RNA–Protein interactions for RNA: ENST00000554340.1

NEMP1-204, Transcript of nuclear envelope integral membrane protein 1, humanhuman

TSL 1 (best)

Gene NEMP1, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMP1-204ENST00000554340 ANKEF1Q9NU02 776 aa22.78■■□□□ 1.24
NEMP1-204ENST00000554340 SORCS3Q9UPU3 1222 aa22.78■■□□□ 1.24
NEMP1-204ENST00000554340 FAN1Q9Y2M0 1017 aa22.78■■□□□ 1.24
NEMP1-204ENST00000554340 IPPQ9Y573 584 aa22.78■■□□□ 1.24
NEMP1-204ENST00000554340 ZFHX2Q9C0A1 2572 aaPredicted RBP22.78■■□□□ 1.24
NEMP1-204ENST00000554340 INPPL1O15357 1258 aa22.77■■□□□ 1.24
NEMP1-204ENST00000554340 ITGA4P13612 1032 aa22.77■■□□□ 1.24
NEMP1-204ENST00000554340 FOSBP53539 338 aa22.77■■□□□ 1.24
NEMP1-204ENST00000554340 POU5F1BQ06416 359 aa22.77■■□□□ 1.24
NEMP1-204ENST00000554340 MTMR3Q13615 1198 aa22.77■■□□□ 1.24
NEMP1-204ENST00000554340 TFDP1Q14186 410 aa22.77■■□□□ 1.24
NEMP1-204ENST00000554340 KANK3Q6NY19 840 aa22.77■■□□□ 1.24
NEMP1-204ENST00000554340 NOTUMQ6P988 496 aa22.77■■□□□ 1.24
NEMP1-204ENST00000554340 CABP7Q86V35 215 aa22.77■■□□□ 1.24
NEMP1-204ENST00000554340 IFNLR1Q8IU57 520 aaPredicted RBP22.77■■□□□ 1.24
NEMP1-204ENST00000554340 UBALD2Q8IYN6 164 aa22.77■■□□□ 1.24
NEMP1-204ENST00000554340 KLHL5Q96PQ7 755 aa22.77■■□□□ 1.24
NEMP1-204ENST00000554340 EMILIN2Q9BXX0 1053 aa22.77■■□□□ 1.24
NEMP1-204ENST00000554340 PLXNA3P51805 1871 aa22.77■■□□□ 1.24
NEMP1-204ENST00000554340 DGAT1O75907 488 aa22.76■■□□□ 1.23
NEMP1-204ENST00000554340 TXKP42681 527 aa22.76■■□□□ 1.23
NEMP1-204ENST00000554340 VCPP55072 806 aaKnown RBP22.76■■□□□ 1.23
NEMP1-204ENST00000554340 HMGN5P82970 282 aaKnown RBP22.76■■□□□ 1.23
NEMP1-204ENST00000554340 NCBP1Q09161 790 aaKnown RBP22.76■■□□□ 1.23
NEMP1-204ENST00000554340 ZDHHC14Q8IZN3 488 aa22.76■■□□□ 1.23
NEMP1-204ENST00000554340 TDRD5Q8NAT2 981 aaKnown RBP22.76■■□□□ 1.23
NEMP1-204ENST00000554340 C8orf76Q96K31 380 aa22.76■■□□□ 1.23
NEMP1-204ENST00000554340 EIF2AQ9BY44 585 aaKnown RBP22.76■■□□□ 1.23
NEMP1-204ENST00000554340 SFXN1Q9H9B4 322 aa22.76■■□□□ 1.23
NEMP1-204ENST00000554340 SH2B1Q9NRF2 756 aaPredicted RBP22.76■■□□□ 1.23
NEMP1-204ENST00000554340 DBR1Q9UK59 544 aaKnown RBP22.76■■□□□ 1.23
NEMP1-204ENST00000554340 USTQ9Y2C2 406 aa22.76■■□□□ 1.23
NEMP1-204ENST00000554340 INO80B-WBP1J3KQ70 363 aa22.76■■□□□ 1.23
NEMP1-204ENST00000554340 NRP1O14786 923 aa22.76■■□□□ 1.23
NEMP1-204ENST00000554340 LILRB3O75022 631 aa22.76■■□□□ 1.23
NEMP1-204ENST00000554340 SSBP05455 408 aaKnown RBP eCLIP22.76■■□□□ 1.23
NEMP1-204ENST00000554340 CNPP09543 421 aaKnown RBP22.76■■□□□ 1.23
NEMP1-204ENST00000554340 CLCN4P51793 760 aa22.76■■□□□ 1.23
NEMP1-204ENST00000554340 MBTD1Q05BQ5 628 aa22.76■■□□□ 1.23
NEMP1-204ENST00000554340 GNL2Q13823 731 aaKnown RBP22.76■■□□□ 1.23
NEMP1-204ENST00000554340 CAPSQ13938 189 aa22.76■■□□□ 1.23
NEMP1-204ENST00000554340 CCDC83Q8IWF9 413 aa22.76■■□□□ 1.23
NEMP1-204ENST00000554340 FAM184AQ8NB25 1140 aa22.76■■□□□ 1.23
NEMP1-204ENST00000554340 ASAP3Q8TDY4 903 aa22.76■■□□□ 1.23
NEMP1-204ENST00000554340 CSRNP2Q9H175 543 aa22.76■■□□□ 1.23
NEMP1-204ENST00000554340 MRPL17Q9NRX2 175 aaKnown RBP22.76■■□□□ 1.23
NEMP1-204ENST00000554340 MARCH5Q9NX47 278 aa22.76■■□□□ 1.23
NEMP1-204ENST00000554340 ARL5CA6NH57 179 aa22.75■■□□□ 1.23
NEMP1-204ENST00000554340 SOD2P04179 222 aa22.75■■□□□ 1.23
NEMP1-204ENST00000554340 KLRC2P26717 231 aa22.75■■□□□ 1.23
NEMP1-204ENST00000554340 ARL2P36404 184 aa22.75■■□□□ 1.23
NEMP1-204ENST00000554340 TCF15Q12870 199 aa22.75■■□□□ 1.23
NEMP1-204ENST00000554340 AMHR2Q16671 573 aa22.75■■□□□ 1.23
NEMP1-204ENST00000554340 TMC5Q6UXY8 1006 aa22.75■■□□□ 1.23
NEMP1-204ENST00000554340 COLGALT2Q8IYK4 626 aa22.75■■□□□ 1.23
NEMP1-204ENST00000554340 CPB2Q96IY4 423 aa22.75■■□□□ 1.23
NEMP1-204ENST00000554340 MTMR9Q96QG7 549 aa22.75■■□□□ 1.23
NEMP1-204ENST00000554340 GAD1Q99259 594 aa22.75■■□□□ 1.23
NEMP1-204ENST00000554340 NFKBIZQ9BYH8 718 aa22.75■■□□□ 1.23
NEMP1-204ENST00000554340 RNF39Q9H2S5 420 aa22.75■■□□□ 1.23
NEMP1-204ENST00000554340 PRG3Q9Y2Y8 225 aaPredicted RBP22.75■■□□□ 1.23
NEMP1-204ENST00000554340 WNT7AO00755 349 aa22.74■■□□□ 1.23
NEMP1-204ENST00000554340 BRD1O95696 1058 aa22.74■■□□□ 1.23
NEMP1-204ENST00000554340 URODP06132 367 aa22.74■■□□□ 1.23
NEMP1-204ENST00000554340 GLRA2P23416 452 aa22.74■■□□□ 1.23
NEMP1-204ENST00000554340 AVPR2P30518 371 aa22.74■■□□□ 1.23
NEMP1-204ENST00000554340 MLH1P40692 756 aa22.74■■□□□ 1.23
NEMP1-204ENST00000554340 RARRES1P49788 294 aa22.74■■□□□ 1.23
NEMP1-204ENST00000554340 DSC1Q08554 894 aa22.74■■□□□ 1.23
NEMP1-204ENST00000554340 ORC2Q13416 577 aaPredicted RBP22.74■■□□□ 1.23
NEMP1-204ENST00000554340 GPR149Q86SP6 731 aa22.74■■□□□ 1.23
NEMP1-204ENST00000554340 PLCD3Q8N3E9 789 aa22.74■■□□□ 1.23
NEMP1-204ENST00000554340 HERC2P3Q9BVR0 1158 aa22.74■■□□□ 1.23
NEMP1-204ENST00000554340 HES2Q9Y543 173 aa22.74■■□□□ 1.23
NEMP1-204ENST00000554340 MTCL1Q9Y4B5 1905 aaKnown RBP22.73■■□□□ 1.23
NEMP1-204ENST00000554340 SPDYE4A6NLX3 237 aa22.73■■□□□ 1.23
NEMP1-204ENST00000554340 PDGFBP01127 241 aaPredicted RBP22.73■■□□□ 1.23
NEMP1-204ENST00000554340 XRCC6P12956 609 aaKnown RBP eCLIP22.73■■□□□ 1.23
NEMP1-204ENST00000554340 ATP2B1P20020 1258 aa22.73■■□□□ 1.23
NEMP1-204ENST00000554340 MCM7P33993 719 aa22.73■■□□□ 1.23
NEMP1-204ENST00000554340 FOXP1Q9H334 677 aaPredicted RBP22.73■■□□□ 1.23
NEMP1-204ENST00000554340 SSX2IPQ9Y2D8 614 aa22.73■■□□□ 1.23
NEMP1-204ENST00000554340 USP34Q70CQ2 3546 aa22.73■■□□□ 1.23
NEMP1-204ENST00000554340 EFEMP2O95967 443 aa22.72■■□□□ 1.23
NEMP1-204ENST00000554340 ASGR2P07307 311 aa22.72■■□□□ 1.23
NEMP1-204ENST00000554340 ARF4P18085 180 aaPredicted RBP22.72■■□□□ 1.23
NEMP1-204ENST00000554340 OR1G1P47890 313 aa22.72■■□□□ 1.23
NEMP1-204ENST00000554340 RBM25P49756 843 aaKnown RBP22.72■■□□□ 1.23
NEMP1-204ENST00000554340 SCNN1GP51170 649 aa22.72■■□□□ 1.23
NEMP1-204ENST00000554340 GUCY1B3Q02153 619 aa22.72■■□□□ 1.23
NEMP1-204ENST00000554340 HACE1Q8IYU2 909 aa22.72■■□□□ 1.23
NEMP1-204ENST00000554340 RNF168Q8IYW5 571 aaPredicted RBP22.72■■□□□ 1.23
NEMP1-204ENST00000554340 FEZF2Q8TBJ5 459 aa22.72■■□□□ 1.23
NEMP1-204ENST00000554340 PIGOQ8TEQ8 1089 aa22.72■■□□□ 1.23
NEMP1-204ENST00000554340 ZFP42Q96MM3 310 aa22.72■■□□□ 1.23
NEMP1-204ENST00000554340 RPS6KC1Q96S38 1066 aa22.72■■□□□ 1.23
NEMP1-204ENST00000554340 PHOX2BQ99453 314 aa22.72■■□□□ 1.23
NEMP1-204ENST00000554340 TRIM6Q9C030 488 aaPredicted RBP22.72■■□□□ 1.23
NEMP1-204ENST00000554340 POLR3FQ9H1D9 316 aaPredicted RBP22.72■■□□□ 1.23
NEMP1-204ENST00000554340 LIMD1Q9UGP4 676 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms