RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 TNRC18O15417 2968 aaPredicted RBP5.17□□□□□ -1.58
ATXN3-227ENST00000554491 FSD2A1L4K1 749 aa5.17□□□□□ -1.58
ATXN3-227ENST00000554491 FOXS1O43638 330 aa5.17□□□□□ -1.58
ATXN3-227ENST00000554491 FAM200BP0CF97 657 aa5.17□□□□□ -1.58
ATXN3-227ENST00000554491 ABCD1P33897 745 aa5.17□□□□□ -1.58
ATXN3-227ENST00000554491 MRE11P49959 708 aa5.17□□□□□ -1.58
ATXN3-227ENST00000554491 PSMC1P62191 440 aaKnown RBP5.17□□□□□ -1.58
ATXN3-227ENST00000554491 KLF10Q13118 480 aa5.17□□□□□ -1.58
ATXN3-227ENST00000554491 SF3A1Q15459 793 aaKnown RBP5.17□□□□□ -1.58
ATXN3-227ENST00000554491 PAN2Q504Q3 1202 aaKnown RBP5.17□□□□□ -1.58
ATXN3-227ENST00000554491 HSP90AB2PQ58FF8 381 aa5.17□□□□□ -1.58
ATXN3-227ENST00000554491 TCTN3Q6NUS6 607 aa5.17□□□□□ -1.58
ATXN3-227ENST00000554491 KCNT2Q6UVM3 1135 aa5.17□□□□□ -1.58
ATXN3-227ENST00000554491 CLEC4GQ6UXB4 293 aa5.17□□□□□ -1.58
ATXN3-227ENST00000554491 ZNF771Q7L3S4 317 aaPredicted RBP5.17□□□□□ -1.58
ATXN3-227ENST00000554491 OTOP3Q7RTS5 596 aa5.17□□□□□ -1.58
ATXN3-227ENST00000554491 COL23A1Q86Y22 540 aaPredicted RBP5.17□□□□□ -1.58
ATXN3-227ENST00000554491 LRRC37BQ96QE4 947 aa5.17□□□□□ -1.58
ATXN3-227ENST00000554491 KCNJ15Q99712 375 aa5.17□□□□□ -1.58
ATXN3-227ENST00000554491 TMX4Q9H1E5 349 aaPredicted RBP5.17□□□□□ -1.58
ATXN3-227ENST00000554491 PCED1AQ9H1Q7 454 aa5.17□□□□□ -1.58
ATXN3-227ENST00000554491 C14orf93Q9H972 538 aaKnown RBP5.17□□□□□ -1.58
ATXN3-227ENST00000554491 ZNF408Q9H9D4 720 aa5.17□□□□□ -1.58
ATXN3-227ENST00000554491 CWC25Q9NXE8 425 aaPredicted RBP5.17□□□□□ -1.58
ATXN3-227ENST00000554491 ING1Q9UK53 422 aaPredicted RBP5.17□□□□□ -1.58
ATXN3-227ENST00000554491 PTPN22Q9Y2R2 807 aa5.17□□□□□ -1.58
ATXN3-227ENST00000554491 NSD2O96028 1365 aa5.16□□□□□ -1.58
ATXN3-227ENST00000554491 TONSLQ96HA7 1378 aa5.16□□□□□ -1.58
ATXN3-227ENST00000554491 CCDC88AQ3V6T2 1871 aa5.16□□□□□ -1.58
ATXN3-227ENST00000554491 ANKRD18BA2A2Z9 1011 aa5.16□□□□□ -1.58
ATXN3-227ENST00000554491 NKRFO15226 690 aaKnown RBP eCLIP5.16□□□□□ -1.58
ATXN3-227ENST00000554491 CCP110O43303 1012 aa5.16□□□□□ -1.58
ATXN3-227ENST00000554491 EIF3JO75822 258 aaKnown RBP5.16□□□□□ -1.58
ATXN3-227ENST00000554491 FBXO21O94952 628 aa5.16□□□□□ -1.58
ATXN3-227ENST00000554491 HSPA5P11021 654 aaKnown RBP5.16□□□□□ -1.58
ATXN3-227ENST00000554491 XRCC6P12956 609 aaKnown RBP eCLIP5.16□□□□□ -1.58
ATXN3-227ENST00000554491 FAHP16930 419 aa5.16□□□□□ -1.58
ATXN3-227ENST00000554491 CSF2RBP32927 897 aa5.16□□□□□ -1.58
ATXN3-227ENST00000554491 COPB2P35606 906 aa5.16□□□□□ -1.58
ATXN3-227ENST00000554491 CTCFP49711 727 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-227ENST00000554491 PFKPQ01813 784 aa5.16□□□□□ -1.58
ATXN3-227ENST00000554491 BIRC2Q13490 618 aa5.16□□□□□ -1.58
ATXN3-227ENST00000554491 GJC2Q5T442 439 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-227ENST00000554491 CD276Q5ZPR3 534 aa5.16□□□□□ -1.58
ATXN3-227ENST00000554491 KLHL10Q6JEL2 608 aa5.16□□□□□ -1.58
ATXN3-227ENST00000554491 CCDC91Q7Z6B0 441 aa5.16□□□□□ -1.58
ATXN3-227ENST00000554491 CELF2-AS1Q8N7Q2 184 aa5.16□□□□□ -1.58
ATXN3-227ENST00000554491 TBC1D22AQ8WUA7 517 aa5.16□□□□□ -1.58
ATXN3-227ENST00000554491 EVI5LQ96CN4 794 aa5.16□□□□□ -1.58
ATXN3-227ENST00000554491 LMF1Q96S06 567 aa5.16□□□□□ -1.58
ATXN3-227ENST00000554491 MENTQ9BUN1 341 aa5.16□□□□□ -1.58
ATXN3-227ENST00000554491 EPN3Q9H201 632 aa5.16□□□□□ -1.58
ATXN3-227ENST00000554491 ST7Q9NRC1 585 aa5.16□□□□□ -1.58
ATXN3-227ENST00000554491 KCND1Q9NSA2 647 aa5.16□□□□□ -1.58
ATXN3-227ENST00000554491 IGSF5Q9NSI5 407 aa5.16□□□□□ -1.58
ATXN3-227ENST00000554491 ARHGAP20Q9P2F6 1191 aa5.16□□□□□ -1.58
ATXN3-227ENST00000554491 TESMINQ9Y4I5 508 aa5.16□□□□□ -1.58
ATXN3-227ENST00000554491 SLC4A7Q9Y6M7 1214 aa5.16□□□□□ -1.58
ATXN3-227ENST00000554491 C4AP0C0L4 1744 aa5.16□□□□□ -1.58
ATXN3-227ENST00000554491 ACEP12821 1306 aa5.16□□□□□ -1.58
ATXN3-227ENST00000554491 LTBP1Q14766 1721 aa5.15□□□□□ -1.58
ATXN3-227ENST00000554491 ANKRD62A6NC57 917 aa5.15□□□□□ -1.59
ATXN3-227ENST00000554491 H0YHG0 523 aa5.15□□□□□ -1.59
ATXN3-227ENST00000554491 AGRPO00253 132 aa5.15□□□□□ -1.59
ATXN3-227ENST00000554491 SH3BP5O60239 455 aa5.15□□□□□ -1.59
ATXN3-227ENST00000554491 IL18BPO95998 194 aa5.15□□□□□ -1.59
ATXN3-227ENST00000554491 ZNF888P0CJ79 500 aaPredicted RBP5.15□□□□□ -1.59
ATXN3-227ENST00000554491 GRK2P25098 689 aa5.15□□□□□ -1.59
ATXN3-227ENST00000554491 GRK3P35626 688 aa5.15□□□□□ -1.59
ATXN3-227ENST00000554491 MAGEA8P43361 318 aa5.15□□□□□ -1.59
ATXN3-227ENST00000554491 GSCP56915 257 aaPredicted RBP5.15□□□□□ -1.59
ATXN3-227ENST00000554491 HMGN5P82970 282 aaKnown RBP5.15□□□□□ -1.59
ATXN3-227ENST00000554491 SARNPP82979 210 aaKnown RBP5.15□□□□□ -1.59
ATXN3-227ENST00000554491 NTRK3Q16288 839 aa5.15□□□□□ -1.59
ATXN3-227ENST00000554491 VPS37DQ86XT2 251 aa5.15□□□□□ -1.59
ATXN3-227ENST00000554491 ACRBPQ8NEB7 543 aa5.15□□□□□ -1.59
ATXN3-227ENST00000554491 UHMK1Q8TAS1 419 aaKnown RBP5.15□□□□□ -1.59
ATXN3-227ENST00000554491 AJUBAQ96IF1 538 aa5.15□□□□□ -1.59
ATXN3-227ENST00000554491 FEZ1Q99689 392 aa5.15□□□□□ -1.59
ATXN3-227ENST00000554491 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.15□□□□□ -1.59
ATXN3-227ENST00000554491 MAF1Q9H063 256 aa5.15□□□□□ -1.59
ATXN3-227ENST00000554491 SEC61A2Q9H9S3 476 aa5.15□□□□□ -1.59
ATXN3-227ENST00000554491 METTL14Q9HCE5 456 aaKnown RBP5.15□□□□□ -1.59
ATXN3-227ENST00000554491 CHCHD3Q9NX63 227 aaKnown RBP5.15□□□□□ -1.59
ATXN3-227ENST00000554491 SUN2Q9UH99 717 aa5.15□□□□□ -1.59
ATXN3-227ENST00000554491 CCNL1Q9UK58 526 aaPredicted RBP5.15□□□□□ -1.59
ATXN3-227ENST00000554491 SUFUQ9UMX1 484 aa5.15□□□□□ -1.59
ATXN3-227ENST00000554491 DDX49Q9Y6V7 483 aaKnown RBP5.15□□□□□ -1.59
ATXN3-227ENST00000554491 CNTNAP1P78357 1384 aa5.15□□□□□ -1.59
ATXN3-227ENST00000554491 ANKRD36BQ8N2N9 1353 aa5.15□□□□□ -1.59
ATXN3-227ENST00000554491 NSD3Q9BZ95 1437 aa5.14□□□□□ -1.59
ATXN3-227ENST00000554491 UQCRHLA0A096LP55 91 aa5.14□□□□□ -1.59
ATXN3-227ENST00000554491 BLACEA4D250 179 aa5.14□□□□□ -1.59
ATXN3-227ENST00000554491 CCDC85CA6NKD9 419 aa5.14□□□□□ -1.59
ATXN3-227ENST00000554491 ACOT7O00154 380 aa5.14□□□□□ -1.59
ATXN3-227ENST00000554491 PES1O00541 588 aaKnown RBP5.14□□□□□ -1.59
ATXN3-227ENST00000554491 CHGBP05060 677 aa5.14□□□□□ -1.59
ATXN3-227ENST00000554491 UQCRHP07919 91 aa5.14□□□□□ -1.59
ATXN3-227ENST00000554491 FGRP09769 529 aa5.14□□□□□ -1.59
ATXN3-227ENST00000554491 GNAT1P11488 350 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms