RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 IMPG1Q17R60 797 aa11.37□□□□□ -0.59
ACTN1-216ENST00000556083 TTC19Q6DKK2 380 aaPredicted RBP11.37□□□□□ -0.59
ACTN1-216ENST00000556083 FMR1NBQ8N0W7 255 aaPredicted RBP11.37□□□□□ -0.59
ACTN1-216ENST00000556083 RIBC1Q8N443 379 aaPredicted RBP11.37□□□□□ -0.59
ACTN1-216ENST00000556083 STX19Q8N4C7 294 aa11.37□□□□□ -0.59
ACTN1-216ENST00000556083 FAM49AQ9H0Q0 323 aaPredicted RBP11.37□□□□□ -0.59
ACTN1-216ENST00000556083 UTP6Q9NYH9 597 aaKnown RBP11.37□□□□□ -0.59
ACTN1-216ENST00000556083 INTUQ9ULD6 942 aa11.37□□□□□ -0.59
ACTN1-216ENST00000556083 IGKV5-2P06315 115 aa11.37□□□□□ -0.59
ACTN1-216ENST00000556083 CASP2P42575 452 aa11.37□□□□□ -0.59
ACTN1-216ENST00000556083 AARSP49588 968 aaKnown RBP eCLIP11.37□□□□□ -0.59
ACTN1-216ENST00000556083 HDAC4P56524 1084 aa11.37□□□□□ -0.59
ACTN1-216ENST00000556083 PRAMEP78395 509 aa11.37□□□□□ -0.59
ACTN1-216ENST00000556083 PIGHQ14442 188 aaPredicted RBP11.37□□□□□ -0.59
ACTN1-216ENST00000556083 SGSM1Q2NKQ1 1148 aa11.37□□□□□ -0.59
ACTN1-216ENST00000556083 TMEM270Q6UE05 265 aa11.37□□□□□ -0.59
ACTN1-216ENST00000556083 SEPT1Q8WYJ6 367 aa11.37□□□□□ -0.59
ACTN1-216ENST00000556083 MYCBPQ99417 103 aaPredicted RBP11.37□□□□□ -0.59
ACTN1-216ENST00000556083 JPH1Q9HDC5 661 aaPredicted RBP11.37□□□□□ -0.59
ACTN1-216ENST00000556083 ANKEF1Q9NU02 776 aa11.37□□□□□ -0.59
ACTN1-216ENST00000556083 RBAKQ9NYW8 714 aaPredicted RBP11.37□□□□□ -0.59
ACTN1-216ENST00000556083 ARHGEF40Q8TER5 1519 aa11.37□□□□□ -0.59
ACTN1-216ENST00000556083 KCNQ4P56696 695 aa11.36□□□□□ -0.59
ACTN1-216ENST00000556083 DYNLT1P63172 113 aa11.36□□□□□ -0.59
ACTN1-216ENST00000556083 TRMT10CQ7L0Y3 403 aaKnown RBP11.36□□□□□ -0.59
ACTN1-216ENST00000556083 SETD3Q86TU7 594 aaPredicted RBP11.36□□□□□ -0.59
ACTN1-216ENST00000556083 FAM9CQ8IZT9 166 aa11.36□□□□□ -0.59
ACTN1-216ENST00000556083 ATL2Q8NHH9 583 aa11.36□□□□□ -0.59
ACTN1-216ENST00000556083 CEP95Q96GE4 821 aa11.36□□□□□ -0.59
ACTN1-216ENST00000556083 FTOQ9C0B1 505 aaKnown RBP eCLIP11.36□□□□□ -0.59
ACTN1-216ENST00000556083 WWP1Q9H0M0 922 aa11.36□□□□□ -0.59
ACTN1-216ENST00000556083 SPATS2LQ9NUQ6 558 aaKnown RBP11.36□□□□□ -0.59
ACTN1-216ENST00000556083 SNX5Q9Y5X3 404 aa11.36□□□□□ -0.59
ACTN1-216ENST00000556083 RASA4BC9J798 803 aa11.36□□□□□ -0.59
ACTN1-216ENST00000556083 ENC1O14682 589 aa11.36□□□□□ -0.59
ACTN1-216ENST00000556083 RASA4O43374 803 aa11.36□□□□□ -0.59
ACTN1-216ENST00000556083 ARPP19P56211 112 aa11.36□□□□□ -0.59
ACTN1-216ENST00000556083 OCA2Q04671 838 aa11.36□□□□□ -0.59
ACTN1-216ENST00000556083 MEI1Q5TIA1 1274 aa11.36□□□□□ -0.59
ACTN1-216ENST00000556083 MOXD1Q6UVY6 613 aa11.36□□□□□ -0.59
ACTN1-216ENST00000556083 HAUS6Q7Z4H7 955 aa11.36□□□□□ -0.59
ACTN1-216ENST00000556083 POLR3FQ9H1D9 316 aaPredicted RBP11.36□□□□□ -0.59
ACTN1-216ENST00000556083 TAF1DQ9H5J8 278 aaPredicted RBP11.36□□□□□ -0.59
ACTN1-216ENST00000556083 KRT82Q9NSB4 513 aa11.36□□□□□ -0.59
ACTN1-216ENST00000556083 PRMT7Q9NVM4 692 aaPredicted RBP11.36□□□□□ -0.59
ACTN1-216ENST00000556083 GABBR1Q9UBS5 961 aa11.36□□□□□ -0.59
ACTN1-216ENST00000556083 NRBP1Q9UHY1 535 aa11.36□□□□□ -0.59
ACTN1-216ENST00000556083 CAPN11Q9UMQ6 739 aa11.36□□□□□ -0.59
ACTN1-216ENST00000556083 KIF28PB7ZC32 967 aa11.36□□□□□ -0.59
ACTN1-216ENST00000556083 E5RI56 91 aa11.36□□□□□ -0.59
ACTN1-216ENST00000556083 TNPO2O14787 897 aaKnown RBP11.36□□□□□ -0.59
ACTN1-216ENST00000556083 PLEKHA8P1O95397 391 aa11.36□□□□□ -0.59
ACTN1-216ENST00000556083 GH1P01241 217 aa11.36□□□□□ -0.59
ACTN1-216ENST00000556083 STAT5BP51692 787 aa11.36□□□□□ -0.59
ACTN1-216ENST00000556083 STYK1Q6J9G0 422 aa11.36□□□□□ -0.59
ACTN1-216ENST00000556083 SCFD2Q8WU76 684 aa11.36□□□□□ -0.59
ACTN1-216ENST00000556083 SYN2Q92777 582 aaPredicted RBP11.36□□□□□ -0.59
ACTN1-216ENST00000556083 SPATA33Q96N06 139 aa11.36□□□□□ -0.59
ACTN1-216ENST00000556083 LXNQ9BS40 222 aa11.36□□□□□ -0.59
ACTN1-216ENST00000556083 VIPAS39Q9H9C1 493 aa11.36□□□□□ -0.59
ACTN1-216ENST00000556083 KIAA1257Q9ULG3 409 aa11.36□□□□□ -0.59
ACTN1-216ENST00000556083 C21orf2O43822 256 aa11.36□□□□□ -0.59
ACTN1-216ENST00000556083 MAPK8IP2Q13387 824 aaPredicted RBP11.36□□□□□ -0.59
ACTN1-216ENST00000556083 ZNF235Q14590 738 aa11.36□□□□□ -0.59
ACTN1-216ENST00000556083 VPS72Q15906 364 aa11.36□□□□□ -0.59
ACTN1-216ENST00000556083 EPM2AIP1Q7L775 607 aaPredicted RBP11.36□□□□□ -0.59
ACTN1-216ENST00000556083 STKLD1Q8NE28 680 aa11.36□□□□□ -0.59
ACTN1-216ENST00000556083 CFAP36Q96G28 342 aa11.36□□□□□ -0.59
ACTN1-216ENST00000556083 DYDC2Q96IM9 177 aa11.36□□□□□ -0.59
ACTN1-216ENST00000556083 CYTH2Q99418 400 aa11.36□□□□□ -0.59
ACTN1-216ENST00000556083 C7orf25Q9BPX7 421 aa11.36□□□□□ -0.59
ACTN1-216ENST00000556083 STK33Q9BYT3 514 aa11.36□□□□□ -0.59
ACTN1-216ENST00000556083 IRAK4Q9NWZ3 460 aa11.36□□□□□ -0.59
ACTN1-216ENST00000556083 LIMA1Q9UHB6 759 aaKnown RBP11.36□□□□□ -0.59
ACTN1-216ENST00000556083 ADGRB3O60242 1522 aa11.36□□□□□ -0.59
ACTN1-216ENST00000556083 ARHGAP10A1A4S6 786 aa11.35□□□□□ -0.59
ACTN1-216ENST00000556083 SOWAHDA6NJG2 315 aa11.35□□□□□ -0.59
ACTN1-216ENST00000556083 M0QYV0 167 aa11.35□□□□□ -0.59
ACTN1-216ENST00000556083 SLC2A3P11169 496 aa11.35□□□□□ -0.59
ACTN1-216ENST00000556083 NCF2P19878 526 aaPredicted RBP11.35□□□□□ -0.59
ACTN1-216ENST00000556083 HOXA13P31271 388 aaPredicted RBP11.35□□□□□ -0.59
ACTN1-216ENST00000556083 SNAPC2Q13487 334 aa11.35□□□□□ -0.59
ACTN1-216ENST00000556083 KIF19Q2TAC6 998 aa11.35□□□□□ -0.59
ACTN1-216ENST00000556083 PPP6R3Q5H9R7 873 aaPredicted RBP11.35□□□□□ -0.59
ACTN1-216ENST00000556083 NUGGCQ68CJ6 796 aa11.35□□□□□ -0.59
ACTN1-216ENST00000556083 CC2D1AQ6P1N0 951 aaPredicted RBP11.35□□□□□ -0.59
ACTN1-216ENST00000556083 ANO5Q75V66 913 aa11.35□□□□□ -0.59
ACTN1-216ENST00000556083 C17orf53Q8N3J3 647 aaPredicted RBP11.35□□□□□ -0.59
ACTN1-216ENST00000556083 ACRBPQ8NEB7 543 aa11.35□□□□□ -0.59
ACTN1-216ENST00000556083 FAM151AQ8WW52 585 aa11.35□□□□□ -0.59
ACTN1-216ENST00000556083 CEP19Q96LK0 163 aa11.35□□□□□ -0.59
ACTN1-216ENST00000556083 NDEL1Q9GZM8 345 aa11.35□□□□□ -0.59
ACTN1-216ENST00000556083 NEMP1O14524 444 aa11.35□□□□□ -0.59
ACTN1-216ENST00000556083 MCF2P10911 925 aa11.35□□□□□ -0.59
ACTN1-216ENST00000556083 LIG3P49916 1009 aa11.35□□□□□ -0.59
ACTN1-216ENST00000556083 PMS2P54278 862 aa11.35□□□□□ -0.59
ACTN1-216ENST00000556083 TOB2Q14106 344 aaPredicted RBP11.35□□□□□ -0.59
ACTN1-216ENST00000556083 LRRC8BQ6P9F7 803 aa11.35□□□□□ -0.59
ACTN1-216ENST00000556083 CCNJLQ8IV13 435 aa11.35□□□□□ -0.59
ACTN1-216ENST00000556083 TJP2Q9UDY2 1190 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms