RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 CCDC73Q6ZRK6 1079 aa13.61□□□□□ -0.23
SYNE2-214ENST00000554928 SPIRE2Q8WWL2 714 aa13.61□□□□□ -0.23
SYNE2-214ENST00000554928 DDX12PQ92771 950 aa13.61□□□□□ -0.23
SYNE2-214ENST00000554928 ZBTB45Q96K62 511 aaPredicted RBP13.61□□□□□ -0.23
SYNE2-214ENST00000554928 SPATA32Q96LK8 384 aa13.61□□□□□ -0.23
SYNE2-214ENST00000554928 NTPCRQ9BSD7 190 aaKnown RBP13.61□□□□□ -0.23
SYNE2-214ENST00000554928 TARS2Q9BW92 718 aaKnown RBP13.61□□□□□ -0.23
SYNE2-214ENST00000554928 FGFBP2Q9BYJ0 223 aa13.61□□□□□ -0.23
SYNE2-214ENST00000554928 IKZF4Q9H2S9 585 aa13.61□□□□□ -0.23
SYNE2-214ENST00000554928 ZHX3Q9H4I2 956 aa13.61□□□□□ -0.23
SYNE2-214ENST00000554928 MIOSQ9NXC5 875 aa13.61□□□□□ -0.23
SYNE2-214ENST00000554928 KCND2Q9NZV8 630 aa13.61□□□□□ -0.23
SYNE2-214ENST00000554928 MTCH2Q9Y6C9 303 aa13.61□□□□□ -0.23
SYNE2-214ENST00000554928 FNDC1Q4ZHG4 1894 aaPredicted RBP13.61□□□□□ -0.23
SYNE2-214ENST00000554928 PHLPP2Q6ZVD8 1323 aa13.61□□□□□ -0.23
SYNE2-214ENST00000554928 A0A1B0GVL5 298 aa13.6□□□□□ -0.23
SYNE2-214ENST00000554928 K7ERI5 159 aa13.6□□□□□ -0.23
SYNE2-214ENST00000554928 ABLIM1O14639 778 aa13.6□□□□□ -0.23
SYNE2-214ENST00000554928 POLR2DO15514 142 aaKnown RBP13.6□□□□□ -0.23
SYNE2-214ENST00000554928 FAM13AO94988 1023 aa13.6□□□□□ -0.23
SYNE2-214ENST00000554928 DNAJB1P25685 340 aa13.6□□□□□ -0.23
SYNE2-214ENST00000554928 EFNA5P52803 228 aa13.6□□□□□ -0.23
SYNE2-214ENST00000554928 NCKAP1LP55160 1127 aa13.6□□□□□ -0.23
SYNE2-214ENST00000554928 MYO9BQ13459 2157 aa13.6□□□□□ -0.23
SYNE2-214ENST00000554928 GPM6BQ13491 265 aa13.6□□□□□ -0.23
SYNE2-214ENST00000554928 PCBP1Q15365 356 aaKnown RBP eCLIP13.6□□□□□ -0.23
SYNE2-214ENST00000554928 CCDC85BQ15834 202 aaPredicted RBP13.6□□□□□ -0.23
SYNE2-214ENST00000554928 SLC27A1Q6PCB7 646 aa13.6□□□□□ -0.23
SYNE2-214ENST00000554928 FAM43BQ6ZT52 329 aaPredicted RBP13.6□□□□□ -0.23
SYNE2-214ENST00000554928 SV2BQ7L1I2 683 aa13.6□□□□□ -0.23
SYNE2-214ENST00000554928 SFR1Q86XK3 245 aa13.6□□□□□ -0.23
SYNE2-214ENST00000554928 GRAMD1CQ8IYS0 662 aa13.6□□□□□ -0.23
SYNE2-214ENST00000554928 MICALL1Q8N3F8 863 aa13.6□□□□□ -0.23
SYNE2-214ENST00000554928 MYCT1Q8N699 235 aa13.6□□□□□ -0.23
SYNE2-214ENST00000554928 CEP120Q8N960 986 aa13.6□□□□□ -0.23
SYNE2-214ENST00000554928 KLHL23Q8NBE8 558 aa13.6□□□□□ -0.23
SYNE2-214ENST00000554928 PPM1EQ8WY54 764 aa13.6□□□□□ -0.23
SYNE2-214ENST00000554928 CCDC51Q96ER9 411 aa13.6□□□□□ -0.23
SYNE2-214ENST00000554928 PRIMPOLQ96LW4 560 aa13.6□□□□□ -0.23
SYNE2-214ENST00000554928 ZFP42Q96MM3 310 aa13.6□□□□□ -0.23
SYNE2-214ENST00000554928 GAD1Q99259 594 aa13.6□□□□□ -0.23
SYNE2-214ENST00000554928 GAS2L1Q99501 681 aaPredicted RBP13.6□□□□□ -0.23
SYNE2-214ENST00000554928 TMEM134Q9H6X4 195 aa13.6□□□□□ -0.23
SYNE2-214ENST00000554928 ALG13Q9NP73 1137 aaKnown RBP13.6□□□□□ -0.23
SYNE2-214ENST00000554928 PRDM6Q9NQX0 595 aa13.6□□□□□ -0.23
SYNE2-214ENST00000554928 TBC1D13Q9NVG8 400 aa13.6□□□□□ -0.23
SYNE2-214ENST00000554928 KLK14Q9P0G3 267 aa13.6□□□□□ -0.23
SYNE2-214ENST00000554928 ODF2LQ9ULJ1 636 aa13.6□□□□□ -0.23
SYNE2-214ENST00000554928 KIAA1671Q9BY89 1806 aa13.6□□□□□ -0.23
SYNE2-214ENST00000554928 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.59□□□□□ -0.23
SYNE2-214ENST00000554928 NT5C1B-RDH14C9J2C7 533 aa13.59□□□□□ -0.23
SYNE2-214ENST00000554928 C5orf67F2Z3F1 127 aa13.59□□□□□ -0.23
SYNE2-214ENST00000554928 H3BNC9 293 aa13.59□□□□□ -0.23
SYNE2-214ENST00000554928 ITGB1P05556 798 aa13.59□□□□□ -0.23
SYNE2-214ENST00000554928 ITGA4P13612 1032 aa13.59□□□□□ -0.23
SYNE2-214ENST00000554928 PFKFB1P16118 471 aa13.59□□□□□ -0.23
SYNE2-214ENST00000554928 MLH1P40692 756 aa13.59□□□□□ -0.23
SYNE2-214ENST00000554928 NUCB2P80303 420 aa13.59□□□□□ -0.23
SYNE2-214ENST00000554928 CAMK1Q14012 370 aa13.59□□□□□ -0.23
SYNE2-214ENST00000554928 TMEM132AQ24JP5 1023 aa13.59□□□□□ -0.23
SYNE2-214ENST00000554928 ZC2HC1CQ53FD0 456 aaPredicted RBP13.59□□□□□ -0.23
SYNE2-214ENST00000554928 SPOUT1Q5T280 376 aaKnown RBP13.59□□□□□ -0.23
SYNE2-214ENST00000554928 ATF7IP2Q5U623 682 aa13.59□□□□□ -0.23
SYNE2-214ENST00000554928 TMEM173Q86WV6 379 aaPredicted RBP13.59□□□□□ -0.23
SYNE2-214ENST00000554928 ZNF280BQ86YH2 543 aa13.59□□□□□ -0.23
SYNE2-214ENST00000554928 ABI1Q8IZP0 508 aa13.59□□□□□ -0.23
SYNE2-214ENST00000554928 COLGALT1Q8NBJ5 622 aa13.59□□□□□ -0.23
SYNE2-214ENST00000554928 GSTCDQ8NEC7 633 aa13.59□□□□□ -0.23
SYNE2-214ENST00000554928 MAFAQ8NHW3 353 aaPredicted RBP13.59□□□□□ -0.23
SYNE2-214ENST00000554928 BCL7CQ8WUZ0 217 aaPredicted RBP13.59□□□□□ -0.23
SYNE2-214ENST00000554928 HPS3Q969F9 1004 aa13.59□□□□□ -0.23
SYNE2-214ENST00000554928 ACO2Q99798 780 aaKnown RBP13.59□□□□□ -0.23
SYNE2-214ENST00000554928 HAPLN2Q9GZV7 340 aa13.59□□□□□ -0.23
SYNE2-214ENST00000554928 CDT1Q9H211 546 aa13.59□□□□□ -0.23
SYNE2-214ENST00000554928 GOLPH3LQ9H4A5 285 aa13.59□□□□□ -0.23
SYNE2-214ENST00000554928 NRDE2Q9H7Z3 1164 aa13.59□□□□□ -0.23
SYNE2-214ENST00000554928 RSAD1Q9HA92 442 aa13.59□□□□□ -0.23
SYNE2-214ENST00000554928 C17orf75Q9HAS0 396 aa13.59□□□□□ -0.23
SYNE2-214ENST00000554928 PARVGQ9HBI0 331 aa13.59□□□□□ -0.23
SYNE2-214ENST00000554928 PTPRHQ9HD43 1115 aa13.59□□□□□ -0.23
SYNE2-214ENST00000554928 SNTG2Q9NY99 539 aa13.59□□□□□ -0.23
SYNE2-214ENST00000554928 TBC1D7Q9P0N9 293 aa13.59□□□□□ -0.23
SYNE2-214ENST00000554928 DNAJB4Q9UDY4 337 aa13.59□□□□□ -0.23
SYNE2-214ENST00000554928 PLAGL2Q9UPG8 496 aa13.59□□□□□ -0.23
SYNE2-214ENST00000554928 PCDHGC5Q9Y5F6 944 aa13.59□□□□□ -0.23
SYNE2-214ENST00000554928 TRANK1O15050 2925 aa13.59□□□□□ -0.23
SYNE2-214ENST00000554928 REV3LO60673 3130 aa13.59□□□□□ -0.23
SYNE2-214ENST00000554928 PRUNE2Q8WUY3 3088 aa13.58□□□□□ -0.23
SYNE2-214ENST00000554928 TISP43B9A030 160 aa13.58□□□□□ -0.24
SYNE2-214ENST00000554928 K7ENM7 598 aa13.58□□□□□ -0.24
SYNE2-214ENST00000554928 N4BP3O15049 544 aa13.58□□□□□ -0.24
SYNE2-214ENST00000554928 MEFVO15553 781 aaPredicted RBP13.58□□□□□ -0.24
SYNE2-214ENST00000554928 HOXA2O43364 376 aa13.58□□□□□ -0.24
SYNE2-214ENST00000554928 ACTN4O43707 911 aaKnown RBP13.58□□□□□ -0.24
SYNE2-214ENST00000554928 TRAK2O60296 914 aa13.58□□□□□ -0.24
SYNE2-214ENST00000554928 TBCAO75347 108 aaKnown RBP13.58□□□□□ -0.24
SYNE2-214ENST00000554928 DDHD2O94830 711 aa13.58□□□□□ -0.24
SYNE2-214ENST00000554928 POMCP01189 267 aa13.58□□□□□ -0.24
SYNE2-214ENST00000554928 SKIP12755 728 aa13.58□□□□□ -0.24
SYNE2-214ENST00000554928 SCNN1GP51170 649 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms