RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 TSHZ1Q6ZSZ6 1077 aa13.57□□□□□ -0.24
TPM1-209ENST00000558072 CATSPER4Q7RTX7 472 aa13.57□□□□□ -0.24
TPM1-209ENST00000558072 DHX40Q8IX18 779 aaKnown RBP13.57□□□□□ -0.24
TPM1-209ENST00000558072 TCHPQ9BT92 498 aa13.57□□□□□ -0.24
TPM1-209ENST00000558072 KIFC3Q9BVG8 833 aa13.57□□□□□ -0.24
TPM1-209ENST00000558072 SRRTQ9BXP5 876 aaKnown RBP13.57□□□□□ -0.24
TPM1-209ENST00000558072 FGFBP2Q9BYJ0 223 aa13.57□□□□□ -0.24
TPM1-209ENST00000558072 CCDC113Q9H0I3 377 aa13.57□□□□□ -0.24
TPM1-209ENST00000558072 CHST12Q9NRB3 414 aa13.57□□□□□ -0.24
TPM1-209ENST00000558072 AGPAT3Q9NRZ7 376 aa13.57□□□□□ -0.24
TPM1-209ENST00000558072 TNFSF13BQ9Y275 285 aa13.57□□□□□ -0.24
TPM1-209ENST00000558072 STYXL1Q9Y6J8 313 aa13.57□□□□□ -0.24
TPM1-209ENST00000558072 TANC1Q9C0D5 1861 aa13.57□□□□□ -0.24
TPM1-209ENST00000558072 CBFA2T2O43439 604 aa13.56□□□□□ -0.24
TPM1-209ENST00000558072 NR3C1P04150 777 aa13.56□□□□□ -0.24
TPM1-209ENST00000558072 PSMC2P35998 433 aaKnown RBP13.56□□□□□ -0.24
TPM1-209ENST00000558072 MATR3P43243 847 aaKnown RBP eCLIP13.56□□□□□ -0.24
TPM1-209ENST00000558072 STX17P56962 302 aa13.56□□□□□ -0.24
TPM1-209ENST00000558072 KIZQ2M2Z5 673 aa13.56□□□□□ -0.24
TPM1-209ENST00000558072 DCAF4L1Q3SXM0 396 aa13.56□□□□□ -0.24
TPM1-209ENST00000558072 NOTUMQ6P988 496 aa13.56□□□□□ -0.24
TPM1-209ENST00000558072 LUZP1Q86V48 1076 aa13.56□□□□□ -0.24
TPM1-209ENST00000558072 ZC3H3Q8IXZ2 948 aaKnown RBP13.56□□□□□ -0.24
TPM1-209ENST00000558072 HACE1Q8IYU2 909 aa13.56□□□□□ -0.24
TPM1-209ENST00000558072 XXYLT1Q8NBI6 393 aa13.56□□□□□ -0.24
TPM1-209ENST00000558072 RNF214Q8ND24 703 aa13.56□□□□□ -0.24
TPM1-209ENST00000558072 POMGNT1Q8WZA1 660 aa13.56□□□□□ -0.24
TPM1-209ENST00000558072 CDHR5Q9HBB8 845 aa13.56□□□□□ -0.24
TPM1-209ENST00000558072 GINS2Q9Y248 185 aa13.56□□□□□ -0.24
TPM1-209ENST00000558072 CDY2AQ9Y6F7 541 aa13.56□□□□□ -0.24
TPM1-209ENST00000558072 ADGRA3Q8IWK6 1321 aa13.56□□□□□ -0.24
TPM1-209ENST00000558072 CNTNAP2Q9UHC6 1331 aa13.56□□□□□ -0.24
TPM1-209ENST00000558072 SCN5AQ14524 2016 aa13.56□□□□□ -0.24
TPM1-209ENST00000558072 FSD2A1L4K1 749 aa13.55□□□□□ -0.24
TPM1-209ENST00000558072 TGFB1I1O43294 461 aa13.55□□□□□ -0.24
TPM1-209ENST00000558072 STX10O60499 249 aa13.55□□□□□ -0.24
TPM1-209ENST00000558072 EXOC3O60645 756 aa13.55□□□□□ -0.24
TPM1-209ENST00000558072 CSDE1O75534 798 aaKnown RBP13.55□□□□□ -0.24
TPM1-209ENST00000558072 RPS6KA5O75582 802 aa13.55□□□□□ -0.24
TPM1-209ENST00000558072 CD4P01730 458 aa13.55□□□□□ -0.24
TPM1-209ENST00000558072 SKIP12755 728 aa13.55□□□□□ -0.24
TPM1-209ENST00000558072 KRT13P13646 458 aa13.55□□□□□ -0.24
TPM1-209ENST00000558072 SELPP16109 830 aa13.55□□□□□ -0.24
TPM1-209ENST00000558072 SURF1Q15526 300 aa13.55□□□□□ -0.24
TPM1-209ENST00000558072 TRIM71Q2Q1W2 868 aaKnown RBP13.55□□□□□ -0.24
TPM1-209ENST00000558072 CCDC40Q4G0X9 1142 aa13.55□□□□□ -0.24
TPM1-209ENST00000558072 ATF7IP2Q5U623 682 aa13.55□□□□□ -0.24
TPM1-209ENST00000558072 MPZL3Q6UWV2 235 aa13.55□□□□□ -0.24
TPM1-209ENST00000558072 FRMD5Q7Z6J6 570 aa13.55□□□□□ -0.24
TPM1-209ENST00000558072 GAS2L3Q86XJ1 694 aa13.55□□□□□ -0.24
TPM1-209ENST00000558072 C7orf61Q8IZ16 206 aa13.55□□□□□ -0.24
TPM1-209ENST00000558072 GLIS3Q8NEA6 775 aa13.55□□□□□ -0.24
TPM1-209ENST00000558072 OSMRQ99650 979 aa13.55□□□□□ -0.24
TPM1-209ENST00000558072 ACO2Q99798 780 aaKnown RBP13.55□□□□□ -0.24
TPM1-209ENST00000558072 PPP1R12CQ9BZL4 782 aa13.55□□□□□ -0.24
TPM1-209ENST00000558072 RBSNQ9H1K0 784 aa13.55□□□□□ -0.24
TPM1-209ENST00000558072 GRPEL1Q9HAV7 217 aa13.55□□□□□ -0.24
TPM1-209ENST00000558072 FANCLQ9NW38 375 aa13.55□□□□□ -0.24
TPM1-209ENST00000558072 DMAC2Q9NW81 257 aa13.55□□□□□ -0.24
TPM1-209ENST00000558072 USP20Q9Y2K6 914 aa13.55□□□□□ -0.24
TPM1-209ENST00000558072 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.55□□□□□ -0.24
TPM1-209ENST00000558072 A0A1B0GUA9 196 aa13.54□□□□□ -0.24
TPM1-209ENST00000558072 ZNF233A6NK53 670 aa13.54□□□□□ -0.24
TPM1-209ENST00000558072 SERPINC1P01008 464 aa13.54□□□□□ -0.24
TPM1-209ENST00000558072 MCF2P10911 925 aa13.54□□□□□ -0.24
TPM1-209ENST00000558072 CKBP12277 381 aa13.54□□□□□ -0.24
TPM1-209ENST00000558072 ZSCAN20P17040 1043 aaPredicted RBP13.54□□□□□ -0.24
TPM1-209ENST00000558072 FGFR4P22455 802 aa13.54□□□□□ -0.24
TPM1-209ENST00000558072 ITGB8P26012 769 aa13.54□□□□□ -0.24
TPM1-209ENST00000558072 HOXD13P35453 343 aa13.54□□□□□ -0.24
TPM1-209ENST00000558072 MARSP56192 900 aaKnown RBP13.54□□□□□ -0.24
TPM1-209ENST00000558072 FAAP100Q0VG06 881 aa13.54□□□□□ -0.24
TPM1-209ENST00000558072 NOLC1Q14978 699 aaKnown RBP eCLIP13.54□□□□□ -0.24
TPM1-209ENST00000558072 NCAPHQ15003 741 aa13.54□□□□□ -0.24
TPM1-209ENST00000558072 INTS8Q75QN2 995 aaKnown RBP13.54□□□□□ -0.24
TPM1-209ENST00000558072 GPD1LQ8N335 351 aa13.54□□□□□ -0.24
TPM1-209ENST00000558072 TSPAN18Q96SJ8 248 aa13.54□□□□□ -0.24
TPM1-209ENST00000558072 DUSP9Q99956 384 aaKnown RBP13.54□□□□□ -0.24
TPM1-209ENST00000558072 MSTO1Q9BUK6 570 aa13.54□□□□□ -0.24
TPM1-209ENST00000558072 FTHL17Q9BXU8 183 aa13.54□□□□□ -0.24
TPM1-209ENST00000558072 IKZF4Q9H2S9 585 aa13.54□□□□□ -0.24
TPM1-209ENST00000558072 PRDM5Q9NQX1 630 aaPredicted RBP13.54□□□□□ -0.24
TPM1-209ENST00000558072 ARMCX3Q9UH62 379 aaPredicted RBP13.54□□□□□ -0.24
TPM1-209ENST00000558072 AGO2Q9UKV8 859 aaKnown RBP13.54□□□□□ -0.24
TPM1-209ENST00000558072 LTBP2Q14767 1821 aa13.54□□□□□ -0.24
TPM1-209ENST00000558072 A0A0B4J269 797 aa13.53□□□□□ -0.24
TPM1-209ENST00000558072 TRIM43BA6NCK2 446 aa13.53□□□□□ -0.24
TPM1-209ENST00000558072 TRIM49BA6NDI0 452 aa13.53□□□□□ -0.24
TPM1-209ENST00000558072 LRRC10BA6NIK2 292 aa13.53□□□□□ -0.24
TPM1-209ENST00000558072 KCNJ18B7U540 433 aa13.53□□□□□ -0.24
TPM1-209ENST00000558072 OGTO15294 1046 aa13.53□□□□□ -0.24
TPM1-209ENST00000558072 EXTL3O43909 919 aa13.53□□□□□ -0.24
TPM1-209ENST00000558072 EDN1P05305 212 aa13.53□□□□□ -0.24
TPM1-209ENST00000558072 ZNF18P17022 549 aa13.53□□□□□ -0.24
TPM1-209ENST00000558072 SYN1P17600 705 aa13.53□□□□□ -0.24
TPM1-209ENST00000558072 RFC2P35250 354 aa13.53□□□□□ -0.24
TPM1-209ENST00000558072 MTIF2P46199 727 aaKnown RBP13.53□□□□□ -0.24
TPM1-209ENST00000558072 MCL1Q07820 350 aa13.53□□□□□ -0.24
TPM1-209ENST00000558072 MGAT3Q09327 533 aa13.53□□□□□ -0.24
TPM1-209ENST00000558072 KCNA1Q09470 495 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms