -1.11
GABPB1-211ENST00000561010 ALADP13716 330 aa8.13□□□□□ -1.11
GABPB1-211ENST00000561010 DARSP14868 501 aaKnown RBP8.13□□□□□ -1.11
GABPB1-211ENST00000561010 EIF4BP23588 611 aaKnown RBP8.13□□□□□ -1.11
GABPB1-211ENST00000561010 PSMA5P28066 241 aa8.13□□□□□ -1.11
GABPB1-211ENST00000561010 CA8P35219 290 aa8.13□□□□□ -1.11
GABPB1-211ENST00000561010 NPEPPSP55786 919 aa8.13□□□□□ -1.11
GABPB1-211ENST00000561010 EVCP57679 992 aa8.13□□□□□ -1.11
GABPB1-211ENST00000561010 RAB15P59190 212 aa8.13□□□□□ -1.11
GABPB1-211ENST00000561010 TBC1D8BQ0IIM8 1120 aa8.13□□□□□ -1.11
GABPB1-211ENST00000561010 NR5A1Q13285 461 aa8.13□□□□□ -1.11
GABPB1-211ENST00000561010 TARBP2Q15633 366 aaKnown RBP8.13□□□□□ -1.11
GABPB1-211ENST00000561010 DUSP6Q16828 381 aa8.13□□□□□ -1.11
GABPB1-211ENST00000561010 NAALADL2Q58DX5 795 aa8.13□□□□□ -1.11
GABPB1-211ENST00000561010 KCNT2Q6UVM3 1135 aa8.13□□□□□ -1.11
GABPB1-211ENST00000561010 ALYREFQ86V81 257 aaKnown RBP8.13□□□□□ -1.11
GABPB1-211ENST00000561010 TMEM173Q86WV6 379 aaPredicted RBP8.13□□□□□ -1.11
GABPB1-211ENST00000561010 TEX2Q8IWB9 1127 aa8.13□□□□□ -1.11
GABPB1-211ENST00000561010 FBXL16Q8N461 479 aa8.13□□□□□ -1.11
GABPB1-211ENST00000561010 ETNPPLQ8TBG4 499 aa8.13□□□□□ -1.11
GABPB1-211ENST00000561010 BICD2Q8TD16 824 aa8.13□□□□□ -1.11
GABPB1-211ENST00000561010 FAM167AQ96KS9 214 aa8.13□□□□□ -1.11
GABPB1-211ENST00000561010 TCF25Q9BQ70 676 aa8.13□□□□□ -1.11
GABPB1-211ENST00000561010 FDXACB1Q9BRP7 624 aaPredicted RBP8.13□□□□□ -1.11
GABPB1-211ENST00000561010 TMEM117Q9H0C3 514 aa8.13□□□□□ -1.11
GABPB1-211ENST00000561010 ENTPD7Q9NQZ7 604 aa8.13□□□□□ -1.11
GABPB1-211ENST00000561010 NRBP2Q9NSY0 501 aa8.13□□□□□ -1.11
GABPB1-211ENST00000561010 WRAP73Q9P2S5 460 aaPredicted RBP8.13□□□□□ -1.11
GABPB1-211ENST00000561010 CEP131Q9UPN4 1083 aa8.13□□□□□ -1.11
GABPB1-211ENST00000561010 CYP46A1Q9Y6A2 500 aa8.13□□□□□ -1.11
GABPB1-211ENST00000561010 MIA3Q5JRA6 1907 aa8.13□□□□□ -1.11
GABPB1-211ENST00000561010 NOTCH4Q99466 2003 aa8.12□□□□□ -1.11
GABPB1-211ENST00000561010 LOC730098B7Z3J9 87 aa8.12□□□□□ -1.11
GABPB1-211ENST00000561010 CPLX1O14810 134 aa8.12□□□□□ -1.11
GABPB1-211ENST00000561010 ZBTB39O15060 712 aa8.12□□□□□ -1.11
GABPB1-211ENST00000561010 ZSCAN20P17040 1043 aaPredicted RBP8.12□□□□□ -1.11
GABPB1-211ENST00000561010 LAG3P18627 525 aa8.12□□□□□ -1.11
GABPB1-211ENST00000561010 TMOD1P28289 359 aa8.12□□□□□ -1.11
GABPB1-211ENST00000561010 TECP42680 631 aa8.12□□□□□ -1.11
GABPB1-211ENST00000561010 SMCPP49901 116 aaPredicted RBP8.12□□□□□ -1.11
GABPB1-211ENST00000561010 USP11P51784 963 aa8.12□□□□□ -1.11
GABPB1-211ENST00000561010 JAK3P52333 1124 aa8.12□□□□□ -1.11
GABPB1-211ENST00000561010 SCRN1Q12765 414 aa8.12□□□□□ -1.11
GABPB1-211ENST00000561010 COASYQ13057 564 aa8.12□□□□□ -1.11
GABPB1-211ENST00000561010 LETM2Q2VYF4 491 aa8.12□□□□□ -1.11
GABPB1-211ENST00000561010 Q4G0T1 1027 aa8.12□□□□□ -1.11
GABPB1-211ENST00000561010 EARS2Q5JPH6 523 aaKnown RBP8.12□□□□□ -1.11
GABPB1-211ENST00000561010 INTS6LQ5JSJ4 861 aaKnown RBP8.12□□□□□ -1.11
GABPB1-211ENST00000561010 ODR4Q5SWX8 454 aa8.12□□□□□ -1.11
GABPB1-211ENST00000561010 MCTP2Q6DN12 878 aa8.12□□□□□ -1.11
GABPB1-211ENST00000561010 SYCE2Q6PIF2 218 aa8.12□□□□□ -1.11
GABPB1-211ENST00000561010 ANO5Q75V66 913 aa8.12□□□□□ -1.11
GABPB1-211ENST00000561010 RHPN2Q8IUC4 686 aa8.12□□□□□ -1.11
GABPB1-211ENST00000561010 TRIM22Q8IYM9 498 aa8.12□□□□□ -1.11
GABPB1-211ENST00000561010 ABI1Q8IZP0 508 aa8.12□□□□□ -1.11
GABPB1-211ENST00000561010 BCL7CQ8WUZ0 217 aaPredicted RBP8.12□□□□□ -1.11
GABPB1-211ENST00000561010 MRPS27Q92552 414 aaKnown RBP8.12□□□□□ -1.11
GABPB1-211ENST00000561010 PPP2R3CQ969Q6 453 aa8.12□□□□□ -1.11
GABPB1-211ENST00000561010 FBXL18Q96ME1 805 aa8.12□□□□□ -1.11
GABPB1-211ENST00000561010 NLRP4Q96MN2 994 aa8.12□□□□□ -1.11
GABPB1-211ENST00000561010 ZNF558Q96NG5 402 aa8.12□□□□□ -1.11
GABPB1-211ENST00000561010 RIT2Q99578 217 aa8.12□□□□□ -1.11
GABPB1-211ENST00000561010 GBP3Q9H0R5 595 aa8.12□□□□□ -1.11
GABPB1-211ENST00000561010 SMOC2Q9H3U7 446 aa8.12□□□□□ -1.11
GABPB1-211ENST00000561010 ELAC1Q9H777 363 aaKnown RBP8.12□□□□□ -1.11
GABPB1-211ENST00000561010 SH3GLB2Q9NR46 395 aa8.12□□□□□ -1.11
GABPB1-211ENST00000561010 PDRG1Q9NUG6 133 aa8.12□□□□□ -1.11
GABPB1-211ENST00000561010 DDX25Q9UHL0 483 aaKnown RBP8.12□□□□□ -1.11
GABPB1-211ENST00000561010 INPP5FQ9Y2H2 1132 aa8.12□□□□□ -1.11
GABPB1-211ENST00000561010 SPTBN4Q9H254 2564 aa8.11□□□□□ -1.11
GABPB1-211ENST00000561010 A0A087WWV3 80 aa8.11□□□□□ -1.11
GABPB1-211ENST00000561010 ESPNB1AK53 854 aa8.11□□□□□ -1.11
GABPB1-211ENST00000561010 ZC3H11AO75152 810 aaKnown RBP eCLIP8.11□□□□□ -1.11
GABPB1-211ENST00000561010 DEXIO95424 95 aa8.11□□□□□ -1.11
GABPB1-211ENST00000561010 LARGE1O95461 756 aa8.11□□□□□ -1.11
GABPB1-211ENST00000561010 CTDNEP1O95476 244 aa8.11□□□□□ -1.11
GABPB1-211ENST00000561010 SNRPBP14678 240 aaKnown RBP8.11□□□□□ -1.11
GABPB1-211ENST00000561010 SFNP31947 248 aa8.11□□□□□ -1.11
GABPB1-211ENST00000561010 AFF1P51825 1210 aaKnown RBP8.11□□□□□ -1.11
GABPB1-211ENST00000561010 BCAR1P56945 870 aa8.11□□□□□ -1.11
GABPB1-211ENST00000561010 UBE3AQ05086 875 aa8.11□□□□□ -1.11
GABPB1-211ENST00000561010 DHX9Q08211 1270 aaKnown RBP8.11□□□□□ -1.11
GABPB1-211ENST00000561010 KCNC3Q14003 757 aa8.11□□□□□ -1.11
GABPB1-211ENST00000561010 NONOQ15233 471 aaKnown RBP eCLIP8.11□□□□□ -1.11
GABPB1-211ENST00000561010 HERC4Q5GLZ8 1057 aaPredicted RBP8.11□□□□□ -1.11
GABPB1-211ENST00000561010 TWF2Q6IBS0 349 aaKnown RBP8.11□□□□□ -1.11
GABPB1-211ENST00000561010 ANKRD54Q6NXT1 300 aa8.11□□□□□ -1.11
GABPB1-211ENST00000561010 B3GNT9Q6UX72 402 aa8.11□□□□□ -1.11
GABPB1-211ENST00000561010 TMC7Q7Z402 723 aa8.11□□□□□ -1.11
GABPB1-211ENST00000561010 SLC39A11Q8N1S5 342 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms