RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 KCNN1Q92952 543 aa15.2■□□□□ 0.02
TUBB3-202ENST00000553656 TIGD1Q96MW7 591 aa15.2■□□□□ 0.02
TUBB3-202ENST00000553656 RAD9AQ99638 391 aa15.2■□□□□ 0.02
TUBB3-202ENST00000553656 TCHPQ9BT92 498 aa15.2■□□□□ 0.02
TUBB3-202ENST00000553656 ST6GALNAC4Q9H4F1 302 aa15.2■□□□□ 0.02
TUBB3-202ENST00000553656 PDZD7Q9H5P4 517 aa15.2■□□□□ 0.02
TUBB3-202ENST00000553656 EXOC7Q9UPT5 735 aa15.2■□□□□ 0.02
TUBB3-202ENST00000553656 PCDHB13Q9Y5F0 798 aa15.2■□□□□ 0.02
TUBB3-202ENST00000553656 HNRNPDLO14979 420 aaKnown RBP15.19■□□□□ 0.02
TUBB3-202ENST00000553656 NPTXRO95502 500 aa15.19■□□□□ 0.02
TUBB3-202ENST00000553656 MATR3P43243 847 aaKnown RBP eCLIP15.19■□□□□ 0.02
TUBB3-202ENST00000553656 FAM189BP81408 668 aa15.19■□□□□ 0.02
TUBB3-202ENST00000553656 GTF2BQ00403 316 aa15.19■□□□□ 0.02
TUBB3-202ENST00000553656 SNW1Q13573 536 aaKnown RBP15.19■□□□□ 0.02
TUBB3-202ENST00000553656 ZNF568Q3ZCX4 644 aa15.19■□□□□ 0.02
TUBB3-202ENST00000553656 NT5DC1Q5TFE4 455 aa15.19■□□□□ 0.02
TUBB3-202ENST00000553656 ZPBP2Q6X784 338 aa15.19■□□□□ 0.02
TUBB3-202ENST00000553656 TAS1R3Q7RTX0 852 aa15.19■□□□□ 0.02
TUBB3-202ENST00000553656 ZNF720Q7Z2F6 126 aa15.19■□□□□ 0.02
TUBB3-202ENST00000553656 CDR2LQ86X02 465 aaPredicted RBP15.19■□□□□ 0.02
TUBB3-202ENST00000553656 ACO2Q99798 780 aaKnown RBP15.19■□□□□ 0.02
TUBB3-202ENST00000553656 TARS2Q9BW92 718 aaKnown RBP15.19■□□□□ 0.02
TUBB3-202ENST00000553656 PBX4Q9BYU1 374 aa15.19■□□□□ 0.02
TUBB3-202ENST00000553656 ANKFY1Q9P2R3 1169 aa15.19■□□□□ 0.02
TUBB3-202ENST00000553656 TNFSF13BQ9Y275 285 aa15.19■□□□□ 0.02
TUBB3-202ENST00000553656 ZNF623O75123 536 aa15.18■□□□□ 0.02
TUBB3-202ENST00000553656 SMC2O95347 1197 aa15.18■□□□□ 0.02
TUBB3-202ENST00000553656 RPN1P04843 607 aaKnown RBP15.18■□□□□ 0.02
TUBB3-202ENST00000553656 PRR29P0C7W0 189 aa15.18■□□□□ 0.02
TUBB3-202ENST00000553656 ITGA4P13612 1032 aa15.18■□□□□ 0.02
TUBB3-202ENST00000553656 DNAJB2P25686 324 aa15.18■□□□□ 0.02
TUBB3-202ENST00000553656 ZC2HC1CQ53FD0 456 aaPredicted RBP15.18■□□□□ 0.02
TUBB3-202ENST00000553656 UBXN11Q5T124 520 aa15.18■□□□□ 0.02
TUBB3-202ENST00000553656 GLB1LQ6UWU2 654 aa15.18■□□□□ 0.02
TUBB3-202ENST00000553656 MPZL3Q6UWV2 235 aa15.18■□□□□ 0.02
TUBB3-202ENST00000553656 MAP4K3Q8IVH8 894 aa15.18■□□□□ 0.02
TUBB3-202ENST00000553656 SYCP3Q8IZU3 236 aa15.18■□□□□ 0.02
TUBB3-202ENST00000553656 TIFAQ96CG3 184 aa15.18■□□□□ 0.02
TUBB3-202ENST00000553656 ACCSQ96QU6 501 aa15.18■□□□□ 0.02
TUBB3-202ENST00000553656 FIZ1Q96SL8 496 aa15.18■□□□□ 0.02
TUBB3-202ENST00000553656 EIF2AQ9BY44 585 aaKnown RBP15.18■□□□□ 0.02
TUBB3-202ENST00000553656 UBN1Q9NPG3 1134 aa15.18■□□□□ 0.02
TUBB3-202ENST00000553656 USP20Q9Y2K6 914 aa15.18■□□□□ 0.02
TUBB3-202ENST00000553656 IPPQ9Y573 584 aa15.18■□□□□ 0.02
TUBB3-202ENST00000553656 TTC3P53804 2025 aa15.17■□□□□ 0.02
TUBB3-202ENST00000553656 TRIOBPQ9H2D6 2365 aa15.17■□□□□ 0.02
TUBB3-202ENST00000553656 TTLL13PA6NNM8 815 aa15.17■□□□□ 0.02
TUBB3-202ENST00000553656 CLDN3O15551 220 aa15.17■□□□□ 0.02
TUBB3-202ENST00000553656 TOM1L1O75674 476 aa15.17■□□□□ 0.02
TUBB3-202ENST00000553656 DGKIO75912 1065 aa15.17■□□□□ 0.02
TUBB3-202ENST00000553656 EDN1P05305 212 aa15.17■□□□□ 0.02
TUBB3-202ENST00000553656 MYBP10242 640 aa15.17■□□□□ 0.02
TUBB3-202ENST00000553656 FGFR1P11362 822 aa15.17■□□□□ 0.02
TUBB3-202ENST00000553656 HARSP12081 509 aaKnown RBP15.17■□□□□ 0.02
TUBB3-202ENST00000553656 PBX2P40425 430 aa15.17■□□□□ 0.02
TUBB3-202ENST00000553656 HTRA4P83105 476 aaPredicted RBP15.17■□□□□ 0.02
TUBB3-202ENST00000553656 DPYDQ12882 1025 aa15.17■□□□□ 0.02
TUBB3-202ENST00000553656 PSMD2Q13200 908 aa15.17■□□□□ 0.02
TUBB3-202ENST00000553656 BTG3Q14201 252 aaPredicted RBP15.17■□□□□ 0.02
TUBB3-202ENST00000553656 KMT5BQ4FZB7 885 aa15.17■□□□□ 0.02
TUBB3-202ENST00000553656 L1TD1Q5T7N2 865 aaKnown RBP15.17■□□□□ 0.02
TUBB3-202ENST00000553656 ZBTB33Q86T24 672 aa15.17■□□□□ 0.02
TUBB3-202ENST00000553656 RSPH1Q8WYR4 309 aa15.17■□□□□ 0.02
TUBB3-202ENST00000553656 HPS3Q969F9 1004 aa15.17■□□□□ 0.02
TUBB3-202ENST00000553656 APOL6Q9BWW8 343 aa15.17■□□□□ 0.02
TUBB3-202ENST00000553656 TMEM206Q9H813 350 aa15.17■□□□□ 0.02
TUBB3-202ENST00000553656 SLC28A3Q9HAS3 691 aa15.17■□□□□ 0.02
TUBB3-202ENST00000553656 RMND1Q9NWS8 449 aa15.17■□□□□ 0.02
TUBB3-202ENST00000553656 PTPRSQ13332 1948 aa15.17■□□□□ 0.02
TUBB3-202ENST00000553656 UBE4BO95155 1302 aa15.17■□□□□ 0.02
TUBB3-202ENST00000553656 TBKBP1A7MCY6 615 aa15.16■□□□□ 0.02
TUBB3-202ENST00000553656 EIF3DO15371 548 aaKnown RBP eCLIP15.16■□□□□ 0.02
TUBB3-202ENST00000553656 PPP1R37O75864 691 aa15.16■□□□□ 0.02
TUBB3-202ENST00000553656 PIGRP01833 764 aa15.16■□□□□ 0.02
TUBB3-202ENST00000553656 CA3P07451 260 aa15.16■□□□□ 0.02
TUBB3-202ENST00000553656 MCF2P10911 925 aa15.16■□□□□ 0.02
TUBB3-202ENST00000553656 MYOGP15173 224 aa15.16■□□□□ 0.02
TUBB3-202ENST00000553656 ATF7P17544 494 aaPredicted RBP15.16■□□□□ 0.02
TUBB3-202ENST00000553656 CASP5P51878 434 aa15.16■□□□□ 0.02
TUBB3-202ENST00000553656 PNOCQ13519 176 aa15.16■□□□□ 0.02
TUBB3-202ENST00000553656 NOLC1Q14978 699 aaKnown RBP eCLIP15.16■□□□□ 0.02
TUBB3-202ENST00000553656 PAN2Q504Q3 1202 aaKnown RBP15.16■□□□□ 0.02
TUBB3-202ENST00000553656 EEF1DP3Q658K8 133 aa15.16■□□□□ 0.02
TUBB3-202ENST00000553656 PPP2R2DQ66LE6 453 aa15.16■□□□□ 0.02
TUBB3-202ENST00000553656 MRPL10Q7Z7H8 261 aaKnown RBP15.16■□□□□ 0.02
TUBB3-202ENST00000553656 ZNF598Q86UK7 904 aaKnown RBP15.16■□□□□ 0.02
TUBB3-202ENST00000553656 ELOA2Q8IYF1 753 aaPredicted RBP15.16■□□□□ 0.02
TUBB3-202ENST00000553656 CMTR2Q8IYT2 770 aaKnown RBP15.16■□□□□ 0.02
TUBB3-202ENST00000553656 FIBCD1Q8N539 461 aa15.16■□□□□ 0.02
TUBB3-202ENST00000553656 URGCPQ8TCY9 931 aa15.16■□□□□ 0.02
TUBB3-202ENST00000553656 LPPQ93052 612 aa15.16■□□□□ 0.02
TUBB3-202ENST00000553656 SMARCE1Q969G3 411 aa15.16■□□□□ 0.02
TUBB3-202ENST00000553656 CCDC94Q9BW85 323 aaPredicted RBP15.16■□□□□ 0.02
TUBB3-202ENST00000553656 MRPL9Q9BYD2 267 aaKnown RBP15.16■□□□□ 0.02
TUBB3-202ENST00000553656 TMEM117Q9H0C3 514 aa15.16■□□□□ 0.02
TUBB3-202ENST00000553656 NKX2-4Q9H2Z4 354 aa15.16■□□□□ 0.02
TUBB3-202ENST00000553656 NXF3Q9H4D5 531 aaKnown RBP15.16■□□□□ 0.02
TUBB3-202ENST00000553656 RSAD1Q9HA92 442 aa15.16■□□□□ 0.02
TUBB3-202ENST00000553656 SLC39A2Q9NP94 309 aa15.16■□□□□ 0.02
TUBB3-202ENST00000553656 PARP2Q9UGN5 583 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms