RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 TMEM105Q8N8V8 129 aa14.61□□□□□ -0.07
TPM1-220ENST00000559556 RNF149Q8NC42 400 aa14.61□□□□□ -0.07
TPM1-220ENST00000559556 SMG8Q8ND04 991 aaKnown RBP14.61□□□□□ -0.07
TPM1-220ENST00000559556 CNNM3Q8NE01 707 aa14.61□□□□□ -0.07
TPM1-220ENST00000559556 KLHL5Q96PQ7 755 aa14.61□□□□□ -0.07
TPM1-220ENST00000559556 FAM193BQ96PV7 902 aaPredicted RBP14.61□□□□□ -0.07
TPM1-220ENST00000559556 MTRQ99707 1265 aa14.61□□□□□ -0.07
TPM1-220ENST00000559556 ZSWIM4Q9H7M6 989 aa14.61□□□□□ -0.07
TPM1-220ENST00000559556 UBN1Q9NPG3 1134 aa14.61□□□□□ -0.07
TPM1-220ENST00000559556 BMP2KQ9NSY1 1161 aaPredicted RBP14.61□□□□□ -0.07
TPM1-220ENST00000559556 GJB4Q9NTQ9 266 aa14.61□□□□□ -0.07
TPM1-220ENST00000559556 MARCH5Q9NX47 278 aa14.61□□□□□ -0.07
TPM1-220ENST00000559556 RGL1Q9NZL6 768 aa14.61□□□□□ -0.07
TPM1-220ENST00000559556 LIMD1Q9UGP4 676 aa14.61□□□□□ -0.07
TPM1-220ENST00000559556 FAN1Q9Y2M0 1017 aa14.61□□□□□ -0.07
TPM1-220ENST00000559556 F5P12259 2224 aa14.61□□□□□ -0.07
TPM1-220ENST00000559556 DNAH14Q0VDD8 3507 aa14.61□□□□□ -0.07
TPM1-220ENST00000559556 PROB1E7EW31 1015 aa14.6□□□□□ -0.07
TPM1-220ENST00000559556 GFRA3O60609 400 aa14.6□□□□□ -0.07
TPM1-220ENST00000559556 TSPAN1O60635 241 aa14.6□□□□□ -0.07
TPM1-220ENST00000559556 PFKFB2O60825 505 aa14.6□□□□□ -0.07
TPM1-220ENST00000559556 ERLIN2O94905 339 aa14.6□□□□□ -0.07
TPM1-220ENST00000559556 EFEMP2O95967 443 aa14.6□□□□□ -0.07
TPM1-220ENST00000559556 POMCP01189 267 aa14.6□□□□□ -0.07
TPM1-220ENST00000559556 ALDH2P05091 517 aa14.6□□□□□ -0.07
TPM1-220ENST00000559556 SSBP05455 408 aaKnown RBP eCLIP14.6□□□□□ -0.07
TPM1-220ENST00000559556 KLRC2P26717 231 aa14.6□□□□□ -0.07
TPM1-220ENST00000559556 AXLP30530 894 aa14.6□□□□□ -0.07
TPM1-220ENST00000559556 PTENP60484 403 aa14.6□□□□□ -0.07
TPM1-220ENST00000559556 DSC1Q08554 894 aa14.6□□□□□ -0.07
TPM1-220ENST00000559556 MXD4Q14582 209 aaPredicted RBP14.6□□□□□ -0.07
TPM1-220ENST00000559556 XKR9Q5GH70 373 aa14.6□□□□□ -0.07
TPM1-220ENST00000559556 NCAPH2Q6IBW4 605 aa14.6□□□□□ -0.07
TPM1-220ENST00000559556 NOTUMQ6P988 496 aa14.6□□□□□ -0.07
TPM1-220ENST00000559556 IFNLR1Q8IU57 520 aaPredicted RBP14.6□□□□□ -0.07
TPM1-220ENST00000559556 RNF168Q8IYW5 571 aaPredicted RBP14.6□□□□□ -0.07
TPM1-220ENST00000559556 ATOH1Q92858 354 aaPredicted RBP14.6□□□□□ -0.07
TPM1-220ENST00000559556 ACSF2Q96CM8 615 aaPredicted RBP14.6□□□□□ -0.07
TPM1-220ENST00000559556 CCDC51Q96ER9 411 aa14.6□□□□□ -0.07
TPM1-220ENST00000559556 DYDC2Q96IM9 177 aa14.6□□□□□ -0.07
TPM1-220ENST00000559556 HERC2P3Q9BVR0 1158 aa14.6□□□□□ -0.07
TPM1-220ENST00000559556 XPNPEP1Q9NQW7 623 aa14.6□□□□□ -0.07
TPM1-220ENST00000559556 MRPL17Q9NRX2 175 aaKnown RBP14.6□□□□□ -0.07
TPM1-220ENST00000559556 IPPQ9Y573 584 aa14.6□□□□□ -0.07
TPM1-220ENST00000559556 TCHHQ07283 1943 aa14.6□□□□□ -0.07
TPM1-220ENST00000559556 DENND4CQ5VZ89 1909 aa14.6□□□□□ -0.07
TPM1-220ENST00000559556 ZNF638Q14966 1978 aaKnown RBP14.6□□□□□ -0.07
TPM1-220ENST00000559556 ZMYM2Q9UBW7 1377 aa14.6□□□□□ -0.07
TPM1-220ENST00000559556 FAM205CA6NFA0 338 aa14.59□□□□□ -0.07
TPM1-220ENST00000559556 ARL5CA6NH57 179 aa14.59□□□□□ -0.07
TPM1-220ENST00000559556 SPDYE4A6NLX3 237 aa14.59□□□□□ -0.07
TPM1-220ENST00000559556 H0Y858 1186 aa14.59□□□□□ -0.07
TPM1-220ENST00000559556 ZBTB39O15060 712 aa14.59□□□□□ -0.07
TPM1-220ENST00000559556 CTDNEP1O95476 244 aa14.59□□□□□ -0.07
TPM1-220ENST00000559556 URODP06132 367 aa14.59□□□□□ -0.07
TPM1-220ENST00000559556 ITGA4P13612 1032 aa14.59□□□□□ -0.07
TPM1-220ENST00000559556 CLCN5P51795 746 aa14.59□□□□□ -0.07
TPM1-220ENST00000559556 CYP4A11Q02928 519 aa14.59□□□□□ -0.07
TPM1-220ENST00000559556 POU5F1BQ06416 359 aa14.59□□□□□ -0.07
TPM1-220ENST00000559556 CTTNQ14247 550 aaKnown RBP14.59□□□□□ -0.07
TPM1-220ENST00000559556 EARS2Q5JPH6 523 aaKnown RBP14.59□□□□□ -0.07
TPM1-220ENST00000559556 ASTLQ6HA08 431 aaPredicted RBP14.59□□□□□ -0.07
TPM1-220ENST00000559556 OTOP3Q7RTS5 596 aa14.59□□□□□ -0.07
TPM1-220ENST00000559556 COLGALT2Q8IYK4 626 aa14.59□□□□□ -0.07
TPM1-220ENST00000559556 CMASQ8NFW8 434 aaPredicted RBP14.59□□□□□ -0.07
TPM1-220ENST00000559556 TNFRSF25Q93038 417 aa14.59□□□□□ -0.07
TPM1-220ENST00000559556 EIF2AQ9BY44 585 aaKnown RBP14.59□□□□□ -0.07
TPM1-220ENST00000559556 RHOBTB2Q9BYZ6 727 aa14.59□□□□□ -0.07
TPM1-220ENST00000559556 MARCH6O60337 910 aa14.58□□□□□ -0.08
TPM1-220ENST00000559556 LYPLA2O95372 231 aa14.58□□□□□ -0.08
TPM1-220ENST00000559556 BAG4O95429 457 aaKnown RBP14.58□□□□□ -0.08
TPM1-220ENST00000559556 ADH1AP07327 375 aa14.58□□□□□ -0.08
TPM1-220ENST00000559556 AMHR2Q16671 573 aa14.58□□□□□ -0.08
TPM1-220ENST00000559556 RPS6KC1Q96S38 1066 aa14.58□□□□□ -0.08
TPM1-220ENST00000559556 NFKBIZQ9BYH8 718 aa14.58□□□□□ -0.08
TPM1-220ENST00000559556 CSRNP2Q9H175 543 aa14.58□□□□□ -0.08
TPM1-220ENST00000559556 MAN1C1Q9NR34 630 aa14.58□□□□□ -0.08
TPM1-220ENST00000559556 TPCN1Q9ULQ1 816 aa14.58□□□□□ -0.08
TPM1-220ENST00000559556 DUSP12Q9UNI6 340 aa14.58□□□□□ -0.08
TPM1-220ENST00000559556 SSX2IPQ9Y2D8 614 aa14.58□□□□□ -0.08
TPM1-220ENST00000559556 PRG3Q9Y2Y8 225 aaPredicted RBP14.58□□□□□ -0.08
TPM1-220ENST00000559556 TICRRQ7Z2Z1 1910 aa14.58□□□□□ -0.08
TPM1-220ENST00000559556 KIF26AQ9ULI4 1882 aaPredicted RBP14.57□□□□□ -0.08
TPM1-220ENST00000559556 SPAG17Q6Q759 2223 aa14.57□□□□□ -0.08
TPM1-220ENST00000559556 C2CD2LO14523 706 aa14.57□□□□□ -0.08
TPM1-220ENST00000559556 SLITRK3O94933 977 aa14.57□□□□□ -0.08
TPM1-220ENST00000559556 PAPLNO95428 1278 aa14.57□□□□□ -0.08
TPM1-220ENST00000559556 KRT2P35908 639 aa14.57□□□□□ -0.08
TPM1-220ENST00000559556 MLH1P40692 756 aa14.57□□□□□ -0.08
TPM1-220ENST00000559556 NBL1P41271 181 aa14.57□□□□□ -0.08
TPM1-220ENST00000559556 GLUD2P49448 558 aa14.57□□□□□ -0.08
TPM1-220ENST00000559556 AK2P54819 239 aa14.57□□□□□ -0.08
TPM1-220ENST00000559556 MBTD1Q05BQ5 628 aa14.57□□□□□ -0.08
TPM1-220ENST00000559556 NR5A1Q13285 461 aa14.57□□□□□ -0.08
TPM1-220ENST00000559556 TDGQ13569 410 aa14.57□□□□□ -0.08
TPM1-220ENST00000559556 CAPSQ13938 189 aa14.57□□□□□ -0.08
TPM1-220ENST00000559556 TFDP1Q14186 410 aa14.57□□□□□ -0.08
TPM1-220ENST00000559556 KIAA0319Q5VV43 1072 aa14.57□□□□□ -0.08
TPM1-220ENST00000559556 CWF19L1Q69YN2 538 aaKnown RBP14.57□□□□□ -0.08
TPM1-220ENST00000559556 CYP26C1Q6V0L0 522 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms