RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 ABHD15Q6UXT9 468 aa10.79□□□□□ -0.68
HERC1-210ENST00000560897 CATIPQ7Z7H3 387 aa10.79□□□□□ -0.68
HERC1-210ENST00000560897 FAM167AQ96KS9 214 aa10.79□□□□□ -0.68
HERC1-210ENST00000560897 TRAIPQ9BWF2 469 aa10.79□□□□□ -0.68
HERC1-210ENST00000560897 LMAN1LQ9HAT1 526 aa10.79□□□□□ -0.68
HERC1-210ENST00000560897 AGO4Q9HCK5 861 aaKnown RBP10.79□□□□□ -0.68
HERC1-210ENST00000560897 RXFP3Q9NSD7 469 aa10.79□□□□□ -0.68
HERC1-210ENST00000560897 ECI2O75521 394 aa10.78□□□□□ -0.68
HERC1-210ENST00000560897 DDHD2O94830 711 aa10.78□□□□□ -0.68
HERC1-210ENST00000560897 HNRNPA1P09651 372 aaKnown RBP eCLIP10.78□□□□□ -0.68
HERC1-210ENST00000560897 ZNF76P36508 570 aa10.78□□□□□ -0.68
HERC1-210ENST00000560897 CDC42EP1Q00587 391 aa10.78□□□□□ -0.68
HERC1-210ENST00000560897 ITGB3BPQ13352 177 aaPredicted RBP10.78□□□□□ -0.68
HERC1-210ENST00000560897 FZD5Q13467 585 aa10.78□□□□□ -0.68
HERC1-210ENST00000560897 SART3Q15020 963 aaKnown RBP10.78□□□□□ -0.68
HERC1-210ENST00000560897 CEP55Q53EZ4 464 aa10.78□□□□□ -0.68
HERC1-210ENST00000560897 PPM1LQ5SGD2 360 aa10.78□□□□□ -0.68
HERC1-210ENST00000560897 DAB2IPQ5VWQ8 1189 aa10.78□□□□□ -0.68
HERC1-210ENST00000560897 FAM3CQ92520 227 aa10.78□□□□□ -0.68
HERC1-210ENST00000560897 GATA6Q92908 595 aa10.78□□□□□ -0.68
HERC1-210ENST00000560897 LOXL4Q96JB6 756 aa10.78□□□□□ -0.68
HERC1-210ENST00000560897 SCNM1Q9BWG6 230 aa10.78□□□□□ -0.68
HERC1-210ENST00000560897 TMEM121BQ9BXQ6 578 aaPredicted RBP10.78□□□□□ -0.68
HERC1-210ENST00000560897 INO80BQ9C086 356 aaPredicted RBP10.78□□□□□ -0.68
HERC1-210ENST00000560897 BRD9Q9H8M2 597 aa10.78□□□□□ -0.68
HERC1-210ENST00000560897 RSAD1Q9HA92 442 aa10.78□□□□□ -0.68
HERC1-210ENST00000560897 LY9Q9HBG7 655 aa10.78□□□□□ -0.68
HERC1-210ENST00000560897 CNTNAP2Q9UHC6 1331 aa10.78□□□□□ -0.68
HERC1-210ENST00000560897 MEIS3P2A8K0S8 358 aa10.77□□□□□ -0.69
HERC1-210ENST00000560897 IFIT3O14879 490 aaKnown RBP10.77□□□□□ -0.69
HERC1-210ENST00000560897 B4GALT3O60512 393 aa10.77□□□□□ -0.69
HERC1-210ENST00000560897 CSDE1O75534 798 aaKnown RBP10.77□□□□□ -0.69
HERC1-210ENST00000560897 CCNE2O96020 404 aa10.77□□□□□ -0.69
HERC1-210ENST00000560897 POMCP01189 267 aa10.77□□□□□ -0.69
HERC1-210ENST00000560897 NTHL1P78549 312 aa10.77□□□□□ -0.69
HERC1-210ENST00000560897 LRRC32Q14392 662 aa10.77□□□□□ -0.69
HERC1-210ENST00000560897 SOWAHCQ53LP3 525 aaPredicted RBP10.77□□□□□ -0.69
HERC1-210ENST00000560897 TAS1R1Q7RTX1 841 aa10.77□□□□□ -0.69
HERC1-210ENST00000560897 CATSPER4Q7RTX7 472 aa10.77□□□□□ -0.69
HERC1-210ENST00000560897 CTCFLQ8NI51 663 aaPredicted RBP10.77□□□□□ -0.69
HERC1-210ENST00000560897 SPZ1Q9BXG8 430 aa10.77□□□□□ -0.69
HERC1-210ENST00000560897 MARCH5Q9NX47 278 aa10.77□□□□□ -0.69
HERC1-210ENST00000560897 ASH1LQ9NR48 2969 aaKnown RBP10.76□□□□□ -0.69
HERC1-210ENST00000560897 CCL16O15467 120 aa10.76□□□□□ -0.69
HERC1-210ENST00000560897 ZNF623O75123 536 aa10.76□□□□□ -0.69
HERC1-210ENST00000560897 EPN2O95208 641 aa10.76□□□□□ -0.69
HERC1-210ENST00000560897 SEC24BO95487 1268 aa10.76□□□□□ -0.69
HERC1-210ENST00000560897 C8AP07357 584 aa10.76□□□□□ -0.69
HERC1-210ENST00000560897 PSAPP07602 524 aa10.76□□□□□ -0.69
HERC1-210ENST00000560897 HNRNPUQ00839 825 aaKnown RBP eCLIP10.76□□□□□ -0.69
HERC1-210ENST00000560897 USP41Q3LFD5 358 aa10.76□□□□□ -0.69
HERC1-210ENST00000560897 PABPC1LQ4VXU2 614 aaKnown RBP10.76□□□□□ -0.69
HERC1-210ENST00000560897 SH3PXD2AQ5TCZ1 1133 aa10.76□□□□□ -0.69
HERC1-210ENST00000560897 CACNA2D4Q7Z3S7 1137 aa10.76□□□□□ -0.69
HERC1-210ENST00000560897 NPAS3Q8IXF0 933 aa10.76□□□□□ -0.69
HERC1-210ENST00000560897 SPEM1Q8N4L4 309 aa10.76□□□□□ -0.69
HERC1-210ENST00000560897 ITFG1Q8TB96 612 aa10.76□□□□□ -0.69
HERC1-210ENST00000560897 RILPL2Q969X0 211 aa10.76□□□□□ -0.69
HERC1-210ENST00000560897 LZTS2Q9BRK4 669 aa10.76□□□□□ -0.69
HERC1-210ENST00000560897 EDEM2Q9BV94 578 aa10.76□□□□□ -0.69
HERC1-210ENST00000560897 FNIP2Q9P278 1114 aa10.76□□□□□ -0.69
HERC1-210ENST00000560897 KCNH3Q9ULD8 1083 aa10.76□□□□□ -0.69
HERC1-210ENST00000560897 MRPS23Q9Y3D9 190 aaKnown RBP10.76□□□□□ -0.69
HERC1-210ENST00000560897 SAMM50Q9Y512 469 aa10.76□□□□□ -0.69
HERC1-210ENST00000560897 PCDHB2Q9Y5E7 798 aa10.76□□□□□ -0.69
HERC1-210ENST00000560897 PCDHGA5Q9Y5G8 931 aa10.76□□□□□ -0.69
HERC1-210ENST00000560897 MAFBQ9Y5Q3 323 aaPredicted RBP10.76□□□□□ -0.69
HERC1-210ENST00000560897 ADAMTS20P59510 1910 aa10.76□□□□□ -0.69
HERC1-210ENST00000560897 GIPC1O14908 333 aa10.75□□□□□ -0.69
HERC1-210ENST00000560897 CCDC192P0DO97 292 aa10.75□□□□□ -0.69
HERC1-210ENST00000560897 RPL17P18621 184 aaKnown RBP10.75□□□□□ -0.69
HERC1-210ENST00000560897 ATP4AP20648 1035 aa10.75□□□□□ -0.69
HERC1-210ENST00000560897 MPLP40238 635 aa10.75□□□□□ -0.69
HERC1-210ENST00000560897 TROAPQ12815 778 aa10.75□□□□□ -0.69
HERC1-210ENST00000560897 CYB5R4Q7L1T6 521 aa10.75□□□□□ -0.69
HERC1-210ENST00000560897 PDZD3Q86UT5 571 aa10.75□□□□□ -0.69
HERC1-210ENST00000560897 SMAP1Q8IYB5 467 aaPredicted RBP10.75□□□□□ -0.69
HERC1-210ENST00000560897 GPR65Q8IYL9 337 aa10.75□□□□□ -0.69
HERC1-210ENST00000560897 LINC01465Q8N7H1 131 aa10.75□□□□□ -0.69
HERC1-210ENST00000560897 ING5Q8WYH8 240 aa10.75□□□□□ -0.69
HERC1-210ENST00000560897 IRF7Q92985 503 aa10.75□□□□□ -0.69
HERC1-210ENST00000560897 YTHDC1Q96MU7 727 aaKnown RBP10.75□□□□□ -0.69
HERC1-210ENST00000560897 COLEC11Q9BWP8 271 aa10.75□□□□□ -0.69
HERC1-210ENST00000560897 VPS45Q9NRW7 570 aa10.75□□□□□ -0.69
HERC1-210ENST00000560897 NRBP2Q9NSY0 501 aa10.75□□□□□ -0.69
HERC1-210ENST00000560897 GDE1Q9NZC3 331 aa10.75□□□□□ -0.69
HERC1-210ENST00000560897 GABBR1Q9UBS5 961 aa10.75□□□□□ -0.69
HERC1-210ENST00000560897 FBXW11Q9UKB1 542 aa10.75□□□□□ -0.69
HERC1-210ENST00000560897 PIAS3Q9Y6X2 628 aa10.75□□□□□ -0.69
HERC1-210ENST00000560897 WDFY3Q8IZQ1 3526 aa10.75□□□□□ -0.69
HERC1-210ENST00000560897 SMG1Q96Q15 3661 aaKnown RBP10.75□□□□□ -0.69
HERC1-210ENST00000560897 C4orf47A7E2U8 309 aa10.74□□□□□ -0.69
HERC1-210ENST00000560897 RPP40O75818 363 aaKnown RBP10.74□□□□□ -0.69
HERC1-210ENST00000560897 PAPSS2O95340 614 aaPredicted RBP10.74□□□□□ -0.69
HERC1-210ENST00000560897 HOXA9P31269 272 aa10.74□□□□□ -0.69
HERC1-210ENST00000560897 GNAQP50148 359 aa10.74□□□□□ -0.69
HERC1-210ENST00000560897 DNM2P50570 870 aa10.74□□□□□ -0.69
HERC1-210ENST00000560897 ZNF746Q6NUN9 644 aaPredicted RBP10.74□□□□□ -0.69
HERC1-210ENST00000560897 KIAA1211LQ6NV74 962 aa10.74□□□□□ -0.69
HERC1-210ENST00000560897 FUT10Q6P4F1 479 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms