RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 ADRB2P07550 413 aa8.74□□□□□ -1.01
SMAD3-212ENST00000559937 ACTN2P35609 894 aa8.74□□□□□ -1.01
SMAD3-212ENST00000559937 NPTX2P47972 431 aa8.74□□□□□ -1.01
SMAD3-212ENST00000559937 DLG4P78352 724 aa8.74□□□□□ -1.01
SMAD3-212ENST00000559937 SLC7A5Q01650 507 aa8.74□□□□□ -1.01
SMAD3-212ENST00000559937 PLS1Q14651 629 aa8.74□□□□□ -1.01
SMAD3-212ENST00000559937 SNRNP35Q16560 246 aaKnown RBP8.74□□□□□ -1.01
SMAD3-212ENST00000559937 ARHGAP44Q17R89 818 aa8.74□□□□□ -1.01
SMAD3-212ENST00000559937 BRDTQ58F21 947 aaPredicted RBP8.74□□□□□ -1.01
SMAD3-212ENST00000559937 XKR3Q5GH77 459 aa8.74□□□□□ -1.01
SMAD3-212ENST00000559937 MIS18BP1Q6P0N0 1132 aa8.74□□□□□ -1.01
SMAD3-212ENST00000559937 ABHD15Q6UXT9 468 aa8.74□□□□□ -1.01
SMAD3-212ENST00000559937 ENOSF1Q7L5Y1 443 aa8.74□□□□□ -1.01
SMAD3-212ENST00000559937 ARHGEF19Q8IW93 802 aa8.74□□□□□ -1.01
SMAD3-212ENST00000559937 CD302Q8IX05 232 aa8.74□□□□□ -1.01
SMAD3-212ENST00000559937 GSPT2Q8IYD1 628 aaKnown RBP8.74□□□□□ -1.01
SMAD3-212ENST00000559937 CCDC26Q8TAB7 109 aa8.74□□□□□ -1.01
SMAD3-212ENST00000559937 SLC35G2Q8TBE7 412 aa8.74□□□□□ -1.01
SMAD3-212ENST00000559937 PLEKHO2Q8TD55 490 aa8.74□□□□□ -1.01
SMAD3-212ENST00000559937 PARD3BQ8TEW8 1205 aa8.74□□□□□ -1.01
SMAD3-212ENST00000559937 CASKIN2Q8WXE0 1202 aa8.74□□□□□ -1.01
SMAD3-212ENST00000559937 DHX38Q92620 1227 aaKnown RBP8.74□□□□□ -1.01
SMAD3-212ENST00000559937 KLRG1Q96E93 195 aa8.74□□□□□ -1.01
SMAD3-212ENST00000559937 CEP170P1Q96L14 293 aa8.74□□□□□ -1.01
SMAD3-212ENST00000559937 IFT74Q96LB3 600 aa8.74□□□□□ -1.01
SMAD3-212ENST00000559937 RPS6KC1Q96S38 1066 aa8.74□□□□□ -1.01
SMAD3-212ENST00000559937 RUFY1Q96T51 708 aa8.74□□□□□ -1.01
SMAD3-212ENST00000559937 KRT12Q99456 494 aa8.74□□□□□ -1.01
SMAD3-212ENST00000559937 TMEM117Q9H0C3 514 aa8.74□□□□□ -1.01
SMAD3-212ENST00000559937 TAF1DQ9H5J8 278 aaPredicted RBP8.74□□□□□ -1.01
SMAD3-212ENST00000559937 ATP6V0A4Q9HBG4 840 aa8.74□□□□□ -1.01
SMAD3-212ENST00000559937 GPBP1L1Q9HC44 474 aaPredicted RBP8.74□□□□□ -1.01
SMAD3-212ENST00000559937 EPB41L5Q9HCM4 733 aa8.74□□□□□ -1.01
SMAD3-212ENST00000559937 JPH1Q9HDC5 661 aaPredicted RBP8.74□□□□□ -1.01
SMAD3-212ENST00000559937 UBE2TQ9NPD8 197 aaPredicted RBP8.74□□□□□ -1.01
SMAD3-212ENST00000559937 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.74□□□□□ -1.01
SMAD3-212ENST00000559937 CYP39A1Q9NYL5 469 aa8.74□□□□□ -1.01
SMAD3-212ENST00000559937 GABBR1Q9UBS5 961 aa8.74□□□□□ -1.01
SMAD3-212ENST00000559937 FBXO40Q9UH90 709 aa8.74□□□□□ -1.01
SMAD3-212ENST00000559937 PACSIN2Q9UNF0 486 aaPredicted RBP8.74□□□□□ -1.01
SMAD3-212ENST00000559937 NOC2LQ9Y3T9 749 aaKnown RBP8.74□□□□□ -1.01
SMAD3-212ENST00000559937 PPME1Q9Y570 386 aa8.74□□□□□ -1.01
SMAD3-212ENST00000559937 RIPK3Q9Y572 518 aa8.74□□□□□ -1.01
SMAD3-212ENST00000559937 GJA3Q9Y6H8 435 aa8.74□□□□□ -1.01
SMAD3-212ENST00000559937 ZSWIM8A7E2V4 1837 aa8.74□□□□□ -1.01
SMAD3-212ENST00000559937 DENND3A2RUS2 1198 aa8.73□□□□□ -1.01
SMAD3-212ENST00000559937 CCDC169A6NNP5 214 aa8.73□□□□□ -1.01
SMAD3-212ENST00000559937 DDX3YO15523 660 aaKnown RBP8.73□□□□□ -1.01
SMAD3-212ENST00000559937 RAD51CO43502 376 aa8.73□□□□□ -1.01
SMAD3-212ENST00000559937 BUB1BO60566 1050 aaPredicted RBP8.73□□□□□ -1.01
SMAD3-212ENST00000559937 ATG7O95352 703 aa8.73□□□□□ -1.01
SMAD3-212ENST00000559937 GGPS1O95749 300 aa8.73□□□□□ -1.01
SMAD3-212ENST00000559937 PIGRP01833 764 aa8.73□□□□□ -1.01
SMAD3-212ENST00000559937 IVLP07476 585 aa8.73□□□□□ -1.01
SMAD3-212ENST00000559937 GLI1P08151 1106 aa8.73□□□□□ -1.01
SMAD3-212ENST00000559937 SUPT20HL2P0C7V6 817 aa8.73□□□□□ -1.01
SMAD3-212ENST00000559937 CNGA1P29973 690 aa8.73□□□□□ -1.01
SMAD3-212ENST00000559937 GGCXP38435 758 aa8.73□□□□□ -1.01
SMAD3-212ENST00000559937 HSPA9P38646 679 aaKnown RBP8.73□□□□□ -1.01
SMAD3-212ENST00000559937 GCLMP48507 274 aa8.73□□□□□ -1.01
SMAD3-212ENST00000559937 LMAN1P49257 510 aa8.73□□□□□ -1.01
SMAD3-212ENST00000559937 HMGCS2P54868 508 aa8.73□□□□□ -1.01
SMAD3-212ENST00000559937 GPC5P78333 572 aa8.73□□□□□ -1.01
SMAD3-212ENST00000559937 PRKCEQ02156 737 aa8.73□□□□□ -1.01
SMAD3-212ENST00000559937 GUCY2DQ02846 1103 aa8.73□□□□□ -1.01
SMAD3-212ENST00000559937 CYP24A1Q07973 514 aa8.73□□□□□ -1.01
SMAD3-212ENST00000559937 DGKZQ13574 1117 aa8.73□□□□□ -1.01
SMAD3-212ENST00000559937 TMEM132BQ14DG7 1078 aa8.73□□□□□ -1.01
SMAD3-212ENST00000559937 SUPT20HL1Q3ZLR7 823 aa8.73□□□□□ -1.01
SMAD3-212ENST00000559937 SPDYCQ5MJ68 293 aa8.73□□□□□ -1.01
SMAD3-212ENST00000559937 ANGEL2Q5VTE6 544 aaKnown RBP8.73□□□□□ -1.01
SMAD3-212ENST00000559937 PLA2G4FQ68DD2 849 aa8.73□□□□□ -1.01
SMAD3-212ENST00000559937 LRIG3Q6UXM1 1119 aa8.73□□□□□ -1.01
SMAD3-212ENST00000559937 LEKR1Q6ZMV7 388 aa8.73□□□□□ -1.01
SMAD3-212ENST00000559937 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.73□□□□□ -1.01
SMAD3-212ENST00000559937 MAEAQ7L5Y9 396 aa8.73□□□□□ -1.01
SMAD3-212ENST00000559937 MAATS1Q7Z4T9 603 aa8.73□□□□□ -1.01
SMAD3-212ENST00000559937 EFCAB13Q8IY85 973 aa8.73□□□□□ -1.01
SMAD3-212ENST00000559937 GPD1LQ8N335 351 aa8.73□□□□□ -1.01
SMAD3-212ENST00000559937 RDH13Q8NBN7 331 aa8.73□□□□□ -1.01
SMAD3-212ENST00000559937 FBXL13Q8NEE6 735 aa8.73□□□□□ -1.01
SMAD3-212ENST00000559937 FAM76AQ8TAV0 307 aa8.73□□□□□ -1.01
SMAD3-212ENST00000559937 SEC14L1Q92503 715 aa8.73□□□□□ -1.01
SMAD3-212ENST00000559937 LRRC45Q96CN5 670 aa8.73□□□□□ -1.01
SMAD3-212ENST00000559937 WNK4Q96J92 1243 aa8.73□□□□□ -1.01
SMAD3-212ENST00000559937 NT5C1BQ96P26 610 aa8.73□□□□□ -1.01
SMAD3-212ENST00000559937 FAM204AQ9H8W3 233 aa8.73□□□□□ -1.01
SMAD3-212ENST00000559937 GPRC5CQ9NQ84 441 aa8.73□□□□□ -1.01
SMAD3-212ENST00000559937 A1CFQ9NQ94 594 aaKnown RBP8.73□□□□□ -1.01
SMAD3-212ENST00000559937 CYP26B1Q9NR63 512 aa8.73□□□□□ -1.01
SMAD3-212ENST00000559937 FAM114A2Q9NRY5 505 aa8.73□□□□□ -1.01
SMAD3-212ENST00000559937 GPRC5DQ9NZD1 345 aa8.73□□□□□ -1.01
SMAD3-212ENST00000559937 CWC15Q9P013 229 aaKnown RBP8.73□□□□□ -1.01
SMAD3-212ENST00000559937 ARHGAP28Q9P2N2 729 aa8.73□□□□□ -1.01
SMAD3-212ENST00000559937 NOCTQ9UK39 431 aaKnown RBP8.73□□□□□ -1.01
SMAD3-212ENST00000559937 ZHX1Q9UKY1 873 aaPredicted RBP8.73□□□□□ -1.01
SMAD3-212ENST00000559937 SYNGAP1Q96PV0 1343 aa8.73□□□□□ -1.01
SMAD3-212ENST00000559937 ZNF541Q9H0D2 1346 aa8.73□□□□□ -1.01
SMAD3-212ENST00000559937 FAM187AA6NFU0 413 aa8.72□□□□□ -1.01
SMAD3-212ENST00000559937 SPDYE16A6NNV3 312 aaPredicted RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms