RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 TAF3Q5VWG9 929 aa10.51□□□□□ -0.73
RTF1-206ENST00000560447 KRT39Q6A163 491 aa10.51□□□□□ -0.73
RTF1-206ENST00000560447 MIS18BP1Q6P0N0 1132 aa10.51□□□□□ -0.73
RTF1-206ENST00000560447 GPC2Q8N158 579 aa10.51□□□□□ -0.73
RTF1-206ENST00000560447 MREGQ8N565 214 aa10.51□□□□□ -0.73
RTF1-206ENST00000560447 LNX1Q8TBB1 728 aaPredicted RBP10.51□□□□□ -0.73
RTF1-206ENST00000560447 WHAMMQ8TF30 809 aa10.51□□□□□ -0.73
RTF1-206ENST00000560447 SCFD2Q8WU76 684 aa10.51□□□□□ -0.73
RTF1-206ENST00000560447 HES6Q96HZ4 224 aa10.51□□□□□ -0.73
RTF1-206ENST00000560447 IFT74Q96LB3 600 aa10.51□□□□□ -0.73
RTF1-206ENST00000560447 MFSD14AQ96MC6 490 aa10.51□□□□□ -0.73
RTF1-206ENST00000560447 AGPAT1Q99943 283 aa10.51□□□□□ -0.73
RTF1-206ENST00000560447 SLC4A5Q9BY07 1137 aa10.51□□□□□ -0.73
RTF1-206ENST00000560447 GPR88Q9GZN0 384 aa10.51□□□□□ -0.73
RTF1-206ENST00000560447 SLITRK6Q9H5Y7 841 aa10.51□□□□□ -0.73
RTF1-206ENST00000560447 TMEM8AQ9HCN3 771 aa10.51□□□□□ -0.73
RTF1-206ENST00000560447 PDE11AQ9HCR9 933 aa10.51□□□□□ -0.73
RTF1-206ENST00000560447 JPH1Q9HDC5 661 aaPredicted RBP10.51□□□□□ -0.73
RTF1-206ENST00000560447 GDF3Q9NR23 364 aa10.51□□□□□ -0.73
RTF1-206ENST00000560447 CYP39A1Q9NYL5 469 aa10.51□□□□□ -0.73
RTF1-206ENST00000560447 GPRC5DQ9NZD1 345 aa10.51□□□□□ -0.73
RTF1-206ENST00000560447 SLC9A2Q9UBY0 812 aa10.51□□□□□ -0.73
RTF1-206ENST00000560447 AJAP1Q9UKB5 411 aaPredicted RBP10.51□□□□□ -0.73
RTF1-206ENST00000560447 AMFRQ9UKV5 643 aa10.51□□□□□ -0.73
RTF1-206ENST00000560447 BCS1LQ9Y276 419 aa10.51□□□□□ -0.73
RTF1-206ENST00000560447 STXBP5LQ9Y2K9 1186 aa10.51□□□□□ -0.73
RTF1-206ENST00000560447 GJA3Q9Y6H8 435 aa10.51□□□□□ -0.73
RTF1-206ENST00000560447 SBF1O95248 1867 aa10.51□□□□□ -0.73
RTF1-206ENST00000560447 LRRC37A2A6NM11 1700 aa10.5□□□□□ -0.73
RTF1-206ENST00000560447 LOC102724159A0A0B4J2E5 919 aa10.5□□□□□ -0.73
RTF1-206ENST00000560447 LRRIQ3A6PVS8 624 aaPredicted RBP10.5□□□□□ -0.73
RTF1-206ENST00000560447 BHMG1C9JSJ3 638 aaPredicted RBP10.5□□□□□ -0.73
RTF1-206ENST00000560447 NCK2O43639 380 aa10.5□□□□□ -0.73
RTF1-206ENST00000560447 OPA1O60313 960 aa10.5□□□□□ -0.73
RTF1-206ENST00000560447 ATP9AO75110 1047 aa10.5□□□□□ -0.73
RTF1-206ENST00000560447 STBD1O95210 358 aa10.5□□□□□ -0.73
RTF1-206ENST00000560447 ATG7O95352 703 aa10.5□□□□□ -0.73
RTF1-206ENST00000560447 ZBTB7AO95365 584 aa10.5□□□□□ -0.73
RTF1-206ENST00000560447 PIGRP01833 764 aa10.5□□□□□ -0.73
RTF1-206ENST00000560447 TRIM49P0CI25 452 aa10.5□□□□□ -0.73
RTF1-206ENST00000560447 TRIM49CP0CI26 452 aa10.5□□□□□ -0.73
RTF1-206ENST00000560447 ZBTB48P10074 688 aaPredicted RBP10.5□□□□□ -0.73
RTF1-206ENST00000560447 GPC3P51654 580 aa10.5□□□□□ -0.73
RTF1-206ENST00000560447 PEX3P56589 373 aa10.5□□□□□ -0.73
RTF1-206ENST00000560447 PPATQ06203 517 aa10.5□□□□□ -0.73
RTF1-206ENST00000560447 CUL1Q13616 776 aa10.5□□□□□ -0.73
RTF1-206ENST00000560447 PWP2Q15269 919 aaKnown RBP10.5□□□□□ -0.73
RTF1-206ENST00000560447 UGCGQ16739 394 aa10.5□□□□□ -0.73
RTF1-206ENST00000560447 FAM102BQ5T8I3 360 aa10.5□□□□□ -0.73
RTF1-206ENST00000560447 C11orf63Q6NUN7 778 aa10.5□□□□□ -0.73
RTF1-206ENST00000560447 PPP1R2P3Q6NXS1 205 aa10.5□□□□□ -0.73
RTF1-206ENST00000560447 ABHD15Q6UXT9 468 aa10.5□□□□□ -0.73
RTF1-206ENST00000560447 ANO5Q75V66 913 aa10.5□□□□□ -0.73
RTF1-206ENST00000560447 PEX26Q7Z412 305 aa10.5□□□□□ -0.73
RTF1-206ENST00000560447 C1orf131Q8NDD1 294 aaKnown RBP10.5□□□□□ -0.73
RTF1-206ENST00000560447 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.5□□□□□ -0.73
RTF1-206ENST00000560447 OLIG1Q8TAK6 271 aa10.5□□□□□ -0.73
RTF1-206ENST00000560447 U2AF1L4Q8WU68 220 aaKnown RBP10.5□□□□□ -0.73
RTF1-206ENST00000560447 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.5□□□□□ -0.733e-11■■□□□ 11.6
RTF1-206ENST00000560447 LRRC1Q9BTT6 524 aa10.5□□□□□ -0.73
RTF1-206ENST00000560447 PACSIN1Q9BY11 444 aa10.5□□□□□ -0.73
RTF1-206ENST00000560447 ISCUQ9H1K1 167 aa10.5□□□□□ -0.73
RTF1-206ENST00000560447 CARD9Q9H257 536 aa10.5□□□□□ -0.73
RTF1-206ENST00000560447 BCAS3Q9H6U6 928 aa10.5□□□□□ -0.73
RTF1-206ENST00000560447 ATP6V0A4Q9HBG4 840 aa10.5□□□□□ -0.73
RTF1-206ENST00000560447 KMT5AQ9NQR1 393 aa10.5□□□□□ -0.73
RTF1-206ENST00000560447 PRDM10Q9NQV6 1147 aa10.5□□□□□ -0.73
RTF1-206ENST00000560447 HOMER2Q9NSB8 354 aa10.5□□□□□ -0.73
RTF1-206ENST00000560447 RBM12Q9NTZ6 932 aaKnown RBP10.5□□□□□ -0.73
RTF1-206ENST00000560447 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.5□□□□□ -0.73
RTF1-206ENST00000560447 AFG3L2Q9Y4W6 797 aa10.5□□□□□ -0.73
RTF1-206ENST00000560447 OTOFQ9HC10 1997 aa10.5□□□□□ -0.73
RTF1-206ENST00000560447 DOCK5Q9H7D0 1870 aa10.49□□□□□ -0.73
RTF1-206ENST00000560447 SPDYE16A6NNV3 312 aaPredicted RBP10.49□□□□□ -0.73
RTF1-206ENST00000560447 GOLGA8KD6RF30 607 aa10.49□□□□□ -0.73
RTF1-206ENST00000560447 H3BQF6 201 aa10.49□□□□□ -0.73
RTF1-206ENST00000560447 RTN2O75298 545 aa10.49□□□□□ -0.73
RTF1-206ENST00000560447 FTCDO95954 541 aa10.49□□□□□ -0.73
RTF1-206ENST00000560447 SUPT20HL2P0C7V6 817 aa10.49□□□□□ -0.73
RTF1-206ENST00000560447 CNGA1P29973 690 aa10.49□□□□□ -0.73
RTF1-206ENST00000560447 RFC5P40937 340 aa10.49□□□□□ -0.73
RTF1-206ENST00000560447 TNNT3P45378 269 aaPredicted RBP10.49□□□□□ -0.73
RTF1-206ENST00000560447 NPTX2P47972 431 aa10.49□□□□□ -0.73
RTF1-206ENST00000560447 HMGCS2P54868 508 aa10.49□□□□□ -0.73
RTF1-206ENST00000560447 TMEM132BQ14DG7 1078 aa10.49□□□□□ -0.73
RTF1-206ENST00000560447 STXBP2Q15833 593 aa10.49□□□□□ -0.73
RTF1-206ENST00000560447 SNRNP35Q16560 246 aaKnown RBP10.49□□□□□ -0.73
RTF1-206ENST00000560447 C1orf220Q5T0J3 134 aa10.49□□□□□ -0.73
RTF1-206ENST00000560447 ANGEL2Q5VTE6 544 aaKnown RBP10.49□□□□□ -0.73
RTF1-206ENST00000560447 PHLDB3Q6NSJ2 640 aa10.49□□□□□ -0.73
RTF1-206ENST00000560447 LBX2Q6XYB7 198 aa10.49□□□□□ -0.73
RTF1-206ENST00000560447 NT5DC3Q86UY8 548 aa10.49□□□□□ -0.73
RTF1-206ENST00000560447 EXOC8Q8IYI6 725 aa10.49□□□□□ -0.73
RTF1-206ENST00000560447 FAM71AQ8IYT1 594 aa10.49□□□□□ -0.73
RTF1-206ENST00000560447 PARD3BQ8TEW8 1205 aa10.49□□□□□ -0.73
RTF1-206ENST00000560447 SHC3Q92529 594 aa10.49□□□□□ -0.73
RTF1-206ENST00000560447 CEP170P1Q96L14 293 aa10.49□□□□□ -0.73
RTF1-206ENST00000560447 RPS6KC1Q96S38 1066 aa10.49□□□□□ -0.73
RTF1-206ENST00000560447 MPHOSPH6Q99547 160 aaKnown RBP10.49□□□□□ -0.73
RTF1-206ENST00000560447 CBWD1Q9BRT8 395 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms