RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 ZWILCHQ9H900 591 aa16.03■□□□□ 0.16
ARHGEF40-207ENST00000556399 CHORDC1Q9UHD1 332 aaPredicted RBP16.03■□□□□ 0.16
ARHGEF40-207ENST00000556399 SIK3Q9Y2K2 1263 aa16.03■□□□□ 0.16
ARHGEF40-207ENST00000556399 KLRC4O43908 158 aa16.02■□□□□ 0.16
ARHGEF40-207ENST00000556399 CCND1P24385 295 aa16.02■□□□□ 0.16
ARHGEF40-207ENST00000556399 ARHGEF1Q92888 912 aaKnown RBP16.02■□□□□ 0.16
ARHGEF40-207ENST00000556399 C9orf72Q96LT7 481 aa16.02■□□□□ 0.16
ARHGEF40-207ENST00000556399 Q9H521 79 aa16.02■□□□□ 0.16
ARHGEF40-207ENST00000556399 RIC1Q4ADV7 1423 aa16.02■□□□□ 0.16
ARHGEF40-207ENST00000556399 CPP00450 1065 aa16.02■□□□□ 0.16
ARHGEF40-207ENST00000556399 PDE1BQ01064 536 aa16.02■□□□□ 0.16
ARHGEF40-207ENST00000556399 KYNUQ16719 465 aa16.02■□□□□ 0.16
ARHGEF40-207ENST00000556399 ZNF662Q6ZS27 426 aa16.02■□□□□ 0.16
ARHGEF40-207ENST00000556399 COL23A1Q86Y22 540 aaPredicted RBP16.02■□□□□ 0.16
ARHGEF40-207ENST00000556399 ARMC2Q8NEN0 867 aa16.02■□□□□ 0.16
ARHGEF40-207ENST00000556399 CFAP36Q96G28 342 aa16.02■□□□□ 0.16
ARHGEF40-207ENST00000556399 FOXP2O15409 715 aa16.02■□□□□ 0.16
ARHGEF40-207ENST00000556399 ATMINO43313 823 aaPredicted RBP16.02■□□□□ 0.16
ARHGEF40-207ENST00000556399 ITGA4P13612 1032 aa16.02■□□□□ 0.16
ARHGEF40-207ENST00000556399 VEGFAP15692 232 aaPredicted RBP16.02■□□□□ 0.16
ARHGEF40-207ENST00000556399 SCP2P22307 547 aa16.02■□□□□ 0.16
ARHGEF40-207ENST00000556399 ITPK1Q13572 414 aa16.02■□□□□ 0.16
ARHGEF40-207ENST00000556399 EPS8L3Q8TE67 593 aaKnown RBP16.02■□□□□ 0.16
ARHGEF40-207ENST00000556399 SCFD1Q8WVM8 642 aa16.02■□□□□ 0.16
ARHGEF40-207ENST00000556399 SLC7A3Q8WY07 619 aa16.02■□□□□ 0.16
ARHGEF40-207ENST00000556399 CYTH2Q99418 400 aa16.02■□□□□ 0.16
ARHGEF40-207ENST00000556399 IL17RBQ9NRM6 502 aa16.02■□□□□ 0.16
ARHGEF40-207ENST00000556399 ZNF844Q08AG5 666 aa16.02■□□□□ 0.15
ARHGEF40-207ENST00000556399 PDIA2Q13087 525 aaKnown RBP16.02■□□□□ 0.15
ARHGEF40-207ENST00000556399 MIIPQ5JXC2 388 aa16.02■□□□□ 0.15
ARHGEF40-207ENST00000556399 TMEM270Q6UE05 265 aa16.02■□□□□ 0.15
ARHGEF40-207ENST00000556399 FAM160B2Q86V87 743 aa16.02■□□□□ 0.15
ARHGEF40-207ENST00000556399 CDKL2Q92772 493 aa16.02■□□□□ 0.15
ARHGEF40-207ENST00000556399 C18orf8Q96DM3 657 aa16.02■□□□□ 0.15
ARHGEF40-207ENST00000556399 UVRAGQ9P2Y5 699 aa16.02■□□□□ 0.15
ARHGEF40-207ENST00000556399 P4HBP07237 508 aaKnown RBP16.01■□□□□ 0.15
ARHGEF40-207ENST00000556399 MTERF2Q49AM1 385 aa16.01■□□□□ 0.15
ARHGEF40-207ENST00000556399 FAM213AQ9BRX8 229 aa16.01■□□□□ 0.15
ARHGEF40-207ENST00000556399 TRABDQ9H4I3 376 aa16.01■□□□□ 0.15
ARHGEF40-207ENST00000556399 PPARGC1AQ9UBK2 798 aaKnown RBP16.01■□□□□ 0.15
ARHGEF40-207ENST00000556399 GEN1Q17RS7 908 aa16.01■□□□□ 0.15
ARHGEF40-207ENST00000556399 HAUS6Q7Z4H7 955 aa16.01■□□□□ 0.15
ARHGEF40-207ENST00000556399 FAM129AQ9BZQ8 928 aa16.01■□□□□ 0.15
ARHGEF40-207ENST00000556399 OSGEPQ9NPF4 335 aa16.01■□□□□ 0.15
ARHGEF40-207ENST00000556399 GINS2Q9Y248 185 aa16.01■□□□□ 0.15
ARHGEF40-207ENST00000556399 DENND3A2RUS2 1198 aa16.01■□□□□ 0.15
ARHGEF40-207ENST00000556399 TLR3O15455 904 aaKnown RBP16.01■□□□□ 0.15
ARHGEF40-207ENST00000556399 TOM1L1O75674 476 aa16.01■□□□□ 0.15
ARHGEF40-207ENST00000556399 ANKRD20A8PQ5CZ79 823 aa16.01■□□□□ 0.15
ARHGEF40-207ENST00000556399 SYDE1Q6ZW31 735 aaPredicted RBP16.01■□□□□ 0.15
ARHGEF40-207ENST00000556399 TTC16Q8NEE8 873 aa16.01■□□□□ 0.15
ARHGEF40-207ENST00000556399 FBXO25Q8TCJ0 367 aa16.01■□□□□ 0.15
ARHGEF40-207ENST00000556399 PNMA5Q96PV4 448 aa16.01■□□□□ 0.15
ARHGEF40-207ENST00000556399 VCX3AQ9NNX9 186 aa16.01■□□□□ 0.15
ARHGEF40-207ENST00000556399 AIPL1Q9NZN9 384 aa16.01■□□□□ 0.15
ARHGEF40-207ENST00000556399 CFAP69A5D8W1 941 aa16.01■□□□□ 0.15
ARHGEF40-207ENST00000556399 F8VZ95 297 aa16.01■□□□□ 0.15
ARHGEF40-207ENST00000556399 EPHB6O15197 1021 aa16.01■□□□□ 0.15
ARHGEF40-207ENST00000556399 MED24O75448 989 aa16.01■□□□□ 0.15
ARHGEF40-207ENST00000556399 NXNQ6DKJ4 435 aa16.01■□□□□ 0.15
ARHGEF40-207ENST00000556399 FBXL13Q8NEE6 735 aa16.01■□□□□ 0.15
ARHGEF40-207ENST00000556399 ERP27Q96DN0 273 aa16.01■□□□□ 0.15
ARHGEF40-207ENST00000556399 USH1CQ9Y6N9 552 aa16.01■□□□□ 0.15
ARHGEF40-207ENST00000556399 RICTORQ6R327 1708 aa16■□□□□ 0.15
ARHGEF40-207ENST00000556399 FSBPO95073 299 aa16■□□□□ 0.15
ARHGEF40-207ENST00000556399 COILP38432 576 aaPredicted RBP16■□□□□ 0.15
ARHGEF40-207ENST00000556399 CASP4P49662 377 aa16■□□□□ 0.15
ARHGEF40-207ENST00000556399 ARFIP2P53365 341 aa16■□□□□ 0.15
ARHGEF40-207ENST00000556399 ITIH4Q14624 930 aa16■□□□□ 0.15
ARHGEF40-207ENST00000556399 EPHA7Q15375 998 aa16■□□□□ 0.15
ARHGEF40-207ENST00000556399 ATG16L1Q676U5 607 aa16■□□□□ 0.15
ARHGEF40-207ENST00000556399 ERICH1Q86X53 443 aa16■□□□□ 0.15
ARHGEF40-207ENST00000556399 MKNK1Q9BUB5 465 aa16■□□□□ 0.15
ARHGEF40-207ENST00000556399 IFT122Q9HBG6 1241 aa16■□□□□ 0.15
ARHGEF40-207ENST00000556399 FAM208AQ9UK61 1670 aaKnown RBP16■□□□□ 0.15
ARHGEF40-207ENST00000556399 COPEO14579 308 aa16■□□□□ 0.15
ARHGEF40-207ENST00000556399 PPP4CP60510 307 aa16■□□□□ 0.15
ARHGEF40-207ENST00000556399 TMPRSS15P98073 1019 aa16■□□□□ 0.15
ARHGEF40-207ENST00000556399 TFAMQ00059 246 aaKnown RBP16■□□□□ 0.15
ARHGEF40-207ENST00000556399 MTMR1Q13613 665 aa16■□□□□ 0.15
ARHGEF40-207ENST00000556399 KLHL38Q2WGJ6 581 aa16■□□□□ 0.15
ARHGEF40-207ENST00000556399 INTS5Q6P9B9 1019 aaKnown RBP16■□□□□ 0.15
ARHGEF40-207ENST00000556399 CNPY4Q8N129 248 aa16■□□□□ 0.15
ARHGEF40-207ENST00000556399 NSMCE1Q8WV22 266 aa16■□□□□ 0.15
ARHGEF40-207ENST00000556399 ADAM33Q9BZ11 813 aa16■□□□□ 0.15
ARHGEF40-207ENST00000556399 MIS12Q9H081 205 aa16■□□□□ 0.15
ARHGEF40-207ENST00000556399 KDM4CQ9H3R0 1056 aa16■□□□□ 0.15
ARHGEF40-207ENST00000556399 NXF1Q9UBU9 619 aaKnown RBP16■□□□□ 0.15
ARHGEF40-207ENST00000556399 SIPA1L2Q9P2F8 1722 aaPredicted RBP16■□□□□ 0.15
ARHGEF40-207ENST00000556399 MYBL1P10243 752 aa16■□□□□ 0.15
ARHGEF40-207ENST00000556399 PSMA2P25787 234 aa16■□□□□ 0.15
ARHGEF40-207ENST00000556399 QARSP47897 775 aaKnown RBP16■□□□□ 0.15
ARHGEF40-207ENST00000556399 RBM15Q96T37 977 aaKnown RBP eCLIP16■□□□□ 0.152e-6■■■□□ 17.2
ARHGEF40-207ENST00000556399 CASQ2O14958 399 aaPredicted RBP16■□□□□ 0.15
ARHGEF40-207ENST00000556399 EIF3DO15371 548 aaKnown RBP eCLIP16■□□□□ 0.15
ARHGEF40-207ENST00000556399 YARSP54577 528 aaKnown RBP16■□□□□ 0.15
ARHGEF40-207ENST00000556399 NPEPPSP55786 919 aa16■□□□□ 0.15
ARHGEF40-207ENST00000556399 COPS2P61201 443 aa16■□□□□ 0.15
ARHGEF40-207ENST00000556399 ZNF394Q53GI3 561 aa16■□□□□ 0.15
ARHGEF40-207ENST00000556399 BLOC1S4Q9NUP1 217 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms