RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 LONRF3Q496Y0 759 aa11.95□□□□□ -0.5
TPM1-227ENST00000560970 LARP1BQ659C4 914 aaKnown RBP11.95□□□□□ -0.5
TPM1-227ENST00000560970 MCTP1Q6DN14 999 aa11.95□□□□□ -0.5
TPM1-227ENST00000560970 NCAPH2Q6IBW4 605 aa11.95□□□□□ -0.5
TPM1-227ENST00000560970 CCDC149Q6ZUS6 474 aa11.95□□□□□ -0.5
TPM1-227ENST00000560970 CABP7Q86V35 215 aa11.95□□□□□ -0.5
TPM1-227ENST00000560970 KSR1Q8IVT5 923 aa11.95□□□□□ -0.5
TPM1-227ENST00000560970 SLC22A17Q8WUG5 538 aa11.95□□□□□ -0.5
TPM1-227ENST00000560970 PSPC1Q8WXF1 523 aaKnown RBP11.95□□□□□ -0.5
TPM1-227ENST00000560970 ATOH1Q92858 354 aaPredicted RBP11.95□□□□□ -0.5
TPM1-227ENST00000560970 VN1R3Q9BXE9 311 aa11.95□□□□□ -0.5
TPM1-227ENST00000560970 GBP3Q9H0R5 595 aa11.95□□□□□ -0.5
TPM1-227ENST00000560970 SMOC2Q9H3U7 446 aa11.95□□□□□ -0.5
TPM1-227ENST00000560970 RSAD1Q9HA92 442 aa11.95□□□□□ -0.5
TPM1-227ENST00000560970 IFT122Q9HBG6 1241 aa11.95□□□□□ -0.5
TPM1-227ENST00000560970 PCDHB6Q9Y5E3 794 aa11.95□□□□□ -0.5
TPM1-227ENST00000560970 PDCD11Q14690 1871 aaKnown RBP11.95□□□□□ -0.5
TPM1-227ENST00000560970 POTEMA6NI47 508 aa11.94□□□□□ -0.5
TPM1-227ENST00000560970 DDX11L8A8MPP1 907 aa11.94□□□□□ -0.5
TPM1-227ENST00000560970 H3BQV1 296 aa11.94□□□□□ -0.5
TPM1-227ENST00000560970 GAS2O43903 313 aaKnown RBP11.94□□□□□ -0.5
TPM1-227ENST00000560970 OFD1O75665 1012 aa11.94□□□□□ -0.5
TPM1-227ENST00000560970 ASGR2P07307 311 aa11.94□□□□□ -0.5
TPM1-227ENST00000560970 RFC5P40937 340 aa11.94□□□□□ -0.5
TPM1-227ENST00000560970 QARSP47897 775 aaKnown RBP11.94□□□□□ -0.5
TPM1-227ENST00000560970 TRAPPC10P48553 1259 aa11.94□□□□□ -0.5
TPM1-227ENST00000560970 ATAT1Q5SQI0 421 aa11.94□□□□□ -0.5
TPM1-227ENST00000560970 HSCBQ8IWL3 235 aa11.94□□□□□ -0.5
TPM1-227ENST00000560970 SLFN12Q8IYM2 578 aa11.94□□□□□ -0.5
TPM1-227ENST00000560970 PLCD3Q8N3E9 789 aa11.94□□□□□ -0.5
TPM1-227ENST00000560970 C12orf76Q8N812 135 aaPredicted RBP11.94□□□□□ -0.5
TPM1-227ENST00000560970 C4orf32Q8N8J7 132 aa11.94□□□□□ -0.5
TPM1-227ENST00000560970 TMEM105Q8N8V8 129 aa11.94□□□□□ -0.5
TPM1-227ENST00000560970 INTS4Q96HW7 963 aaKnown RBP11.94□□□□□ -0.5
TPM1-227ENST00000560970 LXNQ9BS40 222 aa11.94□□□□□ -0.5
TPM1-227ENST00000560970 TMEM175Q9BSA9 504 aa11.94□□□□□ -0.5
TPM1-227ENST00000560970 EMILIN2Q9BXX0 1053 aa11.94□□□□□ -0.5
TPM1-227ENST00000560970 PCDHB2Q9Y5E7 798 aa11.94□□□□□ -0.5
TPM1-227ENST00000560970 TRIP11Q15643 1979 aa11.94□□□□□ -0.5
TPM1-227ENST00000560970 VPS37CA5D8V6 355 aaPredicted RBP11.93□□□□□ -0.5
TPM1-227ENST00000560970 MARCH6O60337 910 aa11.93□□□□□ -0.5
TPM1-227ENST00000560970 BAG4O95429 457 aaKnown RBP11.93□□□□□ -0.5
TPM1-227ENST00000560970 URODP06132 367 aa11.93□□□□□ -0.5
TPM1-227ENST00000560970 OR52Z1P0C646 297 aa11.93□□□□□ -0.5
TPM1-227ENST00000560970 TXKP42681 527 aa11.93□□□□□ -0.5
TPM1-227ENST00000560970 CLCN4P51793 760 aa11.93□□□□□ -0.5
TPM1-227ENST00000560970 EMC2Q15006 297 aa11.93□□□□□ -0.5
TPM1-227ENST00000560970 TMC5Q6UXY8 1006 aa11.93□□□□□ -0.5
TPM1-227ENST00000560970 AGMOQ6ZNB7 445 aa11.93□□□□□ -0.5
TPM1-227ENST00000560970 SRGAP1Q7Z6B7 1085 aa11.93□□□□□ -0.5
TPM1-227ENST00000560970 EXOC8Q8IYI6 725 aa11.93□□□□□ -0.5
TPM1-227ENST00000560970 ACSF2Q96CM8 615 aaPredicted RBP11.93□□□□□ -0.5
TPM1-227ENST00000560970 DYDC2Q96IM9 177 aa11.93□□□□□ -0.5
TPM1-227ENST00000560970 HERC2P3Q9BVR0 1158 aa11.93□□□□□ -0.5
TPM1-227ENST00000560970 MFSD1Q9H3U5 465 aa11.93□□□□□ -0.5
TPM1-227ENST00000560970 DHX33Q9H6R0 707 aaKnown RBP11.93□□□□□ -0.5
TPM1-227ENST00000560970 TTC12Q9H892 705 aaPredicted RBP11.93□□□□□ -0.5
TPM1-227ENST00000560970 RGL1Q9NZL6 768 aa11.93□□□□□ -0.5
TPM1-227ENST00000560970 NOL7Q9UMY1 257 aaKnown RBP11.93□□□□□ -0.5
TPM1-227ENST00000560970 ZFHX2Q9C0A1 2572 aaPredicted RBP11.92□□□□□ -0.5
TPM1-227ENST00000560970 PROB1E7EW31 1015 aa11.92□□□□□ -0.5
TPM1-227ENST00000560970 H0Y858 1186 aa11.92□□□□□ -0.5
TPM1-227ENST00000560970 ERLIN2O94905 339 aa11.92□□□□□ -0.5
TPM1-227ENST00000560970 SSBP05455 408 aaKnown RBP eCLIP11.92□□□□□ -0.5
TPM1-227ENST00000560970 SYT1P21579 422 aa11.92□□□□□ -0.5
TPM1-227ENST00000560970 NPEPPSP55786 919 aa11.92□□□□□ -0.5
TPM1-227ENST00000560970 CYP4A11Q02928 519 aa11.92□□□□□ -0.5
TPM1-227ENST00000560970 RESTQ13127 1097 aa11.92□□□□□ -0.5
TPM1-227ENST00000560970 ORC2Q13416 577 aaPredicted RBP11.92□□□□□ -0.5
TPM1-227ENST00000560970 CTTNQ14247 550 aaKnown RBP11.92□□□□□ -0.5
TPM1-227ENST00000560970 EPHA7Q15375 998 aa11.92□□□□□ -0.5
TPM1-227ENST00000560970 CWF19L1Q69YN2 538 aaKnown RBP11.92□□□□□ -0.5
TPM1-227ENST00000560970 ASTLQ6HA08 431 aaPredicted RBP11.92□□□□□ -0.5
TPM1-227ENST00000560970 KANK3Q6NY19 840 aa11.92□□□□□ -0.5
TPM1-227ENST00000560970 ELMSAN1Q6PJG2 1045 aa11.92□□□□□ -0.5
TPM1-227ENST00000560970 C15orf39Q6ZRI6 1047 aa11.92□□□□□ -0.5
TPM1-227ENST00000560970 OTOP3Q7RTS5 596 aa11.92□□□□□ -0.5
TPM1-227ENST00000560970 GPR149Q86SP6 731 aa11.92□□□□□ -0.5
TPM1-227ENST00000560970 FERMT3Q86UX7 667 aa11.92□□□□□ -0.5
TPM1-227ENST00000560970 ZNF280BQ86YH2 543 aa11.92□□□□□ -0.5
TPM1-227ENST00000560970 TCP11Q8WWU5 503 aa11.92□□□□□ -0.5
TPM1-227ENST00000560970 CEP170P1Q96L14 293 aa11.92□□□□□ -0.5
TPM1-227ENST00000560970 FAM193BQ96PV7 902 aaPredicted RBP11.92□□□□□ -0.5
TPM1-227ENST00000560970 EIF2AK1Q9BQI3 630 aaKnown RBP11.92□□□□□ -0.5
TPM1-227ENST00000560970 MAN1C1Q9NR34 630 aa11.92□□□□□ -0.5
TPM1-227ENST00000560970 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.92□□□□□ -0.5
TPM1-227ENST00000560970 MRPL17Q9NRX2 175 aaKnown RBP11.92□□□□□ -0.5
TPM1-227ENST00000560970 BMP2KQ9NSY1 1161 aaPredicted RBP11.92□□□□□ -0.5
TPM1-227ENST00000560970 MARCH5Q9NX47 278 aa11.92□□□□□ -0.5
TPM1-227ENST00000560970 KANSL3Q9P2N6 904 aa11.92□□□□□ -0.5
TPM1-227ENST00000560970 PCDHA12Q9UN75 941 aa11.92□□□□□ -0.5
TPM1-227ENST00000560970 DUSP12Q9UNI6 340 aa11.92□□□□□ -0.5
TPM1-227ENST00000560970 ZMYM2Q9UBW7 1377 aa11.92□□□□□ -0.5
TPM1-227ENST00000560970 SPTBN4Q9H254 2564 aa11.91□□□□□ -0.5
TPM1-227ENST00000560970 CITO14578 2027 aa11.91□□□□□ -0.5
TPM1-227ENST00000560970 DDHD2O94830 711 aa11.91□□□□□ -0.5
TPM1-227ENST00000560970 SOD2P04179 222 aa11.91□□□□□ -0.5
TPM1-227ENST00000560970 P4HBP07237 508 aaKnown RBP11.91□□□□□ -0.5
TPM1-227ENST00000560970 ADH1AP07327 375 aa11.91□□□□□ -0.5
TPM1-227ENST00000560970 CNPP09543 421 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms