RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 INPP4AQ96PE3 977 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-245ENST00000556958 UBL7Q96S82 380 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-245ENST00000556958 NT5C3AQ9H0P0 336 aa6.6□□□□□ -1.35
ATXN3-245ENST00000556958 SLC32A1Q9H598 525 aa6.6□□□□□ -1.35
ATXN3-245ENST00000556958 AZI2Q9H6S1 392 aa6.6□□□□□ -1.35
ATXN3-245ENST00000556958 LMAN1LQ9HAT1 526 aa6.6□□□□□ -1.35
ATXN3-245ENST00000556958 TCP11L1Q9NUJ3 509 aa6.6□□□□□ -1.35
ATXN3-245ENST00000556958 ZDHHC7Q9NXF8 308 aa6.6□□□□□ -1.35
ATXN3-245ENST00000556958 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.6□□□□□ -1.35
ATXN3-245ENST00000556958 RAI2Q9Y5P3 530 aa6.6□□□□□ -1.35
ATXN3-245ENST00000556958 SMG1Q96Q15 3661 aaKnown RBP6.6□□□□□ -1.35
ATXN3-245ENST00000556958 IGSF10Q6WRI0 2623 aa6.59□□□□□ -1.35
ATXN3-245ENST00000556958 C4orf47A7E2U8 309 aa6.59□□□□□ -1.35
ATXN3-245ENST00000556958 GCOM1H8Y6P7 765 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-245ENST00000556958 J3QKU1 62 aa6.59□□□□□ -1.35
ATXN3-245ENST00000556958 RNF113AO15541 343 aaKnown RBP6.59□□□□□ -1.35
ATXN3-245ENST00000556958 HYAL3O43820 417 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-245ENST00000556958 ORC4O43929 436 aa6.59□□□□□ -1.35
ATXN3-245ENST00000556958 DHX16O60231 1041 aaKnown RBP6.59□□□□□ -1.35
ATXN3-245ENST00000556958 ZC3H11AO75152 810 aaKnown RBP eCLIP6.59□□□□□ -1.35
ATXN3-245ENST00000556958 DXOO77932 396 aaKnown RBP6.59□□□□□ -1.35
ATXN3-245ENST00000556958 EPN2O95208 641 aa6.59□□□□□ -1.35
ATXN3-245ENST00000556958 NTRK1P04629 796 aa6.59□□□□□ -1.35
ATXN3-245ENST00000556958 POLR2MP0CAP2 368 aa6.59□□□□□ -1.35
ATXN3-245ENST00000556958 SNHG28P0DPA3 235 aa6.59□□□□□ -1.35
ATXN3-245ENST00000556958 PLA2G2AP14555 144 aa6.59□□□□□ -1.35
ATXN3-245ENST00000556958 HOXA6P31267 233 aa6.59□□□□□ -1.35
ATXN3-245ENST00000556958 CRYBB1P53674 252 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-245ENST00000556958 SRSF5Q13243 272 aaKnown RBP6.59□□□□□ -1.35
ATXN3-245ENST00000556958 DSC3Q14574 896 aa6.59□□□□□ -1.35
ATXN3-245ENST00000556958 CCDC6Q16204 474 aa6.59□□□□□ -1.35
ATXN3-245ENST00000556958 QRICH1Q2TAL8 776 aa6.59□□□□□ -1.35
ATXN3-245ENST00000556958 NLRX1Q86UT6 975 aa6.59□□□□□ -1.35
ATXN3-245ENST00000556958 ECHDC2Q86YB7 292 aa6.59□□□□□ -1.35
ATXN3-245ENST00000556958 TMEFF1Q8IYR6 380 aa6.59□□□□□ -1.35
ATXN3-245ENST00000556958 ADGRF4Q8IZF3 695 aa6.59□□□□□ -1.35
ATXN3-245ENST00000556958 PRR7Q8TB68 274 aa6.59□□□□□ -1.35
ATXN3-245ENST00000556958 HNRNPLLQ8WVV9 542 aaKnown RBP6.59□□□□□ -1.35
ATXN3-245ENST00000556958 LRIG1Q96JA1 1093 aa6.59□□□□□ -1.35
ATXN3-245ENST00000556958 CDHR1Q96JP9 859 aa6.59□□□□□ -1.35
ATXN3-245ENST00000556958 EDEM2Q9BV94 578 aa6.59□□□□□ -1.35
ATXN3-245ENST00000556958 PHF20Q9BVI0 1012 aa6.59□□□□□ -1.35
ATXN3-245ENST00000556958 AMNQ9BXJ7 453 aa6.59□□□□□ -1.35
ATXN3-245ENST00000556958 TOMM22Q9NS69 142 aa6.59□□□□□ -1.35
ATXN3-245ENST00000556958 NDRG2Q9UN36 371 aaKnown RBP6.59□□□□□ -1.35
ATXN3-245ENST00000556958 WASF2Q9Y6W5 498 aa6.59□□□□□ -1.35
ATXN3-245ENST00000556958 NLRC5Q86WI3 1866 aa6.58□□□□□ -1.36
ATXN3-245ENST00000556958 NBEAQ8NFP9 2946 aa6.58□□□□□ -1.36
ATXN3-245ENST00000556958 A0A0U1RQF3 1178 aa6.58□□□□□ -1.36
ATXN3-245ENST00000556958 FAM221BA6H8Z2 402 aa6.58□□□□□ -1.36
ATXN3-245ENST00000556958 CFAP99D6REC4 459 aa6.58□□□□□ -1.36
ATXN3-245ENST00000556958 GAS2O43903 313 aaKnown RBP6.58□□□□□ -1.36
ATXN3-245ENST00000556958 PAPSS2O95340 614 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-245ENST00000556958 PAPLNO95428 1278 aa6.58□□□□□ -1.36
ATXN3-245ENST00000556958 ALDH2P05091 517 aa6.58□□□□□ -1.36
ATXN3-245ENST00000556958 URODP06132 367 aa6.58□□□□□ -1.36
ATXN3-245ENST00000556958 GALTP07902 379 aa6.58□□□□□ -1.36
ATXN3-245ENST00000556958 GOLGA8HP0CJ92 632 aa6.58□□□□□ -1.36
ATXN3-245ENST00000556958 TRIM27P14373 513 aa6.58□□□□□ -1.36
ATXN3-245ENST00000556958 HOXA13P31271 388 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-245ENST00000556958 MPLP40238 635 aa6.58□□□□□ -1.36
ATXN3-245ENST00000556958 RAP1GAPP47736 663 aa6.58□□□□□ -1.36
ATXN3-245ENST00000556958 AK2P54819 239 aa6.58□□□□□ -1.36
ATXN3-245ENST00000556958 FGD1P98174 961 aa6.58□□□□□ -1.36
ATXN3-245ENST00000556958 SATB1Q01826 763 aa6.58□□□□□ -1.36
ATXN3-245ENST00000556958 RNASELQ05823 741 aaKnown RBP6.58□□□□□ -1.36
ATXN3-245ENST00000556958 MCM6Q14566 821 aa6.58□□□□□ -1.36
ATXN3-245ENST00000556958 HEATR6Q6AI08 1181 aaKnown RBP6.58□□□□□ -1.36
ATXN3-245ENST00000556958 RETREG3Q86VR2 466 aa6.58□□□□□ -1.36
ATXN3-245ENST00000556958 WDR5BQ86VZ2 330 aa6.58□□□□□ -1.36
ATXN3-245ENST00000556958 FCHSD1Q86WN1 690 aa6.58□□□□□ -1.36
ATXN3-245ENST00000556958 LSM14AQ8ND56 463 aaKnown RBP6.58□□□□□ -1.36
ATXN3-245ENST00000556958 ST13P5Q8NFI4 369 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-245ENST00000556958 IL31RAQ8NI17 732 aa6.58□□□□□ -1.36
ATXN3-245ENST00000556958 HELQQ8TDG4 1101 aa6.58□□□□□ -1.36
ATXN3-245ENST00000556958 FRAT1Q92837 279 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-245ENST00000556958 ZNF707Q96C28 371 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-245ENST00000556958 PSMG3-AS1Q96PY0 264 aa6.58□□□□□ -1.36
ATXN3-245ENST00000556958 BCL11AQ9H165 835 aa6.58□□□□□ -1.36
ATXN3-245ENST00000556958 CCDC86Q9H6F5 360 aaKnown RBP6.58□□□□□ -1.36
ATXN3-245ENST00000556958 VAT1LQ9HCJ6 419 aa6.58□□□□□ -1.36
ATXN3-245ENST00000556958 HEBP1Q9NRV9 189 aa6.58□□□□□ -1.36
ATXN3-245ENST00000556958 RNF19AQ9NV58 838 aa6.58□□□□□ -1.36
ATXN3-245ENST00000556958 RTEL1Q9NZ71 1219 aa6.58□□□□□ -1.36
ATXN3-245ENST00000556958 ZNF462Q96JM2 2506 aa6.58□□□□□ -1.36
ATXN3-245ENST00000556958 ITPR1Q14643 2758 aa6.58□□□□□ -1.36
ATXN3-245ENST00000556958 HECTD1Q9ULT8 2610 aa6.58□□□□□ -1.36
ATXN3-245ENST00000556958 NAV1Q8NEY1 1877 aa6.58□□□□□ -1.36
ATXN3-245ENST00000556958 DMXL2Q8TDJ6 3036 aa6.57□□□□□ -1.36
ATXN3-245ENST00000556958 GSTTP1A0A1W2PQM5 241 aa6.57□□□□□ -1.36
ATXN3-245ENST00000556958 RAB11FIP3O75154 756 aa6.57□□□□□ -1.36
ATXN3-245ENST00000556958 ECI2O75521 394 aa6.57□□□□□ -1.36
ATXN3-245ENST00000556958 RFPL2O75678 378 aa6.57□□□□□ -1.36
ATXN3-245ENST00000556958 SSBP05455 408 aaKnown RBP eCLIP6.57□□□□□ -1.36
ATXN3-245ENST00000556958 KLRC1P26715 233 aa6.57□□□□□ -1.36
ATXN3-245ENST00000556958 CTDSPL2Q05D32 466 aa6.57□□□□□ -1.36
ATXN3-245ENST00000556958 PLCB4Q15147 1175 aa6.57□□□□□ -1.36
ATXN3-245ENST00000556958 RRP12Q5JTH9 1297 aaKnown RBP6.57□□□□□ -1.36
ATXN3-245ENST00000556958 CLLU1OSQ5K130 101 aa6.57□□□□□ -1.36
ATXN3-245ENST00000556958 KIAA1211LQ6NV74 962 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms