RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 UBE3CQ15386 1083 aa4.55□□□□□ -1.68
CASC4-210ENST00000559550 ABCB5Q2M3G0 1257 aa4.55□□□□□ -1.68
CASC4-210ENST00000559550 MUM1Q2TAK8 710 aa4.55□□□□□ -1.68
CASC4-210ENST00000559550 GAGE13Q4V321 117 aa4.55□□□□□ -1.68
CASC4-210ENST00000559550 Q6ZSN1 163 aa4.55□□□□□ -1.68
CASC4-210ENST00000559550 GLB1L2Q8IW92 636 aa4.55□□□□□ -1.68
CASC4-210ENST00000559550 RPUSD2Q8IZ73 545 aaKnown RBP4.55□□□□□ -1.68
CASC4-210ENST00000559550 RAX2Q96IS3 184 aa4.55□□□□□ -1.68
CASC4-210ENST00000559550 IL23AQ9NPF7 189 aa4.55□□□□□ -1.68
CASC4-210ENST00000559550 DNAJC28Q9NX36 388 aa4.55□□□□□ -1.68
CASC4-210ENST00000559550 PLA2G3Q9NZ20 509 aa4.55□□□□□ -1.68
CASC4-210ENST00000559550 NCDNQ9UBB6 729 aa4.55□□□□□ -1.68
CASC4-210ENST00000559550 HECAQ9UBI9 543 aaPredicted RBP4.55□□□□□ -1.68
CASC4-210ENST00000559550 TRHDEQ9UKU6 1024 aa4.55□□□□□ -1.68
CASC4-210ENST00000559550 MTSS1O43312 755 aa4.54□□□□□ -1.68
CASC4-210ENST00000559550 STC2O76061 302 aa4.54□□□□□ -1.68
CASC4-210ENST00000559550 JUNP05412 331 aaKnown RBP4.54□□□□□ -1.68
CASC4-210ENST00000559550 OSMP13725 252 aa4.54□□□□□ -1.68
CASC4-210ENST00000559550 CANXP27824 592 aaKnown RBP4.54□□□□□ -1.68
CASC4-210ENST00000559550 MTNR1BP49286 362 aa4.54□□□□□ -1.68
CASC4-210ENST00000559550 MRPS9P82933 396 aaKnown RBP4.54□□□□□ -1.68
CASC4-210ENST00000559550 KRT40Q6A162 431 aa4.54□□□□□ -1.68
CASC4-210ENST00000559550 ABHD15Q6UXT9 468 aa4.54□□□□□ -1.68
CASC4-210ENST00000559550 TAS1R1Q7RTX1 841 aa4.54□□□□□ -1.68
CASC4-210ENST00000559550 AUTS2Q8WXX7 1259 aa4.54□□□□□ -1.68
CASC4-210ENST00000559550 MTMR8Q96EF0 704 aa4.54□□□□□ -1.68
CASC4-210ENST00000559550 NELFAQ9H3P2 528 aa4.54□□□□□ -1.68
CASC4-210ENST00000559550 IFT122Q9HBG6 1241 aa4.54□□□□□ -1.68
CASC4-210ENST00000559550 MSL2Q9HCI7 577 aa4.54□□□□□ -1.68
CASC4-210ENST00000559550 SHROOM4Q9ULL8 1493 aa4.54□□□□□ -1.68
CASC4-210ENST00000559550 GABRDO14764 452 aa4.53□□□□□ -1.68
CASC4-210ENST00000559550 PRAMEF4O60810 478 aa4.53□□□□□ -1.68
CASC4-210ENST00000559550 MT-CO1P00395 513 aa4.53□□□□□ -1.68
CASC4-210ENST00000559550 ACO1P21399 889 aaKnown RBP4.53□□□□□ -1.68
CASC4-210ENST00000559550 COMTP21964 271 aa4.53□□□□□ -1.68
CASC4-210ENST00000559550 CTSSP25774 331 aa4.53□□□□□ -1.68
CASC4-210ENST00000559550 CASRP41180 1078 aa4.53□□□□□ -1.68
CASC4-210ENST00000559550 ITKQ08881 620 aa4.53□□□□□ -1.68
CASC4-210ENST00000559550 ADRM1Q16186 407 aa4.53□□□□□ -1.68
CASC4-210ENST00000559550 SYDE2Q5VT97 1194 aa4.53□□□□□ -1.68
CASC4-210ENST00000559550 RNF207Q6ZRF8 634 aa4.53□□□□□ -1.68
CASC4-210ENST00000559550 POLNQ7Z5Q5 900 aa4.53□□□□□ -1.68
CASC4-210ENST00000559550 DNAJC10Q8IXB1 793 aa4.53□□□□□ -1.68
CASC4-210ENST00000559550 CMTM4Q8IZR5 234 aa4.53□□□□□ -1.68
CASC4-210ENST00000559550 LILRA3Q8N6C8 439 aaPredicted RBP4.53□□□□□ -1.68
CASC4-210ENST00000559550 GLB1L3Q8NCI6 653 aaPredicted RBP4.53□□□□□ -1.68
CASC4-210ENST00000559550 ZCRB1Q8TBF4 217 aaKnown RBP4.53□□□□□ -1.68
CASC4-210ENST00000559550 VOPP1Q96AW1 172 aa4.53□□□□□ -1.68
CASC4-210ENST00000559550 SLC2A13Q96QE2 648 aa4.53□□□□□ -1.68
CASC4-210ENST00000559550 BRINP2Q9C0B6 783 aa4.53□□□□□ -1.68
CASC4-210ENST00000559550 ENKD1Q9H0I2 346 aa4.53□□□□□ -1.68
CASC4-210ENST00000559550 DMRT3Q9NQL9 472 aa4.53□□□□□ -1.68
CASC4-210ENST00000559550 TLR9Q9NR96 1032 aa4.53□□□□□ -1.68
CASC4-210ENST00000559550 RCAN3Q9UKA8 241 aa4.53□□□□□ -1.68
CASC4-210ENST00000559550 SH3BP1Q9Y3L3 701 aa4.53□□□□□ -1.68
CASC4-210ENST00000559550 WASHC2AQ641Q2 1341 aa4.52□□□□□ -1.69
CASC4-210ENST00000559550 WASHC2CQ9Y4E1 1318 aa4.52□□□□□ -1.69
CASC4-210ENST00000559550 TRIM75PA6NK02 468 aa4.52□□□□□ -1.69
CASC4-210ENST00000559550 FZD9O00144 591 aa4.52□□□□□ -1.69
CASC4-210ENST00000559550 PCDHGA12O60330 932 aa4.52□□□□□ -1.69
CASC4-210ENST00000559550 ZNF202O95125 648 aa4.52□□□□□ -1.69
CASC4-210ENST00000559550 LTA4HP09960 611 aaKnown RBP4.52□□□□□ -1.69
CASC4-210ENST00000559550 MTHFD2P13995 350 aa4.52□□□□□ -1.69
CASC4-210ENST00000559550 FAM214AQ32MH5 1076 aa4.52□□□□□ -1.69
CASC4-210ENST00000559550 SPTY2D1Q68D10 685 aaPredicted RBP4.52□□□□□ -1.69
CASC4-210ENST00000559550 FAM111BQ6SJ93 734 aa4.52□□□□□ -1.69
CASC4-210ENST00000559550 MAMDC4Q6UXC1 1216 aa4.52□□□□□ -1.69
CASC4-210ENST00000559550 D2HGDHQ8N465 521 aa4.52□□□□□ -1.69
CASC4-210ENST00000559550 ZNF808Q8N4W9 903 aaPredicted RBP4.52□□□□□ -1.69
CASC4-210ENST00000559550 C1orf162Q8NEQ5 155 aaPredicted RBP4.52□□□□□ -1.69
CASC4-210ENST00000559550 SNX33Q8WV41 574 aa4.52□□□□□ -1.69
CASC4-210ENST00000559550 ADOQ96SZ5 270 aa4.52□□□□□ -1.69
CASC4-210ENST00000559550 TCF25Q9BQ70 676 aa4.52□□□□□ -1.69
CASC4-210ENST00000559550 ZNF277Q9NRM2 450 aaPredicted RBP4.52□□□□□ -1.69
CASC4-210ENST00000559550 SCOCQ9UIL1 159 aa4.52□□□□□ -1.69
CASC4-210ENST00000559550 NOP58Q9Y2X3 529 aaKnown RBP4.52□□□□□ -1.69
CASC4-210ENST00000559550 PCDHGA9Q9Y5G4 932 aaKnown RBP4.52□□□□□ -1.69
CASC4-210ENST00000559550 PCDHGA8Q9Y5G5 932 aa4.52□□□□□ -1.69
CASC4-210ENST00000559550 PCDHGA7Q9Y5G6 932 aa4.52□□□□□ -1.69
CASC4-210ENST00000559550 PCDHGA6Q9Y5G7 932 aa4.52□□□□□ -1.69
CASC4-210ENST00000559550 PCDHGA3Q9Y5H0 932 aa4.52□□□□□ -1.69
CASC4-210ENST00000559550 PCDHGA2Q9Y5H1 932 aa4.52□□□□□ -1.69
CASC4-210ENST00000559550 GPR45Q9Y5Y3 372 aa4.52□□□□□ -1.69
CASC4-210ENST00000559550 ALG1L2C9J202 215 aa4.51□□□□□ -1.69
CASC4-210ENST00000559550 PLSCR1O15162 318 aa4.51□□□□□ -1.69
CASC4-210ENST00000559550 ADCY6O43306 1168 aa4.51□□□□□ -1.69
CASC4-210ENST00000559550 AGXTP21549 392 aa4.51□□□□□ -1.69
CASC4-210ENST00000559550 NPEPPSP55786 919 aa4.51□□□□□ -1.69
CASC4-210ENST00000559550 KRTAP10-9P60411 292 aa4.51□□□□□ -1.69
CASC4-210ENST00000559550 MEF2AQ02078 507 aaPredicted RBP4.51□□□□□ -1.69
CASC4-210ENST00000559550 PPP3CAQ08209 521 aa4.51□□□□□ -1.69
CASC4-210ENST00000559550 CLUL1Q15846 466 aa4.51□□□□□ -1.69
CASC4-210ENST00000559550 FKBP15Q5T1M5 1219 aa4.51□□□□□ -1.69
CASC4-210ENST00000559550 PGM2L1Q6PCE3 622 aa4.51□□□□□ -1.69
CASC4-210ENST00000559550 BTNL9Q6UXG8 535 aa4.51□□□□□ -1.69
CASC4-210ENST00000559550 RIN2Q8WYP3 895 aaPredicted RBP4.51□□□□□ -1.69
CASC4-210ENST00000559550 EDAQ92838 391 aa4.51□□□□□ -1.69
CASC4-210ENST00000559550 ACE2Q9BYF1 805 aaPredicted RBP4.51□□□□□ -1.69
CASC4-210ENST00000559550 ASPSCR1Q9BZE9 553 aa4.51□□□□□ -1.69
CASC4-210ENST00000559550 TNKSO95271 1327 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms