RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, human

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPN1-208	ENST00000557702	PCDHA8	Q9Y5H6	950 aa		10.65	□□□□□ -0.7
PABPN1-208	ENST00000557702	LAMA5	O15230	3695 aa		10.64	□□□□□ -0.71
PABPN1-208	ENST00000557702	ASXL3	Q9C0F0	2248 aa		10.64	□□□□□ -0.71
PABPN1-208	ENST00000557702	DDX39A	O00148	427 aa	Known RBP	10.64	□□□□□ -0.71
PABPN1-208	ENST00000557702	ZNF623	O75123	536 aa		10.64	□□□□□ -0.71
PABPN1-208	ENST00000557702	CCNE2	O96020	404 aa		10.64	□□□□□ -0.71
PABPN1-208	ENST00000557702	HNRNPA1	P09651	372 aa	Known RBP eCLIP	10.64	□□□□□ -0.71
PABPN1-208	ENST00000557702	NMI	Q13287	307 aa	Predicted RBP	10.64	□□□□□ -0.71
PABPN1-208	ENST00000557702	SH3PXD2A	Q5TCZ1	1133 aa		10.64	□□□□□ -0.71
PABPN1-208	ENST00000557702	DAB2IP	Q5VWQ8	1189 aa		10.64	□□□□□ -0.71
PABPN1-208	ENST00000557702	GLYCTK	Q8IVS8	523 aa		10.64	□□□□□ -0.71
PABPN1-208	ENST00000557702	RNF168	Q8IYW5	571 aa	Predicted RBP	10.64	□□□□□ -0.71
PABPN1-208	ENST00000557702	LRRC71	Q8N4P6	559 aa		10.64	□□□□□ -0.71
PABPN1-208	ENST00000557702	LINC01465	Q8N7H1	131 aa		10.64	□□□□□ -0.71
PABPN1-208	ENST00000557702	ITFG1	Q8TB96	612 aa		10.64	□□□□□ -0.71
PABPN1-208	ENST00000557702	GCOM2	Q9BZD3	368 aa	Predicted RBP	10.64	□□□□□ -0.71
PABPN1-208	ENST00000557702	CHST7	Q9NS84	486 aa		10.64	□□□□□ -0.71
PABPN1-208	ENST00000557702	MARCH5	Q9NX47	278 aa		10.64	□□□□□ -0.71
PABPN1-208	ENST00000557702	FNIP2	Q9P278	1114 aa		10.64	□□□□□ -0.71
PABPN1-208	ENST00000557702	POLI	Q9UNA4	740 aa		10.64	□□□□□ -0.71
PABPN1-208	ENST00000557702	PRG3	Q9Y2Y8	225 aa	Predicted RBP	10.64	□□□□□ -0.71
PABPN1-208	ENST00000557702		K7ESF4	209 aa		10.63	□□□□□ -0.71
PABPN1-208	ENST00000557702	XYLB	O75191	536 aa		10.63	□□□□□ -0.71
PABPN1-208	ENST00000557702	EPN2	O95208	641 aa		10.63	□□□□□ -0.71
PABPN1-208	ENST00000557702	PAPSS2	O95340	614 aa	Predicted RBP	10.63	□□□□□ -0.71
PABPN1-208	ENST00000557702	POMC	P01189	267 aa		10.63	□□□□□ -0.71
PABPN1-208	ENST00000557702	CEACAM1	P13688	526 aa		10.63	□□□□□ -0.71
PABPN1-208	ENST00000557702	SFPQ	P23246	707 aa	Known RBP eCLIP	10.63	□□□□□ -0.71
PABPN1-208	ENST00000557702	OR1G1	P47890	313 aa		10.63	□□□□□ -0.71
PABPN1-208	ENST00000557702	CDC42EP1	Q00587	391 aa		10.63	□□□□□ -0.71
PABPN1-208	ENST00000557702	CREM	Q03060	361 aa		10.63	□□□□□ -0.71
PABPN1-208	ENST00000557702	UBE2S	Q16763	222 aa		10.63	□□□□□ -0.71
PABPN1-208	ENST00000557702	IMMT	Q16891	758 aa	Known RBP	10.63	□□□□□ -0.71
PABPN1-208	ENST00000557702	CEP55	Q53EZ4	464 aa		10.63	□□□□□ -0.71
PABPN1-208	ENST00000557702	PLA2G2C	Q5R387	149 aa		10.63	□□□□□ -0.71
PABPN1-208	ENST00000557702	PPM1L	Q5SGD2	360 aa		10.63	□□□□□ -0.71
PABPN1-208	ENST00000557702	LIN9	Q5TKA1	542 aa		10.63	□□□□□ -0.71
PABPN1-208	ENST00000557702	C19orf48	Q6RUI8	117 aa		10.63	□□□□□ -0.71
PABPN1-208	ENST00000557702	CACNA2D4	Q7Z3S7	1137 aa		10.63	□□□□□ -0.71
PABPN1-208	ENST00000557702	NPAS3	Q8IXF0	933 aa		10.63	□□□□□ -0.71
PABPN1-208	ENST00000557702	GPR65	Q8IYL9	337 aa		10.63	□□□□□ -0.71
PABPN1-208	ENST00000557702	PLA2G2F	Q9BZM2	168 aa		10.63	□□□□□ -0.71
PABPN1-208	ENST00000557702	VPS45	Q9NRW7	570 aa		10.63	□□□□□ -0.71
PABPN1-208	ENST00000557702	KCNH3	Q9ULD8	1083 aa		10.63	□□□□□ -0.71
PABPN1-208	ENST00000557702	PIN4	Q9Y237	131 aa	Known RBP	10.63	□□□□□ -0.71
PABPN1-208	ENST00000557702	GPSM3	Q9Y4H4	160 aa		10.63	□□□□□ -0.71
PABPN1-208	ENST00000557702	NEUROG3	Q9Y4Z2	214 aa		10.63	□□□□□ -0.71
PABPN1-208	ENST00000557702	PCDHGA5	Q9Y5G8	931 aa		10.63	□□□□□ -0.71
PABPN1-208	ENST00000557702	MAFB	Q9Y5Q3	323 aa	Predicted RBP	10.63	□□□□□ -0.71
PABPN1-208	ENST00000557702	ADAMTS20	P59510	1910 aa		10.62	□□□□□ -0.71
PABPN1-208	ENST00000557702	ERICH2	A1L162	156 aa		10.62	□□□□□ -0.71
PABPN1-208	ENST00000557702	CCL16	O15467	120 aa		10.62	□□□□□ -0.71
PABPN1-208	ENST00000557702	EFEMP2	O95967	443 aa		10.62	□□□□□ -0.71
PABPN1-208	ENST00000557702	CHRNB1	P11230	501 aa		10.62	□□□□□ -0.71
PABPN1-208	ENST00000557702	HOXA6	P31267	233 aa		10.62	□□□□□ -0.71
PABPN1-208	ENST00000557702	RAP1GAP	P47736	663 aa		10.62	□□□□□ -0.71
PABPN1-208	ENST00000557702	AFF1	P51825	1210 aa	Known RBP	10.62	□□□□□ -0.71
PABPN1-208	ENST00000557702	TROAP	Q12815	778 aa		10.62	□□□□□ -0.71
PABPN1-208	ENST00000557702	GAS6	Q14393	721 aa		10.62	□□□□□ -0.71
PABPN1-208	ENST00000557702	USP41	Q3LFD5	358 aa		10.62	□□□□□ -0.71
PABPN1-208	ENST00000557702	WDR5B	Q86VZ2	330 aa		10.62	□□□□□ -0.71
PABPN1-208	ENST00000557702	MBOAT7	Q96N66	472 aa		10.62	□□□□□ -0.71
PABPN1-208	ENST00000557702	INO80B	Q9C086	356 aa	Predicted RBP	10.62	□□□□□ -0.71
PABPN1-208	ENST00000557702	SMOC1	Q9H4F8	434 aa		10.62	□□□□□ -0.71
PABPN1-208	ENST00000557702	BRD9	Q9H8M2	597 aa		10.62	□□□□□ -0.71
PABPN1-208	ENST00000557702	RSAD1	Q9HA92	442 aa		10.62	□□□□□ -0.71
PABPN1-208	ENST00000557702	LY9	Q9HBG7	655 aa		10.62	□□□□□ -0.71
PABPN1-208	ENST00000557702	GDE1	Q9NZC3	331 aa		10.62	□□□□□ -0.71
PABPN1-208	ENST00000557702	PCDHB2	Q9Y5E7	798 aa		10.62	□□□□□ -0.71
PABPN1-208	ENST00000557702	SPAG17	Q6Q759	2223 aa		10.62	□□□□□ -0.71
PABPN1-208	ENST00000557702	C4orf47	A7E2U8	309 aa		10.61	□□□□□ -0.71
PABPN1-208	ENST00000557702	NR1I2	O75469	434 aa		10.61	□□□□□ -0.71
PABPN1-208	ENST00000557702	C8A	P07357	584 aa		10.61	□□□□□ -0.71
PABPN1-208	ENST00000557702	RPL17	P18621	184 aa	Known RBP	10.61	□□□□□ -0.71
PABPN1-208	ENST00000557702	HOXA9	P31269	272 aa		10.61	□□□□□ -0.71
PABPN1-208	ENST00000557702	MPL	P40238	635 aa		10.61	□□□□□ -0.71
PABPN1-208	ENST00000557702	PABPC1L	Q4VXU2	614 aa	Known RBP	10.61	□□□□□ -0.71
PABPN1-208	ENST00000557702	TANGO2	Q6ICL3	276 aa		10.61	□□□□□ -0.71
PABPN1-208	ENST00000557702	AGMO	Q6ZNB7	445 aa		10.61	□□□□□ -0.71
PABPN1-208	ENST00000557702	CYB5R4	Q7L1T6	521 aa		10.61	□□□□□ -0.71
PABPN1-208	ENST00000557702	COLGALT2	Q8IYK4	626 aa		10.61	□□□□□ -0.71
PABPN1-208	ENST00000557702	IRF7	Q92985	503 aa		10.61	□□□□□ -0.71
PABPN1-208	ENST00000557702	ELSPBP1	Q96BH3	223 aa		10.61	□□□□□ -0.71
PABPN1-208	ENST00000557702	FAM167A	Q96KS9	214 aa		10.61	□□□□□ -0.71
PABPN1-208	ENST00000557702	B3GALT6	Q96L58	329 aa		10.61	□□□□□ -0.71
PABPN1-208	ENST00000557702	EDEM2	Q9BV94	578 aa		10.61	□□□□□ -0.71
PABPN1-208	ENST00000557702	SPZ1	Q9BXG8	430 aa		10.61	□□□□□ -0.71
PABPN1-208	ENST00000557702	FBXW11	Q9UKB1	542 aa		10.61	□□□□□ -0.71
PABPN1-208	ENST00000557702	MSRB2	Q9Y3D2	182 aa		10.61	□□□□□ -0.71
PABPN1-208	ENST00000557702	MRPS23	Q9Y3D9	190 aa	Known RBP	10.61	□□□□□ -0.71
PABPN1-208	ENST00000557702	CNTNAP2	Q9UHC6	1331 aa		10.6	□□□□□ -0.71
PABPN1-208	ENST00000557702	MEIS1	O00470	390 aa		10.6	□□□□□ -0.71
PABPN1-208	ENST00000557702	IFIT3	O14879	490 aa	Known RBP	10.6	□□□□□ -0.71
PABPN1-208	ENST00000557702	HYAL3	O43820	417 aa	Predicted RBP	10.6	□□□□□ -0.71
PABPN1-208	ENST00000557702	RPP40	O75818	363 aa	Known RBP	10.6	□□□□□ -0.71
PABPN1-208	ENST00000557702	PSAP	P07602	524 aa		10.6	□□□□□ -0.71
PABPN1-208	ENST00000557702	CSRP1	P21291	193 aa	Known RBP	10.6	□□□□□ -0.71
PABPN1-208	ENST00000557702	SMARCA1	P28370	1054 aa		10.6	□□□□□ -0.71
PABPN1-208	ENST00000557702	PTGDR	Q13258	359 aa		10.6	□□□□□ -0.71
PABPN1-208	ENST00000557702	LRRC32	Q14392	662 aa		10.6	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms