RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 NPHP1O15259 732 aa6.1□□□□□ -1.43
SRP54-211ENST00000556445 AKAP10O43572 662 aa6.1□□□□□ -1.43
SRP54-211ENST00000556445 TIMM44O43615 452 aa6.1□□□□□ -1.43
SRP54-211ENST00000556445 ZNF28P17035 718 aa6.1□□□□□ -1.43
SRP54-211ENST00000556445 EPHA5P54756 1037 aa6.1□□□□□ -1.43
SRP54-211ENST00000556445 GJA9P57773 515 aa6.1□□□□□ -1.43
SRP54-211ENST00000556445 TEFQ10587 303 aa6.1□□□□□ -1.43
SRP54-211ENST00000556445 PAK1Q13153 545 aa6.1□□□□□ -1.43
SRP54-211ENST00000556445 DCTN1Q14203 1278 aa6.1□□□□□ -1.43
SRP54-211ENST00000556445 ZC3H12BQ5HYM0 836 aaKnown RBP6.1□□□□□ -1.43
SRP54-211ENST00000556445 FAM26FQ5R3K3 315 aa6.1□□□□□ -1.43
SRP54-211ENST00000556445 ICE2Q659A1 982 aa6.1□□□□□ -1.43
SRP54-211ENST00000556445 CCDC174Q6PII3 467 aa6.1□□□□□ -1.43
SRP54-211ENST00000556445 TMC5Q6UXY8 1006 aa6.1□□□□□ -1.43
SRP54-211ENST00000556445 SDR16C5Q8N3Y7 309 aa6.1□□□□□ -1.43
SRP54-211ENST00000556445 TMEM57Q8N5G2 664 aa6.1□□□□□ -1.43
SRP54-211ENST00000556445 PDILTQ8N807 584 aa6.1□□□□□ -1.43
SRP54-211ENST00000556445 TSPYL6Q8N831 410 aa6.1□□□□□ -1.43
SRP54-211ENST00000556445 C8orf58Q8NAV2 365 aa6.1□□□□□ -1.43
SRP54-211ENST00000556445 C1orf131Q8NDD1 294 aaKnown RBP6.1□□□□□ -1.43
SRP54-211ENST00000556445 MYRIPQ8NFW9 859 aa6.1□□□□□ -1.43
SRP54-211ENST00000556445 MFSD3Q96ES6 412 aa6.1□□□□□ -1.43
SRP54-211ENST00000556445 ZSWIM3Q96MP5 696 aa6.1□□□□□ -1.43
SRP54-211ENST00000556445 IPO9Q96P70 1041 aaKnown RBP6.1□□□□□ -1.43
SRP54-211ENST00000556445 TMEM209Q96SK2 561 aa6.1□□□□□ -1.43
SRP54-211ENST00000556445 ASPSCR1Q9BZE9 553 aa6.1□□□□□ -1.43
SRP54-211ENST00000556445 PPCSQ9HAB8 311 aa6.1□□□□□ -1.43
SRP54-211ENST00000556445 PTPRHQ9HD43 1115 aa6.1□□□□□ -1.43
SRP54-211ENST00000556445 ZBTB40Q9NUA8 1239 aa6.1□□□□□ -1.43
SRP54-211ENST00000556445 USP40Q9NVE5 1235 aa6.1□□□□□ -1.43
SRP54-211ENST00000556445 TAGLN3Q9UI15 199 aa6.1□□□□□ -1.43
SRP54-211ENST00000556445 DSEQ9UL01 958 aa6.1□□□□□ -1.43
SRP54-211ENST00000556445 PCDHA8Q9Y5H6 950 aa6.1□□□□□ -1.43
SRP54-211ENST00000556445 DUSP10Q9Y6W6 482 aa6.1□□□□□ -1.43
SRP54-211ENST00000556445 CEMIPQ8WUJ3 1361 aa6.09□□□□□ -1.43
SRP54-211ENST00000556445 XIRP1Q702N8 1843 aaKnown RBP6.09□□□□□ -1.43
SRP54-211ENST00000556445 B8ZZF3 427 aa6.09□□□□□ -1.43
SRP54-211ENST00000556445 ELL2O00472 640 aaPredicted RBP6.09□□□□□ -1.43
SRP54-211ENST00000556445 DDX3XO00571 662 aaKnown RBP eCLIP6.09□□□□□ -1.43
SRP54-211ENST00000556445 PRRG2O14669 202 aa6.09□□□□□ -1.43
SRP54-211ENST00000556445 LDHCP07864 332 aa6.09□□□□□ -1.43
SRP54-211ENST00000556445 HSP90AB1P08238 724 aaKnown RBP6.09□□□□□ -1.43
SRP54-211ENST00000556445 MYCLP1P12525 358 aaPredicted RBP6.09□□□□□ -1.43
SRP54-211ENST00000556445 FAHP16930 419 aa6.09□□□□□ -1.43
SRP54-211ENST00000556445 SOX5P35711 763 aa6.09□□□□□ -1.43
SRP54-211ENST00000556445 TRAPPC10P48553 1259 aa6.09□□□□□ -1.43
SRP54-211ENST00000556445 CCT4P50991 539 aaKnown RBP6.09□□□□□ -1.43
SRP54-211ENST00000556445 NEK2P51955 445 aa6.09□□□□□ -1.43
SRP54-211ENST00000556445 PAN2Q504Q3 1202 aaKnown RBP6.09□□□□□ -1.43
SRP54-211ENST00000556445 ZNF530Q6P9A1 599 aaPredicted RBP6.09□□□□□ -1.43
SRP54-211ENST00000556445 SLC4A10Q6U841 1118 aa6.09□□□□□ -1.43
SRP54-211ENST00000556445 RINLQ6ZS11 566 aa6.09□□□□□ -1.43
SRP54-211ENST00000556445 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.09□□□□□ -1.43
SRP54-211ENST00000556445 MTDHQ86UE4 582 aaKnown RBP6.09□□□□□ -1.43
SRP54-211ENST00000556445 SPICE1Q8N0Z3 855 aa6.09□□□□□ -1.43
SRP54-211ENST00000556445 RAPGEF4Q8WZA2 1011 aa6.09□□□□□ -1.43
SRP54-211ENST00000556445 NINJ1Q92982 152 aa6.09□□□□□ -1.43
SRP54-211ENST00000556445 GCC1Q96CN9 775 aa6.09□□□□□ -1.43
SRP54-211ENST00000556445 NEUROD6Q96NK8 337 aa6.09□□□□□ -1.43
SRP54-211ENST00000556445 CLIC6Q96NY7 704 aa6.09□□□□□ -1.43
SRP54-211ENST00000556445 CD244Q9BZW8 370 aa6.09□□□□□ -1.43
SRP54-211ENST00000556445 CDH19Q9H159 772 aa6.09□□□□□ -1.43
SRP54-211ENST00000556445 PCDHA9Q9Y5H5 950 aa6.09□□□□□ -1.43
SRP54-211ENST00000556445 LMO7Q8WWI1 1683 aa6.09□□□□□ -1.43
SRP54-211ENST00000556445 PXDNQ92626 1479 aa6.09□□□□□ -1.44
SRP54-211ENST00000556445 IGHDP01880 384 aa6.08□□□□□ -1.44
SRP54-211ENST00000556445 SYN1P17600 705 aa6.08□□□□□ -1.44
SRP54-211ENST00000556445 GUCY2FP51841 1108 aa6.08□□□□□ -1.44
SRP54-211ENST00000556445 MLLT6P55198 1093 aaPredicted RBP6.08□□□□□ -1.44
SRP54-211ENST00000556445 GUCY1A3Q02108 690 aa6.08□□□□□ -1.44
SRP54-211ENST00000556445 SIM2Q14190 667 aaPredicted RBP6.08□□□□□ -1.44
SRP54-211ENST00000556445 C21orf62-AS1Q17RA5 79 aa6.08□□□□□ -1.44
SRP54-211ENST00000556445 NXNQ6DKJ4 435 aa6.08□□□□□ -1.44
SRP54-211ENST00000556445 ERAP2Q6P179 960 aa6.08□□□□□ -1.44
SRP54-211ENST00000556445 KCTD1Q719H9 257 aa6.08□□□□□ -1.44
SRP54-211ENST00000556445 BRINP3Q76B58 766 aa6.08□□□□□ -1.44
SRP54-211ENST00000556445 RNF180Q86T96 592 aa6.08□□□□□ -1.44
SRP54-211ENST00000556445 NIM1KQ8IY84 436 aa6.08□□□□□ -1.44
SRP54-211ENST00000556445 TCEAL8Q8IYN2 117 aa6.08□□□□□ -1.44
SRP54-211ENST00000556445 DTX3Q8N9I9 347 aa6.08□□□□□ -1.44
SRP54-211ENST00000556445 TEX19Q8NA77 164 aa6.08□□□□□ -1.44
SRP54-211ENST00000556445 TXNDC5Q8NBS9 432 aaKnown RBP6.08□□□□□ -1.44
SRP54-211ENST00000556445 GSTCDQ8NEC7 633 aa6.08□□□□□ -1.44
SRP54-211ENST00000556445 IL17REQ8NFR9 667 aa6.08□□□□□ -1.44
SRP54-211ENST00000556445 ZCCHC14Q8WYQ9 949 aaKnown RBP6.08□□□□□ -1.44
SRP54-211ENST00000556445 FBXW5Q969U6 566 aa6.08□□□□□ -1.44
SRP54-211ENST00000556445 KRTAP4-9Q9BYQ8 210 aa6.08□□□□□ -1.44
SRP54-211ENST00000556445 SLC52A2Q9HAB3 445 aa6.08□□□□□ -1.44
SRP54-211ENST00000556445 HDAC5Q9UQL6 1122 aa6.08□□□□□ -1.44
SRP54-211ENST00000556445 NUB1Q9Y5A7 615 aa6.08□□□□□ -1.44
SRP54-211ENST00000556445 PPP2R3BQ9Y5P8 575 aa6.08□□□□□ -1.44
SRP54-211ENST00000556445 ACOT7O00154 380 aa6.07□□□□□ -1.44
SRP54-211ENST00000556445 RNMTO43148 476 aaKnown RBP6.07□□□□□ -1.44
SRP54-211ENST00000556445 HMMRO75330 724 aa6.07□□□□□ -1.44
SRP54-211ENST00000556445 CRTAMO95727 393 aa6.07□□□□□ -1.44
SRP54-211ENST00000556445 AMY2AP04746 511 aa6.07□□□□□ -1.44
SRP54-211ENST00000556445 AMY2BP19961 511 aa6.07□□□□□ -1.44
SRP54-211ENST00000556445 RGS3P49796 1198 aa6.07□□□□□ -1.44
SRP54-211ENST00000556445 KCTD2Q14681 263 aa6.07□□□□□ -1.44
SRP54-211ENST00000556445 GPR19Q15760 415 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms