RNA–Protein interactions for RNA: ENST00000553816.5

RDH11-205, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 1,163 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-205ENST00000553816 DNM3Q9UQ16 869 aa9.09□□□□□ -0.95
RDH11-205ENST00000553816 PIN4Q9Y237 131 aaKnown RBP9.09□□□□□ -0.95
RDH11-205ENST00000553816 USP20Q9Y2K6 914 aa9.09□□□□□ -0.95
RDH11-205ENST00000553816 PCDHB7Q9Y5E2 793 aa9.09□□□□□ -0.95
RDH11-205ENST00000553816 SRPRBQ9Y5M8 271 aaKnown RBP9.09□□□□□ -0.95
RDH11-205ENST00000553816 MRPL42Q9Y6G3 142 aaKnown RBP9.09□□□□□ -0.95
RDH11-205ENST00000553816 A0A087X0B3 334 aa9.08□□□□□ -0.96
RDH11-205ENST00000553816 NPHP3-ACAD11A0A0J9YXS1 232 aa9.08□□□□□ -0.96
RDH11-205ENST00000553816 A0A0U1RQF3 1178 aa9.08□□□□□ -0.96
RDH11-205ENST00000553816 LRRIQ4A6NIV6 560 aa9.08□□□□□ -0.96
RDH11-205ENST00000553816 INO80B-WBP1J3KQ70 363 aa9.08□□□□□ -0.96
RDH11-205ENST00000553816 B4GALT5O43286 388 aa9.08□□□□□ -0.96
RDH11-205ENST00000553816 TSPAN1O60635 241 aa9.08□□□□□ -0.96
RDH11-205ENST00000553816 HIP1RO75146 1068 aa9.08□□□□□ -0.96
RDH11-205ENST00000553816 PLA2G4BP0C869 781 aa9.08□□□□□ -0.96
RDH11-205ENST00000553816 STAG3L1P0CL83 205 aa9.08□□□□□ -0.96
RDH11-205ENST00000553816 FOSL2P15408 326 aa9.08□□□□□ -0.96
RDH11-205ENST00000553816 PLCG1P19174 1290 aa9.08□□□□□ -0.96
RDH11-205ENST00000553816 IGFBP4P22692 258 aa9.08□□□□□ -0.96
RDH11-205ENST00000553816 LONP1P36776 959 aaKnown RBP9.08□□□□□ -0.96
RDH11-205ENST00000553816 UBA7P41226 1012 aa9.08□□□□□ -0.96
RDH11-205ENST00000553816 PHKA2P46019 1235 aa9.08□□□□□ -0.96
RDH11-205ENST00000553816 POU5F1BQ06416 359 aa9.08□□□□□ -0.96
RDH11-205ENST00000553816 BTG3Q14201 252 aaPredicted RBP9.08□□□□□ -0.96
RDH11-205ENST00000553816 DHX8Q14562 1220 aaKnown RBP9.08□□□□□ -0.96
RDH11-205ENST00000553816 EPC2Q52LR7 807 aa9.08□□□□□ -0.96
RDH11-205ENST00000553816 ARSHQ5FYA8 562 aa9.08□□□□□ -0.96
RDH11-205ENST00000553816 CLLU1OSQ5K130 101 aa9.08□□□□□ -0.96
RDH11-205ENST00000553816 SMYD5Q6GMV2 418 aa9.08□□□□□ -0.96
RDH11-205ENST00000553816 TWF2Q6IBS0 349 aaKnown RBP9.08□□□□□ -0.96
RDH11-205ENST00000553816 LRRC55Q6ZSA7 311 aa9.08□□□□□ -0.96
RDH11-205ENST00000553816 TMEM192Q8IY95 271 aa9.08□□□□□ -0.96
RDH11-205ENST00000553816 FIBCD1Q8N539 461 aa9.08□□□□□ -0.96
RDH11-205ENST00000553816 SYT2Q8N9I0 419 aaPredicted RBP9.08□□□□□ -0.96
RDH11-205ENST00000553816 LINC00301Q8NCQ3 95 aa9.08□□□□□ -0.96
RDH11-205ENST00000553816 SYMPKQ92797 1274 aaKnown RBP9.08□□□□□ -0.96
RDH11-205ENST00000553816 AK8Q96MA6 479 aa9.08□□□□□ -0.96
RDH11-205ENST00000553816 CASD1Q96PB1 797 aa9.08□□□□□ -0.96
RDH11-205ENST00000553816 INO80BQ9C086 356 aaPredicted RBP9.08□□□□□ -0.96
RDH11-205ENST00000553816 CCSER1Q9C0I3 900 aa9.08□□□□□ -0.96
RDH11-205ENST00000553816 ELAC1Q9H777 363 aaKnown RBP9.08□□□□□ -0.96
RDH11-205ENST00000553816 FAM105AQ9NUU6 356 aa9.08□□□□□ -0.96
RDH11-205ENST00000553816 TMEM161AQ9NX61 479 aa9.08□□□□□ -0.96
RDH11-205ENST00000553816 DAXXQ9UER7 740 aaPredicted RBP9.08□□□□□ -0.96
RDH11-205ENST00000553816 PDCD11Q14690 1871 aaKnown RBP9.07□□□□□ -0.96
RDH11-205ENST00000553816 TBKBP1A7MCY6 615 aa9.07□□□□□ -0.96
RDH11-205ENST00000553816 BRD1O95696 1058 aa9.07□□□□□ -0.96
RDH11-205ENST00000553816 SSBP05455 408 aaKnown RBP eCLIP9.07□□□□□ -0.96
RDH11-205ENST00000553816 ARF4P18085 180 aaPredicted RBP9.07□□□□□ -0.96
RDH11-205ENST00000553816 AFF1P51825 1210 aaKnown RBP9.07□□□□□ -0.96
RDH11-205ENST00000553816 DNM1Q05193 864 aaKnown RBP9.07□□□□□ -0.96
RDH11-205ENST00000553816 TFDP1Q14186 410 aa9.07□□□□□ -0.96
RDH11-205ENST00000553816 MCM6Q14566 821 aa9.07□□□□□ -0.96
RDH11-205ENST00000553816 STK38Q15208 465 aa9.07□□□□□ -0.96
RDH11-205ENST00000553816 CCDC85BQ15834 202 aaPredicted RBP9.07□□□□□ -0.96
RDH11-205ENST00000553816 NAALADL2Q58DX5 795 aa9.07□□□□□ -0.96
RDH11-205ENST00000553816 CDCA2Q69YH5 1023 aaPredicted RBP9.07□□□□□ -0.96
RDH11-205ENST00000553816 AGMOQ6ZNB7 445 aa9.07□□□□□ -0.96
RDH11-205ENST00000553816 TAS1R3Q7RTX0 852 aa9.07□□□□□ -0.96
RDH11-205ENST00000553816 CMTR2Q8IYT2 770 aaKnown RBP9.07□□□□□ -0.96
RDH11-205ENST00000553816 RNF169Q8NCN4 708 aa9.07□□□□□ -0.96
RDH11-205ENST00000553816 SMG8Q8ND04 991 aaKnown RBP9.07□□□□□ -0.96
RDH11-205ENST00000553816 MAFAQ8NHW3 353 aaPredicted RBP9.07□□□□□ -0.96
RDH11-205ENST00000553816 HELQQ8TDG4 1101 aa9.07□□□□□ -0.96
RDH11-205ENST00000553816 CLP1Q92989 425 aaKnown RBP9.07□□□□□ -0.96
RDH11-205ENST00000553816 CDK5RAP3Q96JB5 506 aa9.07□□□□□ -0.96
RDH11-205ENST00000553816 GAS2L1Q99501 681 aaPredicted RBP9.07□□□□□ -0.96
RDH11-205ENST00000553816 TRAIPQ9BWF2 469 aa9.07□□□□□ -0.96
RDH11-205ENST00000553816 EIF2AQ9BY44 585 aaKnown RBP9.07□□□□□ -0.96
RDH11-205ENST00000553816 NFKBIZQ9BYH8 718 aa9.07□□□□□ -0.96
RDH11-205ENST00000553816 CCDC113Q9H0I3 377 aa9.07□□□□□ -0.96
RDH11-205ENST00000553816 NT5C3AQ9H0P0 336 aa9.07□□□□□ -0.96
RDH11-205ENST00000553816 FZD8Q9H461 694 aa9.07□□□□□ -0.96
RDH11-205ENST00000553816 CWH43Q9H720 699 aa9.07□□□□□ -0.96
RDH11-205ENST00000553816 CHST12Q9NRB3 414 aa9.07□□□□□ -0.96
RDH11-205ENST00000553816 MTCH2Q9Y6C9 303 aa9.07□□□□□ -0.96
RDH11-205ENST00000553816 MORC2Q9Y6X9 1032 aaPredicted RBP9.07□□□□□ -0.96
RDH11-205ENST00000553816 H3BNC9 293 aa9.06□□□□□ -0.96
RDH11-205ENST00000553816 SPTLC2O15270 562 aa9.06□□□□□ -0.96
RDH11-205ENST00000553816 ACTN4O43707 911 aaKnown RBP9.06□□□□□ -0.96
RDH11-205ENST00000553816 B4GALT3O60512 393 aa9.06□□□□□ -0.96
RDH11-205ENST00000553816 ZNF623O75123 536 aa9.06□□□□□ -0.96
RDH11-205ENST00000553816 POU3F3P20264 500 aaPredicted RBP9.06□□□□□ -0.96
RDH11-205ENST00000553816 CTNNB1P35222 781 aa9.06□□□□□ -0.96
RDH11-205ENST00000553816 BMPR1AP36894 532 aa9.06□□□□□ -0.96
RDH11-205ENST00000553816 NAMPTP43490 491 aa9.06□□□□□ -0.96
RDH11-205ENST00000553816 NPTX2P47972 431 aa9.06□□□□□ -0.96
RDH11-205ENST00000553816 PEX3P56589 373 aa9.06□□□□□ -0.96
RDH11-205ENST00000553816 FOXC1Q12948 553 aa9.06□□□□□ -0.96
RDH11-205ENST00000553816 PPM1EQ8WY54 764 aa9.06□□□□□ -0.96
RDH11-205ENST00000553816 RAD54LQ92698 747 aa9.06□□□□□ -0.96
RDH11-205ENST00000553816 CALML4Q96GE6 196 aa9.06□□□□□ -0.96
RDH11-205ENST00000553816 ZNF396Q96N95 335 aaPredicted RBP9.06□□□□□ -0.96
RDH11-205ENST00000553816 PANK2Q9BZ23 570 aa9.06□□□□□ -0.96
RDH11-205ENST00000553816 PRDM6Q9NQX0 595 aa9.06□□□□□ -0.96
RDH11-205ENST00000553816 TYW1Q9NV66 732 aaKnown RBP9.06□□□□□ -0.96
RDH11-205ENST00000553816 DACT1Q9NYF0 836 aa9.06□□□□□ -0.96
RDH11-205ENST00000553816 HES2Q9Y543 173 aa9.06□□□□□ -0.96
RDH11-205ENST00000553816 PCDHB2Q9Y5E7 798 aa9.06□□□□□ -0.96
RDH11-205ENST00000553816 CITO14578 2027 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms