RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 TBX20Q9UMR3 447 aa28.08■■■□□ 2.09
SMAD6-202ENST00000557916 YBX2Q9Y2T7 364 aaKnown RBP28.08■■■□□ 2.09
SMAD6-202ENST00000557916 GTPBP6O43824 516 aaPredicted RBP28.07■■■□□ 2.08
SMAD6-202ENST00000557916 ZNF623O75123 536 aa28.07■■■□□ 2.08
SMAD6-202ENST00000557916 DGKIO75912 1065 aa28.07■■■□□ 2.08
SMAD6-202ENST00000557916 MYL1P05976 194 aa28.07■■■□□ 2.08
SMAD6-202ENST00000557916 DNAJB2P25686 324 aa28.07■■■□□ 2.08
SMAD6-202ENST00000557916 ABCD1P33897 745 aa28.07■■■□□ 2.08
SMAD6-202ENST00000557916 GTF2BQ00403 316 aa28.07■■■□□ 2.08
SMAD6-202ENST00000557916 KANK3Q6NY19 840 aa28.07■■■□□ 2.08
SMAD6-202ENST00000557916 ZNF598Q86UK7 904 aaKnown RBP28.07■■■□□ 2.08
SMAD6-202ENST00000557916 LRCH3Q96II8 777 aa28.07■■■□□ 2.08
SMAD6-202ENST00000557916 ACO2Q99798 780 aaKnown RBP28.07■■■□□ 2.08
SMAD6-202ENST00000557916 TARS2Q9BW92 718 aaKnown RBP28.07■■■□□ 2.08
SMAD6-202ENST00000557916 PVALEFA0A1B0GWK0 134 aa28.06■■■□□ 2.08
SMAD6-202ENST00000557916 NR1I2O75469 434 aa28.06■■■□□ 2.08
SMAD6-202ENST00000557916 NPTXRO95502 500 aa28.06■■■□□ 2.08
SMAD6-202ENST00000557916 ZC2HC1CQ53FD0 456 aaPredicted RBP28.06■■■□□ 2.08
SMAD6-202ENST00000557916 TRIM6Q9C030 488 aaPredicted RBP28.06■■■□□ 2.08
SMAD6-202ENST00000557916 TNFSF13BQ9Y275 285 aa28.06■■■□□ 2.08
SMAD6-202ENST00000557916 ATF7P17544 494 aaPredicted RBP28.05■■■□□ 2.08
SMAD6-202ENST00000557916 EEF1DP3Q658K8 133 aa28.05■■■□□ 2.08
SMAD6-202ENST00000557916 ADPGKQ9BRR6 497 aa28.05■■■□□ 2.08
SMAD6-202ENST00000557916 NKX2-4Q9H2Z4 354 aa28.05■■■□□ 2.08
SMAD6-202ENST00000557916 LCHNA4D1U4 455 aa28.04■■■□□ 2.08
SMAD6-202ENST00000557916 GCNT3O95395 438 aa28.04■■■□□ 2.08
SMAD6-202ENST00000557916 CA3P07451 260 aa28.04■■■□□ 2.08
SMAD6-202ENST00000557916 GATMP50440 423 aa28.04■■■□□ 2.08
SMAD6-202ENST00000557916 MRPL10Q7Z7H8 261 aaKnown RBP28.04■■■□□ 2.08
SMAD6-202ENST00000557916 SMG8Q8ND04 991 aaKnown RBP28.04■■■□□ 2.08
SMAD6-202ENST00000557916 LPPQ93052 612 aa28.04■■■□□ 2.08
SMAD6-202ENST00000557916 TIFAQ96CG3 184 aa28.04■■■□□ 2.08
SMAD6-202ENST00000557916 ZNF689Q96CS4 500 aaPredicted RBP28.04■■■□□ 2.08
SMAD6-202ENST00000557916 PGBD4Q96DM1 585 aa28.04■■■□□ 2.08
SMAD6-202ENST00000557916 BICD1Q96G01 975 aa28.04■■■□□ 2.08
SMAD6-202ENST00000557916 TIGD1Q96MW7 591 aa28.04■■■□□ 2.08
SMAD6-202ENST00000557916 IPPQ9Y573 584 aa28.04■■■□□ 2.08
SMAD6-202ENST00000557916 HOXA2O43364 376 aa28.03■■■□□ 2.08
SMAD6-202ENST00000557916 PRR29P0C7W0 189 aa28.03■■■□□ 2.08
SMAD6-202ENST00000557916 FGFR1P11362 822 aa28.03■■■□□ 2.08
SMAD6-202ENST00000557916 ZPBP2Q6X784 338 aa28.03■■■□□ 2.08
SMAD6-202ENST00000557916 HPS3Q969F9 1004 aa28.03■■■□□ 2.08
SMAD6-202ENST00000557916 STRA6Q9BX79 667 aa28.03■■■□□ 2.08
SMAD6-202ENST00000557916 RC3H2Q9HBD1 1191 aaKnown RBP28.03■■■□□ 2.08
SMAD6-202ENST00000557916 PCDHB13Q9Y5F0 798 aa28.03■■■□□ 2.08
SMAD6-202ENST00000557916 KLRC4O43908 158 aa28.02■■■□□ 2.08
SMAD6-202ENST00000557916 KINO60870 393 aaKnown RBP28.02■■■□□ 2.08
SMAD6-202ENST00000557916 PPP1R37O75864 691 aa28.02■■■□□ 2.08
SMAD6-202ENST00000557916 FAM26FQ5R3K3 315 aa28.02■■■□□ 2.08
SMAD6-202ENST00000557916 MAP4K3Q8IVH8 894 aa28.02■■■□□ 2.08
SMAD6-202ENST00000557916 HVCN1Q96D96 273 aa28.02■■■□□ 2.08
SMAD6-202ENST00000557916 TCHPQ9BT92 498 aa28.02■■■□□ 2.08
SMAD6-202ENST00000557916 FGFBP2Q9BYJ0 223 aa28.02■■■□□ 2.08
SMAD6-202ENST00000557916 PTPRHQ9HD43 1115 aa28.02■■■□□ 2.08
SMAD6-202ENST00000557916 GBF1Q92538 1859 aa28.02■■■□□ 2.08
SMAD6-202ENST00000557916 MEIS3P2A8K0S8 358 aa28.01■■■□□ 2.08
SMAD6-202ENST00000557916 MYBP10242 640 aa28.01■■■□□ 2.08
SMAD6-202ENST00000557916 ITGA4P13612 1032 aa28.01■■■□□ 2.08
SMAD6-202ENST00000557916 FXR1P51114 621 aaKnown RBP eCLIP28.01■■■□□ 2.08
SMAD6-202ENST00000557916 CASP5P51878 434 aa28.01■■■□□ 2.08
SMAD6-202ENST00000557916 EHHADHQ08426 723 aa28.01■■■□□ 2.08
SMAD6-202ENST00000557916 DPYDQ12882 1025 aa28.01■■■□□ 2.08
SMAD6-202ENST00000557916 ALCAMQ13740 583 aa28.01■■■□□ 2.08
SMAD6-202ENST00000557916 BTG3Q14201 252 aaPredicted RBP28.01■■■□□ 2.08
SMAD6-202ENST00000557916 POSTNQ15063 836 aa28.01■■■□□ 2.08
SMAD6-202ENST00000557916 DCAF4L1Q3SXM0 396 aa28.01■■■□□ 2.08
SMAD6-202ENST00000557916 APBB1IPQ7Z5R6 666 aaPredicted RBP28.01■■■□□ 2.08
SMAD6-202ENST00000557916 SP7Q8TDD2 431 aaPredicted RBP28.01■■■□□ 2.08
SMAD6-202ENST00000557916 SLC28A3Q9HAS3 691 aa28.01■■■□□ 2.08
SMAD6-202ENST00000557916 RNF19AQ9NV58 838 aa28.01■■■□□ 2.08
SMAD6-202ENST00000557916 HES2Q9Y543 173 aa28.01■■■□□ 2.08
SMAD6-202ENST00000557916 TBKBP1A7MCY6 615 aa28.01■■■□□ 2.07
SMAD6-202ENST00000557916 HNRNPDLO14979 420 aaKnown RBP28.01■■■□□ 2.07
SMAD6-202ENST00000557916 TOM1L1O75674 476 aa28.01■■■□□ 2.07
SMAD6-202ENST00000557916 RPN1P04843 607 aaKnown RBP28.01■■■□□ 2.07
SMAD6-202ENST00000557916 LIG4P49917 911 aa28.01■■■□□ 2.07
SMAD6-202ENST00000557916 ZNF568Q3ZCX4 644 aa28.01■■■□□ 2.07
SMAD6-202ENST00000557916 PAN2Q504Q3 1202 aaKnown RBP28.01■■■□□ 2.07
SMAD6-202ENST00000557916 AGMOQ6ZNB7 445 aa28.01■■■□□ 2.07
SMAD6-202ENST00000557916 STXBP4Q6ZWJ1 553 aa28.01■■■□□ 2.07
SMAD6-202ENST00000557916 HACE1Q8IYU2 909 aa28.01■■■□□ 2.07
SMAD6-202ENST00000557916 ABI1Q8IZP0 508 aa28.01■■■□□ 2.07
SMAD6-202ENST00000557916 HELQQ8TDG4 1101 aa28.01■■■□□ 2.07
SMAD6-202ENST00000557916 ZBTB45Q96K62 511 aaPredicted RBP28.01■■■□□ 2.07
SMAD6-202ENST00000557916 TMEM117Q9H0C3 514 aa28.01■■■□□ 2.07
SMAD6-202ENST00000557916 RNF39Q9H2S5 420 aa28.01■■■□□ 2.07
SMAD6-202ENST00000557916 NXF3Q9H4D5 531 aaKnown RBP28.01■■■□□ 2.07
SMAD6-202ENST00000557916 EXOC1Q9NV70 894 aa28.01■■■□□ 2.07
SMAD6-202ENST00000557916 PIGRP01833 764 aa28■■■□□ 2.07
SMAD6-202ENST00000557916 PROZP22891 400 aa28■■■□□ 2.07
SMAD6-202ENST00000557916 KMT5BQ4FZB7 885 aa28■■■□□ 2.07
SMAD6-202ENST00000557916 CLLU1OSQ5K130 101 aa28■■■□□ 2.07
SMAD6-202ENST00000557916 L1TD1Q5T7N2 865 aaKnown RBP28■■■□□ 2.07
SMAD6-202ENST00000557916 PPP2R2DQ66LE6 453 aa28■■■□□ 2.07
SMAD6-202ENST00000557916 MPZL3Q6UWV2 235 aa28■■■□□ 2.07
SMAD6-202ENST00000557916 CMTR2Q8IYT2 770 aaKnown RBP28■■■□□ 2.07
SMAD6-202ENST00000557916 FIBCD1Q8N539 461 aa28■■■□□ 2.07
SMAD6-202ENST00000557916 ACCSQ96QU6 501 aa28■■■□□ 2.07
SMAD6-202ENST00000557916 APOL6Q9BWW8 343 aa28■■■□□ 2.07
SMAD6-202ENST00000557916 HOOK1Q9UJC3 728 aaKnown RBP28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms