RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 KRT85P78386 507 aa6.75□□□□□ -1.33
SCFD1-211ENST00000554437 DUSP2Q05923 314 aa6.75□□□□□ -1.33
SCFD1-211ENST00000554437 DUSP8Q13202 625 aa6.75□□□□□ -1.33
SCFD1-211ENST00000554437 C19orf54Q5BKX5 351 aa6.75□□□□□ -1.33
SCFD1-211ENST00000554437 ZBTB46Q86UZ6 589 aa6.75□□□□□ -1.33
SCFD1-211ENST00000554437 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.75□□□□□ -1.33
SCFD1-211ENST00000554437 GPR156Q8NFN8 814 aa6.75□□□□□ -1.33
SCFD1-211ENST00000554437 OR5M3Q8NGP4 307 aa6.75□□□□□ -1.33
SCFD1-211ENST00000554437 TCF25Q9BQ70 676 aa6.75□□□□□ -1.33
SCFD1-211ENST00000554437 SLC13A1Q9BZW2 595 aa6.75□□□□□ -1.33
SCFD1-211ENST00000554437 DMRT3Q9NQL9 472 aa6.75□□□□□ -1.33
SCFD1-211ENST00000554437 PLA2G3Q9NZ20 509 aa6.75□□□□□ -1.33
SCFD1-211ENST00000554437 DNM3Q9UQ16 869 aa6.75□□□□□ -1.33
SCFD1-211ENST00000554437 PHF2O75151 1096 aa6.74□□□□□ -1.33
SCFD1-211ENST00000554437 NDUFS2O75306 463 aa6.74□□□□□ -1.33
SCFD1-211ENST00000554437 RAD17O75943 681 aa6.74□□□□□ -1.33
SCFD1-211ENST00000554437 SNUPNO95149 360 aaKnown RBP6.74□□□□□ -1.33
SCFD1-211ENST00000554437 CASRP41180 1078 aa6.74□□□□□ -1.33
SCFD1-211ENST00000554437 NEK2P51955 445 aa6.74□□□□□ -1.33
SCFD1-211ENST00000554437 ICAM4Q14773 271 aa6.74□□□□□ -1.33
SCFD1-211ENST00000554437 EFCAB2Q5VUJ9 269 aa6.74□□□□□ -1.33
SCFD1-211ENST00000554437 CHST13Q8NET6 341 aa6.74□□□□□ -1.33
SCFD1-211ENST00000554437 ARL8AQ96BM9 186 aa6.74□□□□□ -1.33
SCFD1-211ENST00000554437 CHMP4CQ96CF2 233 aa6.74□□□□□ -1.33
SCFD1-211ENST00000554437 TEKT5Q96M29 485 aa6.74□□□□□ -1.33
SCFD1-211ENST00000554437 SAMD11Q96NU1 681 aa6.74□□□□□ -1.33
SCFD1-211ENST00000554437 RBM12Q9NTZ6 932 aaKnown RBP6.74□□□□□ -1.33
SCFD1-211ENST00000554437 SCOCQ9UIL1 159 aa6.74□□□□□ -1.33
SCFD1-211ENST00000554437 PATE3B3GLJ2 98 aa6.73□□□□□ -1.33
SCFD1-211ENST00000554437 ZNF623O75123 536 aa6.73□□□□□ -1.33
SCFD1-211ENST00000554437 GYPEP15421 78 aa6.73□□□□□ -1.33
SCFD1-211ENST00000554437 C5AR1P21730 350 aa6.73□□□□□ -1.33
SCFD1-211ENST00000554437 MSX2P35548 267 aaPredicted RBP6.73□□□□□ -1.33
SCFD1-211ENST00000554437 MCAMP43121 646 aa6.73□□□□□ -1.33
SCFD1-211ENST00000554437 FOXL1Q12952 345 aa6.73□□□□□ -1.33
SCFD1-211ENST00000554437 ODF1Q14990 250 aa6.73□□□□□ -1.33
SCFD1-211ENST00000554437 NOMO1Q15155 1222 aa6.73□□□□□ -1.33
SCFD1-211ENST00000554437 FAM111BQ6SJ93 734 aa6.73□□□□□ -1.33
SCFD1-211ENST00000554437 ZNF480Q8WV37 535 aa6.73□□□□□ -1.33
SCFD1-211ENST00000554437 EPC1Q9H2F5 836 aa6.73□□□□□ -1.33
SCFD1-211ENST00000554437 AASDHPPTQ9NRN7 309 aa6.73□□□□□ -1.33
SCFD1-211ENST00000554437 ST6GALNAC2Q9UJ37 374 aa6.73□□□□□ -1.33
SCFD1-211ENST00000554437 CNOT11Q9UKZ1 510 aaKnown RBP6.73□□□□□ -1.33
SCFD1-211ENST00000554437 SLC30A1Q9Y6M5 507 aa6.73□□□□□ -1.33
SCFD1-211ENST00000554437 ECHS1P30084 290 aa6.72□□□□□ -1.33
SCFD1-211ENST00000554437 PPP3CAQ08209 521 aa6.72□□□□□ -1.33
SCFD1-211ENST00000554437 TTF1Q15361 905 aaPredicted RBP6.72□□□□□ -1.33
SCFD1-211ENST00000554437 PLEKHG6Q3KR16 790 aa6.72□□□□□ -1.33
SCFD1-211ENST00000554437 POLNQ7Z5Q5 900 aa6.72□□□□□ -1.33
SCFD1-211ENST00000554437 D2HGDHQ8N465 521 aa6.72□□□□□ -1.33
SCFD1-211ENST00000554437 DNERQ8NFT8 737 aa6.72□□□□□ -1.33
SCFD1-211ENST00000554437 Q8TCH9 128 aa6.72□□□□□ -1.33
SCFD1-211ENST00000554437 CDC5LQ99459 802 aaKnown RBP6.72□□□□□ -1.33
SCFD1-211ENST00000554437 DEF6Q9H4E7 631 aa6.72□□□□□ -1.33
SCFD1-211ENST00000554437 GPRC5DQ9NZD1 345 aa6.72□□□□□ -1.33
SCFD1-211ENST00000554437 TUBD1Q9UJT1 453 aa6.72□□□□□ -1.33
SCFD1-211ENST00000554437 LUC7L2Q9Y383 392 aaKnown RBP6.72□□□□□ -1.33
SCFD1-211ENST00000554437 ITGA10O75578 1167 aa6.71□□□□□ -1.34
SCFD1-211ENST00000554437 GASTP01350 101 aa6.71□□□□□ -1.34
SCFD1-211ENST00000554437 COMTP21964 271 aa6.71□□□□□ -1.34
SCFD1-211ENST00000554437 RECQLP46063 649 aaPredicted RBP6.71□□□□□ -1.34
SCFD1-211ENST00000554437 SLC16A1P53985 500 aa6.71□□□□□ -1.34
SCFD1-211ENST00000554437 PER3P56645 1201 aa6.71□□□□□ -1.34
SCFD1-211ENST00000554437 MST1LQ2TV78 715 aa6.71□□□□□ -1.34
SCFD1-211ENST00000554437 HS1BP3Q53T59 392 aa6.71□□□□□ -1.34
SCFD1-211ENST00000554437 FKBP15Q5T1M5 1219 aa6.71□□□□□ -1.34
SCFD1-211ENST00000554437 GJC2Q5T442 439 aaPredicted RBP6.71□□□□□ -1.34
SCFD1-211ENST00000554437 NRG4Q8WWG1 115 aa6.71□□□□□ -1.34
SCFD1-211ENST00000554437 HOOK2Q96ED9 719 aa6.71□□□□□ -1.34
SCFD1-211ENST00000554437 UHRF1Q96T88 793 aaPredicted RBP6.71□□□□□ -1.34
SCFD1-211ENST00000554437 SMPD4Q9NXE4 827 aa6.71□□□□□ -1.34
SCFD1-211ENST00000554437 SAP30BPQ9UHR5 308 aaKnown RBP6.71□□□□□ -1.34
SCFD1-211ENST00000554437 INTUQ9ULD6 942 aa6.71□□□□□ -1.34
SCFD1-211ENST00000554437 STC2O76061 302 aa6.7□□□□□ -1.34
SCFD1-211ENST00000554437 HSP90B1P14625 803 aaKnown RBP6.7□□□□□ -1.34
SCFD1-211ENST00000554437 GZMKP49863 264 aa6.7□□□□□ -1.34
SCFD1-211ENST00000554437 KIF23Q02241 960 aaPredicted RBP6.7□□□□□ -1.34
SCFD1-211ENST00000554437 HHEXQ03014 270 aa6.7□□□□□ -1.34
SCFD1-211ENST00000554437 ODR4Q5SWX8 454 aa6.7□□□□□ -1.34
SCFD1-211ENST00000554437 Q6ZVL8 140 aa6.7□□□□□ -1.34
SCFD1-211ENST00000554437 THEMISQ8N1K5 641 aaPredicted RBP6.7□□□□□ -1.34
SCFD1-211ENST00000554437 LILRA3Q8N6C8 439 aaPredicted RBP6.7□□□□□ -1.34
SCFD1-211ENST00000554437 MDM1Q8TC05 714 aa6.7□□□□□ -1.34
SCFD1-211ENST00000554437 DPF2Q92785 391 aa6.7□□□□□ -1.34
SCFD1-211ENST00000554437 IL17RAQ96F46 866 aa6.7□□□□□ -1.34
SCFD1-211ENST00000554437 ZNF512Q96ME7 567 aaPredicted RBP6.7□□□□□ -1.34
SCFD1-211ENST00000554437 C8orf49Q96NF6 230 aa6.7□□□□□ -1.34
SCFD1-211ENST00000554437 MPHOSPH9Q99550 1183 aa6.7□□□□□ -1.34
SCFD1-211ENST00000554437 ENKD1Q9H0I2 346 aa6.7□□□□□ -1.34
SCFD1-211ENST00000554437 CD248Q9HCU0 757 aa6.7□□□□□ -1.34
SCFD1-211ENST00000554437 SH3BP1Q9Y3L3 701 aa6.7□□□□□ -1.34
SCFD1-211ENST00000554437 TCAF1Q9Y4C2 921 aa6.7□□□□□ -1.34
SCFD1-211ENST00000554437 FAM171A2A8MVW0 826 aa6.69□□□□□ -1.34
SCFD1-211ENST00000554437 S100BP04271 92 aaPredicted RBP6.69□□□□□ -1.34
SCFD1-211ENST00000554437 CRHR1P34998 444 aa6.69□□□□□ -1.34
SCFD1-211ENST00000554437 APBA1Q02410 837 aa6.69□□□□□ -1.34
SCFD1-211ENST00000554437 MGAT2Q10469 447 aa6.69□□□□□ -1.34
SCFD1-211ENST00000554437 MRPL49Q13405 166 aaKnown RBP6.69□□□□□ -1.34
SCFD1-211ENST00000554437 FAM214AQ32MH5 1076 aa6.69□□□□□ -1.34
SCFD1-211ENST00000554437 MFSD5Q6N075 450 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms