RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 GRXCR1A8MXD5 290 aa5.67□□□□□ -1.5
PRPF39-210ENST00000556718 AKAP10O43572 662 aa5.67□□□□□ -1.5
PRPF39-210ENST00000556718 LMNAP02545 664 aaKnown RBP5.67□□□□□ -1.5
PRPF39-210ENST00000556718 CT47B1P0C2W7 299 aaPredicted RBP5.67□□□□□ -1.5
PRPF39-210ENST00000556718 GOLGA6DP0CG33 693 aa5.67□□□□□ -1.5
PRPF39-210ENST00000556718 ZBTB48P10074 688 aaPredicted RBP5.67□□□□□ -1.5
PRPF39-210ENST00000556718 ATP2A2P16615 1042 aaKnown RBP5.67□□□□□ -1.5
PRPF39-210ENST00000556718 RAB27AP51159 221 aa5.67□□□□□ -1.5
PRPF39-210ENST00000556718 MECP2P51608 486 aaKnown RBP5.67□□□□□ -1.5
PRPF39-210ENST00000556718 TBX4P57082 545 aa5.67□□□□□ -1.5
PRPF39-210ENST00000556718 SESN2P58004 480 aaPredicted RBP5.67□□□□□ -1.5
PRPF39-210ENST00000556718 PIN1Q13526 163 aaPredicted RBP5.67□□□□□ -1.5
PRPF39-210ENST00000556718 CCDC142Q17RM4 750 aa5.67□□□□□ -1.5
PRPF39-210ENST00000556718 FKBP15Q5T1M5 1219 aa5.67□□□□□ -1.5
PRPF39-210ENST00000556718 RAVER1Q8IY67 606 aaKnown RBP5.67□□□□□ -1.5
PRPF39-210ENST00000556718 MB21D1Q8N884 522 aa5.67□□□□□ -1.5
PRPF39-210ENST00000556718 OR5AN1Q8NGI8 311 aa5.67□□□□□ -1.5
PRPF39-210ENST00000556718 NTN5Q8WTR8 489 aaPredicted RBP5.67□□□□□ -1.5
PRPF39-210ENST00000556718 ATXN2LQ8WWM7 1075 aaKnown RBP5.67□□□□□ -1.5
PRPF39-210ENST00000556718 TSR2Q969E8 191 aaKnown RBP5.67□□□□□ -1.5
PRPF39-210ENST00000556718 GFM2Q969S9 779 aaKnown RBP5.67□□□□□ -1.5
PRPF39-210ENST00000556718 LENG9Q96B70 501 aa5.67□□□□□ -1.5
PRPF39-210ENST00000556718 AHCYL2Q96HN2 611 aaKnown RBP5.67□□□□□ -1.5
PRPF39-210ENST00000556718 PSMD1Q99460 953 aa5.67□□□□□ -1.5
PRPF39-210ENST00000556718 FOXB1Q99853 325 aa5.67□□□□□ -1.5
PRPF39-210ENST00000556718 SPTLC3Q9NUV7 552 aa5.67□□□□□ -1.5
PRPF39-210ENST00000556718 GOLGA6AQ9NYA3 693 aa5.67□□□□□ -1.5
PRPF39-210ENST00000556718 HIP1RO75146 1068 aa5.66□□□□□ -1.5
PRPF39-210ENST00000556718 KRT37O76014 449 aa5.66□□□□□ -1.5
PRPF39-210ENST00000556718 PRKD3O94806 890 aa5.66□□□□□ -1.5
PRPF39-210ENST00000556718 SNUPNO95149 360 aaKnown RBP5.66□□□□□ -1.5
PRPF39-210ENST00000556718 SCGB1D2O95969 90 aa5.66□□□□□ -1.5
PRPF39-210ENST00000556718 U2AF1L5P0DN76 240 aaPredicted RBP5.66□□□□□ -1.5
PRPF39-210ENST00000556718 ATF3P18847 181 aa5.66□□□□□ -1.5
PRPF39-210ENST00000556718 SMAD3P84022 425 aaKnown RBP5.66□□□□□ -1.5
PRPF39-210ENST00000556718 IRF9Q00978 393 aa5.66□□□□□ -1.5
PRPF39-210ENST00000556718 U2AF1Q01081 240 aaKnown RBP eCLIP5.66□□□□□ -1.5
PRPF39-210ENST00000556718 DDB1Q16531 1140 aa5.66□□□□□ -1.5
PRPF39-210ENST00000556718 PTPN21Q16825 1174 aa5.66□□□□□ -1.5
PRPF39-210ENST00000556718 HTR3DQ70Z44 454 aa5.66□□□□□ -1.5
PRPF39-210ENST00000556718 MYO1HQ8N1T3 1032 aa5.66□□□□□ -1.5
PRPF39-210ENST00000556718 EFHBQ8N7U6 833 aa5.66□□□□□ -1.5
PRPF39-210ENST00000556718 SLC5A5Q92911 643 aa5.66□□□□□ -1.5
PRPF39-210ENST00000556718 HOOK2Q96ED9 719 aa5.66□□□□□ -1.5
PRPF39-210ENST00000556718 CAMKK2Q96RR4 588 aa5.66□□□□□ -1.5
PRPF39-210ENST00000556718 BOCQ9BWV1 1114 aa5.66□□□□□ -1.5
PRPF39-210ENST00000556718 PCIF1Q9H4Z3 704 aa5.66□□□□□ -1.5
PRPF39-210ENST00000556718 GABBR1Q9UBS5 961 aa5.66□□□□□ -1.5
PRPF39-210ENST00000556718 ZNF180Q9UJW8 692 aa5.66□□□□□ -1.5
PRPF39-210ENST00000556718 GRID2IPA4D2P6 1211 aa5.65□□□□□ -1.5
PRPF39-210ENST00000556718 GABRDO14764 452 aa5.65□□□□□ -1.5
PRPF39-210ENST00000556718 PLIN1O60240 522 aa5.65□□□□□ -1.5
PRPF39-210ENST00000556718 CAND2O75155 1236 aa5.65□□□□□ -1.5
PRPF39-210ENST00000556718 CFBP00751 764 aa5.65□□□□□ -1.5
PRPF39-210ENST00000556718 PRLP01236 227 aa5.65□□□□□ -1.5
PRPF39-210ENST00000556718 MYBL2P10244 700 aa5.65□□□□□ -1.5
PRPF39-210ENST00000556718 SLC6A3Q01959 620 aa5.65□□□□□ -1.5
PRPF39-210ENST00000556718 HLTFQ14527 1009 aaKnown RBP eCLIP5.65□□□□□ -1.5
PRPF39-210ENST00000556718 CCSAPQ6IQ19 270 aaPredicted RBP5.65□□□□□ -1.5
PRPF39-210ENST00000556718 OXSMQ9NWU1 459 aa5.65□□□□□ -1.5
PRPF39-210ENST00000556718 K7ESF4 209 aa5.64□□□□□ -1.51
PRPF39-210ENST00000556718 STC2O76061 302 aa5.64□□□□□ -1.51
PRPF39-210ENST00000556718 TOX4O94842 621 aa5.64□□□□□ -1.51
PRPF39-210ENST00000556718 ZFP36P26651 326 aaKnown RBP5.64□□□□□ -1.51
PRPF39-210ENST00000556718 LSP1P33241 339 aa5.64□□□□□ -1.51
PRPF39-210ENST00000556718 PTTG1IPP53801 180 aa5.64□□□□□ -1.51
PRPF39-210ENST00000556718 KLF1Q13351 362 aaPredicted RBP5.64□□□□□ -1.51
PRPF39-210ENST00000556718 DGKDQ16760 1214 aa5.64□□□□□ -1.51
PRPF39-210ENST00000556718 OTOP1Q7RTM1 612 aa5.64□□□□□ -1.51
PRPF39-210ENST00000556718 CLEC14AQ86T13 490 aa5.64□□□□□ -1.51
PRPF39-210ENST00000556718 AMOTL1Q8IY63 956 aa5.64□□□□□ -1.51
PRPF39-210ENST00000556718 PLA2G15Q8NCC3 412 aa5.64□□□□□ -1.51
PRPF39-210ENST00000556718 PROKR1Q8TCW9 393 aa5.64□□□□□ -1.51
PRPF39-210ENST00000556718 ZNF764Q96H86 408 aaPredicted RBP5.64□□□□□ -1.51
PRPF39-210ENST00000556718 ZNF512Q96ME7 567 aaPredicted RBP5.64□□□□□ -1.51
PRPF39-210ENST00000556718 CDH19Q9H159 772 aa5.64□□□□□ -1.51
PRPF39-210ENST00000556718 WDR26Q9H7D7 661 aa5.64□□□□□ -1.51
PRPF39-210ENST00000556718 ZNHIT2Q9UHR6 403 aa5.64□□□□□ -1.51
PRPF39-210ENST00000556718 RCAN3Q9UKA8 241 aa5.64□□□□□ -1.51
PRPF39-210ENST00000556718 FZD1Q9UP38 647 aa5.64□□□□□ -1.51
PRPF39-210ENST00000556718 MRFAP1Q9Y605 127 aa5.64□□□□□ -1.51
PRPF39-210ENST00000556718 MAP4K4O95819 1239 aaPredicted RBP5.63□□□□□ -1.51
PRPF39-210ENST00000556718 KRT18P05783 430 aaKnown RBP5.63□□□□□ -1.51
PRPF39-210ENST00000556718 VSIG10L2P0DP72 767 aa5.63□□□□□ -1.51
PRPF39-210ENST00000556718 MRPS21P82921 87 aaKnown RBP5.63□□□□□ -1.51
PRPF39-210ENST00000556718 LRRC41Q15345 812 aa5.63□□□□□ -1.51
PRPF39-210ENST00000556718 ABCB5Q2M3G0 1257 aa5.63□□□□□ -1.51
PRPF39-210ENST00000556718 GAGE13Q4V321 117 aa5.63□□□□□ -1.51
PRPF39-210ENST00000556718 BROXQ5VW32 411 aa5.63□□□□□ -1.51
PRPF39-210ENST00000556718 CC2D1AQ6P1N0 951 aaPredicted RBP5.63□□□□□ -1.51
PRPF39-210ENST00000556718 PNMA8AQ86V59 439 aaPredicted RBP5.63□□□□□ -1.51
PRPF39-210ENST00000556718 CXorf67Q86X51 503 aaPredicted RBP5.63□□□□□ -1.51
PRPF39-210ENST00000556718 PRIMA1Q86XR5 153 aa5.63□□□□□ -1.51
PRPF39-210ENST00000556718 MDGA1Q8NFP4 955 aa5.63□□□□□ -1.51
PRPF39-210ENST00000556718 DNAI1Q9UI46 699 aa5.63□□□□□ -1.51
PRPF39-210ENST00000556718 PACSIN3Q9UKS6 424 aa5.63□□□□□ -1.51
PRPF39-210ENST00000556718 LUC7L2Q9Y383 392 aaKnown RBP5.63□□□□□ -1.51
PRPF39-210ENST00000556718 NOC2LQ9Y3T9 749 aaKnown RBP5.63□□□□□ -1.51
PRPF39-210ENST00000556718 SPO11Q9Y5K1 396 aa5.63□□□□□ -1.51
PRPF39-210ENST00000556718 HS3ST4Q9Y661 456 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms