RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 TCHPQ9BT92 498 aa15.53■□□□□ 0.08
SNX6-206ENST00000556162 TARS2Q9BW92 718 aaKnown RBP15.53■□□□□ 0.08
SNX6-206ENST00000556162 STRA6Q9BX79 667 aa15.53■□□□□ 0.08
SNX6-206ENST00000556162 TRIM6Q9C030 488 aaPredicted RBP15.53■□□□□ 0.08
SNX6-206ENST00000556162 SLC39A2Q9NP94 309 aa15.53■□□□□ 0.08
SNX6-206ENST00000556162 FAM105AQ9NUU6 356 aa15.53■□□□□ 0.08
SNX6-206ENST00000556162 RMND1Q9NWS8 449 aa15.53■□□□□ 0.08
SNX6-206ENST00000556162 LRFN2Q9ULH4 789 aa15.53■□□□□ 0.08
SNX6-206ENST00000556162 EXOC7Q9UPT5 735 aa15.53■□□□□ 0.08
SNX6-206ENST00000556162 PCDHB7Q9Y5E2 793 aa15.53■□□□□ 0.08
SNX6-206ENST00000556162 PPP1R37O75864 691 aa15.52■□□□□ 0.08
SNX6-206ENST00000556162 RHOBTB3O94955 611 aa15.52■□□□□ 0.08
SNX6-206ENST00000556162 MBD3O95983 291 aa15.52■□□□□ 0.08
SNX6-206ENST00000556162 STAG3L1P0CL83 205 aa15.52■□□□□ 0.08
SNX6-206ENST00000556162 CASP5P51878 434 aa15.52■□□□□ 0.08
SNX6-206ENST00000556162 CAMK4Q16566 473 aa15.52■□□□□ 0.08
SNX6-206ENST00000556162 L1TD1Q5T7N2 865 aaKnown RBP15.52■□□□□ 0.08
SNX6-206ENST00000556162 APBB1IPQ7Z5R6 666 aaPredicted RBP15.52■□□□□ 0.08
SNX6-206ENST00000556162 GPT2Q8TD30 523 aa15.52■□□□□ 0.08
SNX6-206ENST00000556162 ACCSQ96QU6 501 aa15.52■□□□□ 0.08
SNX6-206ENST00000556162 ZBED2Q9BTP6 218 aa15.52■□□□□ 0.08
SNX6-206ENST00000556162 FGFBP2Q9BYJ0 223 aa15.52■□□□□ 0.08
SNX6-206ENST00000556162 PDZD7Q9H5P4 517 aa15.52■□□□□ 0.08
SNX6-206ENST00000556162 TNFSF13BQ9Y275 285 aa15.52■□□□□ 0.08
SNX6-206ENST00000556162 PCDHB2Q9Y5E7 798 aa15.52■□□□□ 0.08
SNX6-206ENST00000556162 PCDHA5Q9Y5H7 936 aa15.52■□□□□ 0.08
SNX6-206ENST00000556162 LAMA3Q16787 3333 aa15.52■□□□□ 0.08
SNX6-206ENST00000556162 HNRNPDLO14979 420 aaKnown RBP15.52■□□□□ 0.07
SNX6-206ENST00000556162 ZNF623O75123 536 aa15.52■□□□□ 0.07
SNX6-206ENST00000556162 TOM1L1O75674 476 aa15.52■□□□□ 0.07
SNX6-206ENST00000556162 PRPF6O94906 941 aaKnown RBP15.52■□□□□ 0.07
SNX6-206ENST00000556162 EOMESO95936 686 aa15.52■□□□□ 0.07
SNX6-206ENST00000556162 LIG4P49917 911 aa15.52■□□□□ 0.07
SNX6-206ENST00000556162 STK4Q13043 487 aa15.52■□□□□ 0.07
SNX6-206ENST00000556162 UBXN11Q5T124 520 aa15.52■□□□□ 0.07
SNX6-206ENST00000556162 ECHDC2Q86YB7 292 aa15.52■□□□□ 0.07
SNX6-206ENST00000556162 NPAS4Q8IUM7 802 aa15.52■□□□□ 0.07
SNX6-206ENST00000556162 SYCP3Q8IZU3 236 aa15.52■□□□□ 0.07
SNX6-206ENST00000556162 ERCC4Q92889 916 aaPredicted RBP15.52■□□□□ 0.07
SNX6-206ENST00000556162 EIF2AQ9BY44 585 aaKnown RBP15.52■□□□□ 0.07
SNX6-206ENST00000556162 ELAC1Q9H777 363 aaKnown RBP15.52■□□□□ 0.07
SNX6-206ENST00000556162 TMEM206Q9H813 350 aa15.52■□□□□ 0.07
SNX6-206ENST00000556162 TMEM161AQ9NX61 479 aa15.52■□□□□ 0.07
SNX6-206ENST00000556162 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.51■□□□□ 0.07
SNX6-206ENST00000556162 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.51■□□□□ 0.07
SNX6-206ENST00000556162 EIF3DO15371 548 aaKnown RBP eCLIP15.51■□□□□ 0.07
SNX6-206ENST00000556162 NPTXRO95502 500 aa15.51■□□□□ 0.07
SNX6-206ENST00000556162 FAM117BQ6P1L5 589 aa15.51■□□□□ 0.07
SNX6-206ENST00000556162 TMCO2Q7Z6W1 182 aaPredicted RBP15.51■□□□□ 0.07
SNX6-206ENST00000556162 HERC6Q8IVU3 1022 aa15.51■□□□□ 0.07
SNX6-206ENST00000556162 RNF169Q8NCN4 708 aa15.51■□□□□ 0.07
SNX6-206ENST00000556162 GLIS3Q8NEA6 775 aa15.51■□□□□ 0.07
SNX6-206ENST00000556162 SPATA20Q8TB22 786 aa15.51■□□□□ 0.07
SNX6-206ENST00000556162 ZNF507Q8TCN5 953 aa15.51■□□□□ 0.07
SNX6-206ENST00000556162 CLSTN2Q9H4D0 955 aa15.51■□□□□ 0.07
SNX6-206ENST00000556162 PTPRHQ9HD43 1115 aa15.51■□□□□ 0.07
SNX6-206ENST00000556162 CLDN3O15551 220 aa15.5■□□□□ 0.07
SNX6-206ENST00000556162 GJB5O95377 273 aa15.5■□□□□ 0.07
SNX6-206ENST00000556162 PIGRP01833 764 aa15.5■□□□□ 0.07
SNX6-206ENST00000556162 PTMSP20962 102 aa15.5■□□□□ 0.07
SNX6-206ENST00000556162 MATR3P43243 847 aaKnown RBP eCLIP15.5■□□□□ 0.07
SNX6-206ENST00000556162 KCNA1Q09470 495 aa15.5■□□□□ 0.07
SNX6-206ENST00000556162 DCAF4L1Q3SXM0 396 aa15.5■□□□□ 0.07
SNX6-206ENST00000556162 EEF1DP3Q658K8 133 aa15.5■□□□□ 0.07
SNX6-206ENST00000556162 MPZL3Q6UWV2 235 aa15.5■□□□□ 0.07
SNX6-206ENST00000556162 EPM2AIP1Q7L775 607 aaPredicted RBP15.5■□□□□ 0.07
SNX6-206ENST00000556162 HACE1Q8IYU2 909 aa15.5■□□□□ 0.07
SNX6-206ENST00000556162 PGBD4Q96DM1 585 aa15.5■□□□□ 0.07
SNX6-206ENST00000556162 MICAL3Q7RTP6 2002 aa15.5■□□□□ 0.07
SNX6-206ENST00000556162 KIF20AO95235 890 aa15.5■□□□□ 0.07
SNX6-206ENST00000556162 ZNF568Q3ZCX4 644 aa15.5■□□□□ 0.07
SNX6-206ENST00000556162 MRPL10Q7Z7H8 261 aaKnown RBP15.5■□□□□ 0.07
SNX6-206ENST00000556162 ZBTB33Q86T24 672 aa15.5■□□□□ 0.07
SNX6-206ENST00000556162 CRIPAKQ8N1N5 446 aa15.5■□□□□ 0.07
SNX6-206ENST00000556162 SCFD1Q8WVM8 642 aa15.5■□□□□ 0.07
SNX6-206ENST00000556162 ZBTB45Q96K62 511 aaPredicted RBP15.5■□□□□ 0.07
SNX6-206ENST00000556162 GTPBP4Q9BZE4 634 aaKnown RBP15.5■□□□□ 0.07
SNX6-206ENST00000556162 NUP62CLQ9H1M0 184 aa15.5■□□□□ 0.07
SNX6-206ENST00000556162 ANKFY1Q9P2R3 1169 aa15.5■□□□□ 0.07
SNX6-206ENST00000556162 IPPQ9Y573 584 aa15.5■□□□□ 0.07
SNX6-206ENST00000556162 UBE4BO95155 1302 aa15.49■□□□□ 0.07
SNX6-206ENST00000556162 GRXCR1A8MXD5 290 aa15.49■□□□□ 0.07
SNX6-206ENST00000556162 PROZP22891 400 aa15.49■□□□□ 0.07
SNX6-206ENST00000556162 TTC3P53804 2025 aa15.49■□□□□ 0.07
SNX6-206ENST00000556162 SLFN12LQ6IEE8 588 aa15.49■□□□□ 0.07
SNX6-206ENST00000556162 ZNF598Q86UK7 904 aaKnown RBP15.49■□□□□ 0.07
SNX6-206ENST00000556162 KIAA0895Q8NCT3 520 aa15.49■□□□□ 0.07
SNX6-206ENST00000556162 SMG8Q8ND04 991 aaKnown RBP15.49■□□□□ 0.07
SNX6-206ENST00000556162 RAD9AQ99638 391 aa15.49■□□□□ 0.07
SNX6-206ENST00000556162 KIAA1468Q9P260 1216 aa15.49■□□□□ 0.07
SNX6-206ENST00000556162 INSL6Q9Y581 213 aa15.49■□□□□ 0.07
SNX6-206ENST00000556162 ANKRD63C9JTQ0 380 aa15.48■□□□□ 0.07
SNX6-206ENST00000556162 HOXA2O43364 376 aa15.48■□□□□ 0.07
SNX6-206ENST00000556162 TLL1O43897 1013 aa15.48■□□□□ 0.07
SNX6-206ENST00000556162 MCF2P10911 925 aa15.48■□□□□ 0.07
SNX6-206ENST00000556162 ITGA4P13612 1032 aa15.48■□□□□ 0.07
SNX6-206ENST00000556162 ATF7P17544 494 aaPredicted RBP15.48■□□□□ 0.07
SNX6-206ENST00000556162 BMT2Q1RMZ1 405 aa15.48■□□□□ 0.07
SNX6-206ENST00000556162 LRIT3Q3SXY7 679 aa15.48■□□□□ 0.07
SNX6-206ENST00000556162 FAM109BQ6ICB4 259 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms