RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 TDRD15B5MCY1 1934 aaKnown RBP19.15■□□□□ 0.66
TPM1-214ENST00000558544 NLRC5Q86WI3 1866 aa19.15■□□□□ 0.66
TPM1-214ENST00000558544 COL4A6Q14031 1691 aa19.15■□□□□ 0.66
TPM1-214ENST00000558544 NPTXRO95502 500 aa19.15■□□□□ 0.66
TPM1-214ENST00000558544 ABCD1P33897 745 aa19.15■□□□□ 0.66
TPM1-214ENST00000558544 SLC27A1Q6PCB7 646 aa19.15■□□□□ 0.66
TPM1-214ENST00000558544 ECHDC2Q86YB7 292 aa19.15■□□□□ 0.66
TPM1-214ENST00000558544 HERC6Q8IVU3 1022 aa19.15■□□□□ 0.66
TPM1-214ENST00000558544 PHOSPHO2Q8TCD6 241 aa19.15■□□□□ 0.66
TPM1-214ENST00000558544 TOP1MTQ969P6 601 aa19.15■□□□□ 0.66
TPM1-214ENST00000558544 STRA6Q9BX79 667 aa19.15■□□□□ 0.66
TPM1-214ENST00000558544 SLC39A2Q9NP94 309 aa19.15■□□□□ 0.66
TPM1-214ENST00000558544 LRFN2Q9ULH4 789 aa19.15■□□□□ 0.66
TPM1-214ENST00000558544 A0A0U1RQF3 1178 aa19.14■□□□□ 0.65
TPM1-214ENST00000558544 PRPF6O94906 941 aaKnown RBP19.14■□□□□ 0.65
TPM1-214ENST00000558544 MCM4P33991 863 aa19.14■□□□□ 0.65
TPM1-214ENST00000558544 RAB27AP51159 221 aa19.14■□□□□ 0.65
TPM1-214ENST00000558544 FAM189BP81408 668 aa19.14■□□□□ 0.65
TPM1-214ENST00000558544 KCNA1Q09470 495 aa19.14■□□□□ 0.65
TPM1-214ENST00000558544 ALCAMQ13740 583 aa19.14■□□□□ 0.65
TPM1-214ENST00000558544 L1TD1Q5T7N2 865 aaKnown RBP19.14■□□□□ 0.65
TPM1-214ENST00000558544 NPAS4Q8IUM7 802 aa19.14■□□□□ 0.65
TPM1-214ENST00000558544 ELOA2Q8IYF1 753 aaPredicted RBP19.14■□□□□ 0.65
TPM1-214ENST00000558544 RNF169Q8NCN4 708 aa19.14■□□□□ 0.65
TPM1-214ENST00000558544 GPT2Q8TD30 523 aa19.14■□□□□ 0.65
TPM1-214ENST00000558544 CCDC47Q96A33 483 aaKnown RBP19.14■□□□□ 0.65
TPM1-214ENST00000558544 HVCN1Q96D96 273 aa19.14■□□□□ 0.65
TPM1-214ENST00000558544 TRAIPQ9BWF2 469 aa19.14■□□□□ 0.65
TPM1-214ENST00000558544 TRIM6Q9C030 488 aaPredicted RBP19.14■□□□□ 0.65
TPM1-214ENST00000558544 TNFSF13BQ9Y275 285 aa19.14■□□□□ 0.65
TPM1-214ENST00000558544 PCDHB7Q9Y5E2 793 aa19.14■□□□□ 0.65
TPM1-214ENST00000558544 PCDHB2Q9Y5E7 798 aa19.14■□□□□ 0.65
TPM1-214ENST00000558544 PCDHB13Q9Y5F0 798 aa19.14■□□□□ 0.65
TPM1-214ENST00000558544 RALGAPA2Q2PPJ7 1873 aa19.13■□□□□ 0.65
TPM1-214ENST00000558544 HNRNPDLO14979 420 aaKnown RBP19.13■□□□□ 0.65
TPM1-214ENST00000558544 GJB5O95377 273 aa19.13■□□□□ 0.65
TPM1-214ENST00000558544 STAG3L1P0CL83 205 aa19.13■□□□□ 0.65
TPM1-214ENST00000558544 ATF7P17544 494 aaPredicted RBP19.13■□□□□ 0.65
TPM1-214ENST00000558544 LIG4P49917 911 aa19.13■□□□□ 0.65
TPM1-214ENST00000558544 RABGGTBP53611 331 aa19.13■□□□□ 0.65
TPM1-214ENST00000558544 CAMK4Q16566 473 aa19.13■□□□□ 0.65
TPM1-214ENST00000558544 ZNF568Q3ZCX4 644 aa19.13■□□□□ 0.65
TPM1-214ENST00000558544 ZPBP2Q6X784 338 aa19.13■□□□□ 0.65
TPM1-214ENST00000558544 STXBP4Q6ZWJ1 553 aa19.13■□□□□ 0.65
TPM1-214ENST00000558544 KIAA0895Q8NCT3 520 aa19.13■□□□□ 0.65
TPM1-214ENST00000558544 ZBTB45Q96K62 511 aaPredicted RBP19.13■□□□□ 0.65
TPM1-214ENST00000558544 ACCSQ96QU6 501 aa19.13■□□□□ 0.65
TPM1-214ENST00000558544 ADPGKQ9BRR6 497 aa19.13■□□□□ 0.65
TPM1-214ENST00000558544 ZBED2Q9BTP6 218 aa19.13■□□□□ 0.65
TPM1-214ENST00000558544 IKZF4Q9H2S9 585 aa19.13■□□□□ 0.65
TPM1-214ENST00000558544 TMEM161AQ9NX61 479 aa19.13■□□□□ 0.65
TPM1-214ENST00000558544 ANKFY1Q9P2R3 1169 aa19.13■□□□□ 0.65
TPM1-214ENST00000558544 IPPQ9Y573 584 aa19.13■□□□□ 0.65
TPM1-214ENST00000558544 PDCD11Q14690 1871 aaKnown RBP19.12■□□□□ 0.65
TPM1-214ENST00000558544 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.12■□□□□ 0.65
TPM1-214ENST00000558544 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.12■□□□□ 0.65
TPM1-214ENST00000558544 RHOBTB3O94955 611 aa19.12■□□□□ 0.65
TPM1-214ENST00000558544 SMC2O95347 1197 aa19.12■□□□□ 0.65
TPM1-214ENST00000558544 HARSP12081 509 aaKnown RBP19.12■□□□□ 0.65
TPM1-214ENST00000558544 SKIP12755 728 aa19.12■□□□□ 0.65
TPM1-214ENST00000558544 STK4Q13043 487 aa19.12■□□□□ 0.65
TPM1-214ENST00000558544 PSMD2Q13200 908 aa19.12■□□□□ 0.65
TPM1-214ENST00000558544 KCNB1Q14721 858 aa19.12■□□□□ 0.65
TPM1-214ENST00000558544 EPM2AIP1Q7L775 607 aaPredicted RBP19.12■□□□□ 0.65
TPM1-214ENST00000558544 ZBTB33Q86T24 672 aa19.12■□□□□ 0.65
TPM1-214ENST00000558544 ZNF598Q86UK7 904 aaKnown RBP19.12■□□□□ 0.65
TPM1-214ENST00000558544 CRIPAKQ8N1N5 446 aa19.12■□□□□ 0.65
TPM1-214ENST00000558544 SMG8Q8ND04 991 aaKnown RBP19.12■□□□□ 0.65
TPM1-214ENST00000558544 LPPQ93052 612 aa19.12■□□□□ 0.65
TPM1-214ENST00000558544 SMARCE1Q969G3 411 aa19.12■□□□□ 0.65
TPM1-214ENST00000558544 CDT1Q9H211 546 aa19.12■□□□□ 0.65
TPM1-214ENST00000558544 NXF3Q9H4D5 531 aaKnown RBP19.12■□□□□ 0.65
TPM1-214ENST00000558544 ELAC1Q9H777 363 aaKnown RBP19.12■□□□□ 0.65
TPM1-214ENST00000558544 HES2Q9Y543 173 aa19.12■□□□□ 0.65
TPM1-214ENST00000558544 PCDHA5Q9Y5H7 936 aa19.12■□□□□ 0.65
TPM1-214ENST00000558544 ZMYM2Q9UBW7 1377 aa19.11■□□□□ 0.65
TPM1-214ENST00000558544 ANK1P16157 1881 aa19.11■□□□□ 0.65
TPM1-214ENST00000558544 MEIS3P2A8K0S8 358 aa19.11■□□□□ 0.65
TPM1-214ENST00000558544 TISP43B9A030 160 aa19.11■□□□□ 0.65
TPM1-214ENST00000558544 ABLIM1O14639 778 aa19.11■□□□□ 0.65
TPM1-214ENST00000558544 EIF3DO15371 548 aaKnown RBP eCLIP19.11■□□□□ 0.65
TPM1-214ENST00000558544 TLL1O43897 1013 aa19.11■□□□□ 0.65
TPM1-214ENST00000558544 ZNF623O75123 536 aa19.11■□□□□ 0.65
TPM1-214ENST00000558544 TOM1L1O75674 476 aa19.11■□□□□ 0.65
TPM1-214ENST00000558544 PIGRP01833 764 aa19.11■□□□□ 0.65
TPM1-214ENST00000558544 PROZP22891 400 aa19.11■□□□□ 0.65
TPM1-214ENST00000558544 MATR3P43243 847 aaKnown RBP eCLIP19.11■□□□□ 0.65
TPM1-214ENST00000558544 GATMP50440 423 aa19.11■□□□□ 0.65
TPM1-214ENST00000558544 DCAF4L1Q3SXM0 396 aa19.11■□□□□ 0.65
TPM1-214ENST00000558544 SLC39A4Q6P5W5 647 aa19.11■□□□□ 0.65
TPM1-214ENST00000558544 MPZL3Q6UWV2 235 aa19.11■□□□□ 0.65
TPM1-214ENST00000558544 SYCP3Q8IZU3 236 aa19.11■□□□□ 0.65
TPM1-214ENST00000558544 SCFD1Q8WVM8 642 aa19.11■□□□□ 0.65
TPM1-214ENST00000558544 TCHPQ9BT92 498 aa19.11■□□□□ 0.65
TPM1-214ENST00000558544 APOL6Q9BWW8 343 aa19.11■□□□□ 0.65
TPM1-214ENST00000558544 CLSTN2Q9H4D0 955 aa19.11■□□□□ 0.65
TPM1-214ENST00000558544 PTPRHQ9HD43 1115 aa19.11■□□□□ 0.65
TPM1-214ENST00000558544 RNF216Q9NWF9 866 aaPredicted RBP19.11■□□□□ 0.65
TPM1-214ENST00000558544 EXOC7Q9UPT5 735 aa19.11■□□□□ 0.65
TPM1-214ENST00000558544 UBE4BO95155 1302 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms