RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 NUBP1P53384 320 aa15.08■□□□□ 0
SMAD3-214ENST00000560402 CYP4A11Q02928 519 aa15.08■□□□□ 0
SMAD3-214ENST00000560402 NR5A1Q13285 461 aa15.08■□□□□ 0
SMAD3-214ENST00000560402 CALCRLQ16602 461 aa15.08■□□□□ 0
SMAD3-214ENST00000560402 LONRF3Q496Y0 759 aa15.08■□□□□ 0
SMAD3-214ENST00000560402 UBXN11Q5T124 520 aa15.08■□□□□ 0
SMAD3-214ENST00000560402 RARS2Q5T160 578 aaKnown RBP15.08■□□□□ 0
SMAD3-214ENST00000560402 HACE1Q8IYU2 909 aa15.08■□□□□ 0
SMAD3-214ENST00000560402 PLCD3Q8N3E9 789 aa15.08■□□□□ 0
SMAD3-214ENST00000560402 SLC22A17Q8WUG5 538 aa15.08■□□□□ 0
SMAD3-214ENST00000560402 CCDC43Q96MW1 224 aaKnown RBP15.08■□□□□ 0
SMAD3-214ENST00000560402 EIF2AK1Q9BQI3 630 aaKnown RBP15.08■□□□□ 0
SMAD3-214ENST00000560402 NFKBIZQ9BYH8 718 aa15.08■□□□□ 0
SMAD3-214ENST00000560402 IRF2BPLQ9H1B7 796 aa15.08■□□□□ 0
SMAD3-214ENST00000560402 BMP2KQ9NSY1 1161 aaPredicted RBP15.08■□□□□ 0
SMAD3-214ENST00000560402 GJB4Q9NTQ9 266 aa15.08■□□□□ 0
SMAD3-214ENST00000560402 PCDHA12Q9UN75 941 aa15.08■□□□□ 0
SMAD3-214ENST00000560402 SSX2IPQ9Y2D8 614 aa15.08■□□□□ 0
SMAD3-214ENST00000560402 C2CD4DB7Z1M9 353 aa15.07■□□□□ 0
SMAD3-214ENST00000560402 NEMFO60524 1076 aa15.07■□□□□ 0
SMAD3-214ENST00000560402 TSPAN1O60635 241 aa15.07■□□□□ 0
SMAD3-214ENST00000560402 SLITRK3O94933 977 aa15.07■□□□□ 0
SMAD3-214ENST00000560402 ITGA4P13612 1032 aa15.07■□□□□ 0
SMAD3-214ENST00000560402 EPCAMP16422 314 aa15.07■□□□□ 0
SMAD3-214ENST00000560402 PTENP60484 403 aa15.07■□□□□ 0
SMAD3-214ENST00000560402 TRIM29Q14134 588 aa15.07■□□□□ 0
SMAD3-214ENST00000560402 CTTNQ14247 550 aaKnown RBP15.07■□□□□ 0
SMAD3-214ENST00000560402 EARS2Q5JPH6 523 aaKnown RBP15.07■□□□□ 0
SMAD3-214ENST00000560402 ATAT1Q5SQI0 421 aa15.07■□□□□ 0
SMAD3-214ENST00000560402 ELMSAN1Q6PJG2 1045 aa15.07■□□□□ 0
SMAD3-214ENST00000560402 CLEC17AQ6ZS10 378 aa15.07■□□□□ 0
SMAD3-214ENST00000560402 CABP7Q86V35 215 aa15.07■□□□□ 0
SMAD3-214ENST00000560402 ZNF280BQ86YH2 543 aa15.07■□□□□ 0
SMAD3-214ENST00000560402 TPH2Q8IWU9 490 aa15.07■□□□□ 0
SMAD3-214ENST00000560402 ZDHHC14Q8IZN3 488 aa15.07■□□□□ 0
SMAD3-214ENST00000560402 PRSS33Q8NF86 280 aa15.07■□□□□ 0
SMAD3-214ENST00000560402 AUTS2Q8WXX7 1259 aa15.07■□□□□ 0
SMAD3-214ENST00000560402 HERC2P3Q9BVR0 1158 aa15.07■□□□□ 0
SMAD3-214ENST00000560402 VN1R3Q9BXE9 311 aa15.07■□□□□ 0
SMAD3-214ENST00000560402 XPNPEP1Q9NQW7 623 aa15.07■□□□□ 0
SMAD3-214ENST00000560402 DBR1Q9UK59 544 aaKnown RBP15.07■□□□□ 0
SMAD3-214ENST00000560402 FAN1Q9Y2M0 1017 aa15.07■□□□□ 0
SMAD3-214ENST00000560402 PLXNA3P51805 1871 aa15.07■□□□□ 0
SMAD3-214ENST00000560402 MYO10Q9HD67 2058 aa15.07■□□□□ 0
SMAD3-214ENST00000560402 FAM205CA6NFA0 338 aa15.06■□□□□ 0
SMAD3-214ENST00000560402 B4GALT3O60512 393 aa15.06■□□□□ 0
SMAD3-214ENST00000560402 DDHD2O94830 711 aa15.06■□□□□ 0
SMAD3-214ENST00000560402 SOD2P04179 222 aa15.06■□□□□ 0
SMAD3-214ENST00000560402 ALDH2P05091 517 aa15.06■□□□□ 0
SMAD3-214ENST00000560402 URODP06132 367 aa15.06■□□□□ 0
SMAD3-214ENST00000560402 FDPSP14324 419 aaKnown RBP15.06■□□□□ 0
SMAD3-214ENST00000560402 PDCP20941 246 aa15.06■□□□□ 0
SMAD3-214ENST00000560402 SP100P23497 879 aaPredicted RBP15.06■□□□□ 0
SMAD3-214ENST00000560402 CAPSQ13938 189 aa15.06■□□□□ 0
SMAD3-214ENST00000560402 C15orf39Q6ZRI6 1047 aa15.06■□□□□ 0
SMAD3-214ENST00000560402 DIS3L2Q8IYB7 885 aaKnown RBP15.06■□□□□ 0
SMAD3-214ENST00000560402 KREMEN2Q8NCW0 462 aa15.06■□□□□ 0
SMAD3-214ENST00000560402 SMG8Q8ND04 991 aaKnown RBP15.06■□□□□ 0
SMAD3-214ENST00000560402 NSUN7Q8NE18 718 aaKnown RBP15.06■□□□□ 0
SMAD3-214ENST00000560402 HSD17B14Q9BPX1 270 aa15.06■□□□□ 0
SMAD3-214ENST00000560402 CSRNP2Q9H175 543 aa15.06■□□□□ 0
SMAD3-214ENST00000560402 TTC12Q9H892 705 aaPredicted RBP15.06■□□□□ 0
SMAD3-214ENST00000560402 MRPL17Q9NRX2 175 aaKnown RBP15.06■□□□□ 0
SMAD3-214ENST00000560402 DPP7Q9UHL4 492 aa15.06■□□□□ 0
SMAD3-214ENST00000560402 KIF3AQ9Y496 699 aa15.06■□□□□ 0
SMAD3-214ENST00000560402 IPPQ9Y573 584 aa15.06■□□□□ 0
SMAD3-214ENST00000560402 ATP6V1DQ9Y5K8 247 aa15.06■□□□□ 0
SMAD3-214ENST00000560402 MTCL1Q9Y4B5 1905 aaKnown RBP15.05■□□□□ 0
SMAD3-214ENST00000560402 SPDYE4A6NLX3 237 aa15.05■□□□□ -0
SMAD3-214ENST00000560402 INO80B-WBP1J3KQ70 363 aa15.05■□□□□ -0
SMAD3-214ENST00000560402 NRP1O14786 923 aa15.05■□□□□ -0
SMAD3-214ENST00000560402 NR1I2O75469 434 aa15.05■□□□□ -0
SMAD3-214ENST00000560402 RARRES1P49788 294 aa15.05■□□□□ -0
SMAD3-214ENST00000560402 CLCN4P51793 760 aa15.05■□□□□ -0
SMAD3-214ENST00000560402 MBTD1Q05BQ5 628 aa15.05■□□□□ -0
SMAD3-214ENST00000560402 ME3Q16798 604 aa15.05■□□□□ -0
SMAD3-214ENST00000560402 CCDC149Q6ZUS6 474 aa15.05■□□□□ -0
SMAD3-214ENST00000560402 KLHL5Q96PQ7 755 aa15.05■□□□□ -0
SMAD3-214ENST00000560402 TRIM6Q9C030 488 aaPredicted RBP15.05■□□□□ -0
SMAD3-214ENST00000560402 CDH22Q9UJ99 828 aa15.05■□□□□ -0
SMAD3-214ENST00000560402 GIT1Q9Y2X7 761 aa15.05■□□□□ -0
SMAD3-214ENST00000560402 LILRB3O75022 631 aa15.04■□□□□ -0
SMAD3-214ENST00000560402 LARGE1O95461 756 aa15.04■□□□□ -0
SMAD3-214ENST00000560402 POMCP01189 267 aa15.04■□□□□ -0
SMAD3-214ENST00000560402 ADH1AP07327 375 aa15.04■□□□□ -0
SMAD3-214ENST00000560402 XRCC6P12956 609 aaKnown RBP eCLIP15.04■□□□□ -0
SMAD3-214ENST00000560402 KLRC2P26717 231 aa15.04■□□□□ -0
SMAD3-214ENST00000560402 ARL2P36404 184 aa15.04■□□□□ -0
SMAD3-214ENST00000560402 MLH1P40692 756 aa15.04■□□□□ -0
SMAD3-214ENST00000560402 DSC1Q08554 894 aa15.04■□□□□ -0
SMAD3-214ENST00000560402 ORC2Q13416 577 aaPredicted RBP15.04■□□□□ -0
SMAD3-214ENST00000560402 AMHR2Q16671 573 aa15.04■□□□□ -0
SMAD3-214ENST00000560402 CYP26C1Q6V0L0 522 aa15.04■□□□□ -0
SMAD3-214ENST00000560402 GPR149Q86SP6 731 aa15.04■□□□□ -0
SMAD3-214ENST00000560402 COLGALT2Q8IYK4 626 aa15.04■□□□□ -0
SMAD3-214ENST00000560402 GPR65Q8IYL9 337 aa15.04■□□□□ -0
SMAD3-214ENST00000560402 RNF168Q8IYW5 571 aaPredicted RBP15.04■□□□□ -0
SMAD3-214ENST00000560402 NECAB1Q8N987 351 aa15.04■□□□□ -0
SMAD3-214ENST00000560402 CMASQ8NFW8 434 aaPredicted RBP15.04■□□□□ -0
SMAD3-214ENST00000560402 ACSF2Q96CM8 615 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms