RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 FAN1Q9Y2M0 1017 aa16.04■□□□□ 0.16
CHMP4BP1-201ENST00000556017 HES2Q9Y543 173 aa16.04■□□□□ 0.16
CHMP4BP1-201ENST00000556017 PPME1Q9Y570 386 aa16.04■□□□□ 0.16
CHMP4BP1-201ENST00000556017 IPPQ9Y573 584 aa16.04■□□□□ 0.16
CHMP4BP1-201ENST00000556017 DMXL1Q9Y485 3027 aa16.03■□□□□ 0.16
CHMP4BP1-201ENST00000556017 TEX28O15482 410 aa16.03■□□□□ 0.16
CHMP4BP1-201ENST00000556017 SLITRK3O94933 977 aa16.03■□□□□ 0.16
CHMP4BP1-201ENST00000556017 ALDH2P05091 517 aa16.03■□□□□ 0.16
CHMP4BP1-201ENST00000556017 FDPSP14324 419 aaKnown RBP16.03■□□□□ 0.16
CHMP4BP1-201ENST00000556017 GCFC2P16383 781 aaKnown RBP16.03■□□□□ 0.16
CHMP4BP1-201ENST00000556017 KLRC2P26717 231 aa16.03■□□□□ 0.16
CHMP4BP1-201ENST00000556017 RFC5P40937 340 aa16.03■□□□□ 0.16
CHMP4BP1-201ENST00000556017 CLCN5P51795 746 aa16.03■□□□□ 0.16
CHMP4BP1-201ENST00000556017 CTTNQ14247 550 aaKnown RBP16.03■□□□□ 0.16
CHMP4BP1-201ENST00000556017 BMS1Q14692 1282 aaKnown RBP16.03■□□□□ 0.16
CHMP4BP1-201ENST00000556017 C15orf39Q6ZRI6 1047 aa16.03■□□□□ 0.16
CHMP4BP1-201ENST00000556017 PIK3AP1Q6ZUJ8 805 aa16.03■□□□□ 0.16
CHMP4BP1-201ENST00000556017 PPFIBP1Q86W92 1011 aa16.03■□□□□ 0.16
CHMP4BP1-201ENST00000556017 URGCPQ8TCY9 931 aa16.03■□□□□ 0.16
CHMP4BP1-201ENST00000556017 CPB2Q96IY4 423 aa16.03■□□□□ 0.16
CHMP4BP1-201ENST00000556017 ZFP42Q96MM3 310 aa16.03■□□□□ 0.16
CHMP4BP1-201ENST00000556017 RPS6KC1Q96S38 1066 aa16.03■□□□□ 0.16
CHMP4BP1-201ENST00000556017 HSD17B14Q9BPX1 270 aa16.03■□□□□ 0.16
CHMP4BP1-201ENST00000556017 HERC2P3Q9BVR0 1158 aa16.03■□□□□ 0.16
CHMP4BP1-201ENST00000556017 KCNK12Q9HB15 430 aa16.03■□□□□ 0.16
CHMP4BP1-201ENST00000556017 RXFP1Q9HBX9 757 aa16.03■□□□□ 0.16
CHMP4BP1-201ENST00000556017 CHST7Q9NS84 486 aa16.03■□□□□ 0.16
CHMP4BP1-201ENST00000556017 TPCN1Q9ULQ1 816 aa16.03■□□□□ 0.16
CHMP4BP1-201ENST00000556017 DNAH14Q0VDD8 3507 aa16.02■□□□□ 0.16
CHMP4BP1-201ENST00000556017 VWA8A3KMH1 1905 aa16.02■□□□□ 0.16
CHMP4BP1-201ENST00000556017 PRR23AA6NEV1 266 aa16.02■□□□□ 0.16
CHMP4BP1-201ENST00000556017 ARL5CA6NH57 179 aa16.02■□□□□ 0.16
CHMP4BP1-201ENST00000556017 NARSO43776 548 aaKnown RBP16.02■□□□□ 0.16
CHMP4BP1-201ENST00000556017 CCNT1O60563 726 aaKnown RBP16.02■□□□□ 0.16
CHMP4BP1-201ENST00000556017 PFKFB2O60825 505 aa16.02■□□□□ 0.16
CHMP4BP1-201ENST00000556017 CYP4A11Q02928 519 aa16.02■□□□□ 0.16
CHMP4BP1-201ENST00000556017 MBTD1Q05BQ5 628 aa16.02■□□□□ 0.16
CHMP4BP1-201ENST00000556017 NR5A1Q13285 461 aa16.02■□□□□ 0.16
CHMP4BP1-201ENST00000556017 CMASQ8NFW8 434 aaPredicted RBP16.02■□□□□ 0.16
CHMP4BP1-201ENST00000556017 ASAP3Q8TDY4 903 aa16.02■□□□□ 0.16
CHMP4BP1-201ENST00000556017 ZNF707Q96C28 371 aaPredicted RBP16.02■□□□□ 0.16
CHMP4BP1-201ENST00000556017 SNX27Q96L92 541 aa16.02■□□□□ 0.16
CHMP4BP1-201ENST00000556017 GAD1Q99259 594 aa16.02■□□□□ 0.16
CHMP4BP1-201ENST00000556017 IRF2BPLQ9H1B7 796 aa16.02■□□□□ 0.16
CHMP4BP1-201ENST00000556017 MAN1C1Q9NR34 630 aa16.02■□□□□ 0.16
CHMP4BP1-201ENST00000556017 KANSL3Q9P2N6 904 aa16.02■□□□□ 0.16
CHMP4BP1-201ENST00000556017 DUSP12Q9UNI6 340 aa16.02■□□□□ 0.16
CHMP4BP1-201ENST00000556017 PRG3Q9Y2Y8 225 aaPredicted RBP16.02■□□□□ 0.16
CHMP4BP1-201ENST00000556017 NOTCH4Q99466 2003 aa16.01■□□□□ 0.15
CHMP4BP1-201ENST00000556017 CCDC194A0A1B0GVG4 234 aa16.01■□□□□ 0.15
CHMP4BP1-201ENST00000556017 C2CD2LO14523 706 aa16.01■□□□□ 0.15
CHMP4BP1-201ENST00000556017 GAS2O43903 313 aaKnown RBP16.01■□□□□ 0.15
CHMP4BP1-201ENST00000556017 RFPL2O75678 378 aa16.01■□□□□ 0.15
CHMP4BP1-201ENST00000556017 LYPLA2O95372 231 aa16.01■□□□□ 0.15
CHMP4BP1-201ENST00000556017 AOC1P19801 751 aa16.01■□□□□ 0.15
CHMP4BP1-201ENST00000556017 ARL2P36404 184 aa16.01■□□□□ 0.15
CHMP4BP1-201ENST00000556017 MLH1P40692 756 aa16.01■□□□□ 0.15
CHMP4BP1-201ENST00000556017 SCNN1GP51170 649 aa16.01■□□□□ 0.15
CHMP4BP1-201ENST00000556017 POU5F1BQ06416 359 aa16.01■□□□□ 0.15
CHMP4BP1-201ENST00000556017 CAPSQ13938 189 aa16.01■□□□□ 0.15
CHMP4BP1-201ENST00000556017 XKR9Q5GH70 373 aa16.01■□□□□ 0.15
CHMP4BP1-201ENST00000556017 NCAPH2Q6IBW4 605 aa16.01■□□□□ 0.15
CHMP4BP1-201ENST00000556017 CCDC149Q6ZUS6 474 aa16.01■□□□□ 0.15
CHMP4BP1-201ENST00000556017 OTOP3Q7RTS5 596 aa16.01■□□□□ 0.15
CHMP4BP1-201ENST00000556017 RSAD2Q8WXG1 361 aa16.01■□□□□ 0.15
CHMP4BP1-201ENST00000556017 B3GALT6Q96L58 329 aa16.01■□□□□ 0.15
CHMP4BP1-201ENST00000556017 EMILIN2Q9BXX0 1053 aa16.01■□□□□ 0.15
CHMP4BP1-201ENST00000556017 RHOBTB2Q9BYZ6 727 aa16.01■□□□□ 0.15
CHMP4BP1-201ENST00000556017 SLKQ9H2G2 1235 aaPredicted RBP16.01■□□□□ 0.15
CHMP4BP1-201ENST00000556017 ZSWIM4Q9H7M6 989 aa16.01■□□□□ 0.15
CHMP4BP1-201ENST00000556017 MRPL17Q9NRX2 175 aaKnown RBP16.01■□□□□ 0.15
CHMP4BP1-201ENST00000556017 PDRG1Q9NUG6 133 aa16.01■□□□□ 0.15
CHMP4BP1-201ENST00000556017 FANCMQ8IYD8 2048 aa16.01■□□□□ 0.15
CHMP4BP1-201ENST00000556017 EP300Q09472 2414 aaPredicted RBP16■□□□□ 0.15
CHMP4BP1-201ENST00000556017 TRIP11Q15643 1979 aa16■□□□□ 0.15
CHMP4BP1-201ENST00000556017 ASAP2O43150 1006 aa16■□□□□ 0.15
CHMP4BP1-201ENST00000556017 B4GALT5O43286 388 aa16■□□□□ 0.15
CHMP4BP1-201ENST00000556017 DKC1O60832 514 aaKnown RBP eCLIP16■□□□□ 0.15
CHMP4BP1-201ENST00000556017 MYBP10242 640 aa16■□□□□ 0.15
CHMP4BP1-201ENST00000556017 ITGA4P13612 1032 aa16■□□□□ 0.15
CHMP4BP1-201ENST00000556017 ARF4P18085 180 aaPredicted RBP16■□□□□ 0.15
CHMP4BP1-201ENST00000556017 DSG1Q02413 1049 aa16■□□□□ 0.15
CHMP4BP1-201ENST00000556017 TDGQ13569 410 aa16■□□□□ 0.15
CHMP4BP1-201ENST00000556017 LILRA6Q6PI73 481 aa16■□□□□ 0.15
CHMP4BP1-201ENST00000556017 EXOC8Q8IYI6 725 aa16■□□□□ 0.15
CHMP4BP1-201ENST00000556017 TCP11Q8WWU5 503 aa16■□□□□ 0.15
CHMP4BP1-201ENST00000556017 MYADMQ96S97 322 aa16■□□□□ 0.15
CHMP4BP1-201ENST00000556017 MTRQ99707 1265 aa16■□□□□ 0.15
CHMP4BP1-201ENST00000556017 EIF2AK1Q9BQI3 630 aaKnown RBP16■□□□□ 0.15
CHMP4BP1-201ENST00000556017 GPR62Q9BZJ7 368 aa16■□□□□ 0.15
CHMP4BP1-201ENST00000556017 CSRNP2Q9H175 543 aa16■□□□□ 0.15
CHMP4BP1-201ENST00000556017 NXF3Q9H4D5 531 aaKnown RBP16■□□□□ 0.15
CHMP4BP1-201ENST00000556017 WDR6Q9NNW5 1121 aaKnown RBP16■□□□□ 0.15
CHMP4BP1-201ENST00000556017 CACNG4Q9UBN1 327 aa16■□□□□ 0.15
CHMP4BP1-201ENST00000556017 STK39Q9UEW8 545 aa16■□□□□ 0.15
CHMP4BP1-201ENST00000556017 COL4A3Q01955 1670 aa15.99■□□□□ 0.15
CHMP4BP1-201ENST00000556017 CACNA1AO00555 2505 aa15.99■□□□□ 0.15
CHMP4BP1-201ENST00000556017 A0A087WWV3 80 aa15.99■□□□□ 0.15
CHMP4BP1-201ENST00000556017 CCDC195A0A1B0GUA6 201 aa15.99■□□□□ 0.15
CHMP4BP1-201ENST00000556017 KRBA1A5PL33 1030 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms