RNA–Protein interactions for RNA: ENST00000559858.5

ZEB1-217, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 2,745 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-217ENST00000559858 GPKOWQ92917 476 aaPredicted RBP eCLIP7.11□□□□□ -1.27
ZEB1-217ENST00000559858 ZNF653Q96CK0 615 aa7.11□□□□□ -1.27
ZEB1-217ENST00000559858 FAM89AQ96GI7 184 aa7.11□□□□□ -1.27
ZEB1-217ENST00000559858 CATSPER2Q96P56 530 aa7.11□□□□□ -1.27
ZEB1-217ENST00000559858 TUBGCP5Q96RT8 1024 aa7.11□□□□□ -1.27
ZEB1-217ENST00000559858 SLX1AQ9BQ83 275 aa7.11□□□□□ -1.27
ZEB1-217ENST00000559858 KRT82Q9NSB4 513 aa7.11□□□□□ -1.27
ZEB1-217ENST00000559858 ETNK2Q9NVF9 386 aa7.11□□□□□ -1.27
ZEB1-217ENST00000559858 STK32BQ9NY57 414 aa7.11□□□□□ -1.27
ZEB1-217ENST00000559858 HSFX1Q9UBD0 423 aa7.11□□□□□ -1.27
ZEB1-217ENST00000559858 CHMP2BQ9UQN3 213 aa7.11□□□□□ -1.27
ZEB1-217ENST00000559858 NUP188Q5SRE5 1749 aa7.11□□□□□ -1.27
ZEB1-217ENST00000559858 SYNGAP1Q96PV0 1343 aa7.11□□□□□ -1.27
ZEB1-217ENST00000559858 MYH3P11055 1940 aa7.11□□□□□ -1.27
ZEB1-217ENST00000559858 FAM47DPA6NHR8 397 aa7.11□□□□□ -1.27
ZEB1-217ENST00000559858 GSC2O15499 205 aa7.11□□□□□ -1.27
ZEB1-217ENST00000559858 ATP9BO43861 1147 aa7.11□□□□□ -1.27
ZEB1-217ENST00000559858 RAD21O60216 631 aa7.11□□□□□ -1.27
ZEB1-217ENST00000559858 TTC4O95801 387 aa7.11□□□□□ -1.27
ZEB1-217ENST00000559858 FGRP09769 529 aa7.11□□□□□ -1.27
ZEB1-217ENST00000559858 TMEM253P0C7T8 217 aa7.11□□□□□ -1.27
ZEB1-217ENST00000559858 ACTN1P12814 892 aa7.11□□□□□ -1.27
ZEB1-217ENST00000559858 DNAJC3Q13217 504 aa7.11□□□□□ -1.27
ZEB1-217ENST00000559858 MPP3Q13368 585 aa7.11□□□□□ -1.27
ZEB1-217ENST00000559858 CERKLQ49MI3 558 aaPredicted RBP7.11□□□□□ -1.27
ZEB1-217ENST00000559858 KLC3Q6P597 504 aa7.11□□□□□ -1.27
ZEB1-217ENST00000559858 SPATA24Q86W54 205 aa7.11□□□□□ -1.27
ZEB1-217ENST00000559858 CCDC125Q86Z20 511 aa7.11□□□□□ -1.27
ZEB1-217ENST00000559858 SRRM1Q8IYB3 904 aaKnown RBP7.11□□□□□ -1.27
ZEB1-217ENST00000559858 ZBTB38Q8NAP3 1195 aaPredicted RBP7.11□□□□□ -1.27
ZEB1-217ENST00000559858 ZBTB8BQ8NAP8 495 aaPredicted RBP7.11□□□□□ -1.27
ZEB1-217ENST00000559858 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.11□□□□□ -1.27
ZEB1-217ENST00000559858 DTX3LQ8TDB6 740 aa7.11□□□□□ -1.27
ZEB1-217ENST00000559858 DDX12PQ92771 950 aa7.11□□□□□ -1.27
ZEB1-217ENST00000559858 MIPEPQ99797 713 aa7.11□□□□□ -1.27
ZEB1-217ENST00000559858 CCDC77Q9BR77 488 aa7.11□□□□□ -1.27
ZEB1-217ENST00000559858 PICK1Q9NRD5 415 aa7.11□□□□□ -1.27
ZEB1-217ENST00000559858 UBR1Q8IWV7 1749 aa7.11□□□□□ -1.27
ZEB1-217ENST00000559858 ATAD5Q96QE3 1844 aa7.11□□□□□ -1.27
ZEB1-217ENST00000559858 SMIM31A0A1B0GVY4 71 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 TMEM221A6NGB7 291 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 A8MXQ7 604 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 FOXO6A8MYZ6 492 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 MIF4GDA9UHW6 222 aaKnown RBP7.1□□□□□ -1.27
ZEB1-217ENST00000559858 C2CD2LO14523 706 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 CCNT1O60563 726 aaKnown RBP7.1□□□□□ -1.27
ZEB1-217ENST00000559858 EDF1O60869 148 aaKnown RBP7.1□□□□□ -1.27
ZEB1-217ENST00000559858 CDH16O75309 829 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 SPATA31D3P0C874 917 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 SLC5A1P13866 664 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 ETS2P15036 469 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 SLC9A1P19634 815 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 CYP7A1P22680 504 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 COILP38432 576 aaPredicted RBP7.1□□□□□ -1.27
ZEB1-217ENST00000559858 WDR4P57081 412 aaKnown RBP7.1□□□□□ -1.27
ZEB1-217ENST00000559858 SULT2A1Q06520 285 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 CBX3Q13185 183 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 ITGA9Q13797 1035 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 R3HDM1Q15032 1099 aaKnown RBP7.1□□□□□ -1.27
ZEB1-217ENST00000559858 DPY19L2P1Q6NXN4 242 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 TTC27Q6P3X3 843 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 SPATA31D4Q6ZUB0 917 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 KRT25Q7Z3Z0 450 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 KBTBD2Q8IY47 623 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 CCDC105Q8IYK2 499 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 VPS52Q8N1B4 723 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 UBL4BQ8N7F7 174 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 GLIS3Q8NEA6 775 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 ZNF398Q8TD17 642 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 SDR42E1Q8WUS8 393 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 WDR60Q8WVS4 1066 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 RAD54LQ92698 747 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 PPP2R3CQ969Q6 453 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 MCUR1Q96AQ8 359 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 HAUS1Q96CS2 278 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 KANSL2Q9H9L4 492 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 OSGEPQ9NPF4 335 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 WHRNQ9P202 907 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 PAIP2BQ9ULR5 123 aaKnown RBP7.1□□□□□ -1.27
ZEB1-217ENST00000559858 NAALADL1Q9UQQ1 740 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 CAMTA1Q9Y6Y1 1673 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 COL22A1Q8NFW1 1626 aaPredicted RBP7.1□□□□□ -1.27
ZEB1-217ENST00000559858 MAGEB6P1A0A0J9YX57 407 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 A0A1W2PRG0 241 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 BTBD19C9JJ37 291 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 GYG2O15488 501 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 EXOC3O60645 756 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 ASMTLO95671 621 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 LMNB1P20700 586 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 FGFR2P21802 821 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 MUTP22033 750 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 HPCAP84074 193 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 DSG1Q02413 1049 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 TMEM62Q0P6H9 643 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 SPARCL1Q14515 664 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 EXOC3L4Q17RC7 722 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 LETM2Q2VYF4 491 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.1□□□□□ -1.27
ZEB1-217ENST00000559858 FAM26FQ5R3K3 315 aa7.1□□□□□ -1.27
ZEB1-217ENST00000559858 NLRP9Q7RTR0 991 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms