RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 AIFM3Q96NN9 605 aa11.07□□□□□ -0.64
ACTN1-208ENST00000553370 TRIM6Q9C030 488 aaPredicted RBP11.07□□□□□ -0.64
ACTN1-208ENST00000553370 ZBP1Q9H171 429 aa11.07□□□□□ -0.64
ACTN1-208ENST00000553370 SFXN1Q9H9B4 322 aa11.07□□□□□ -0.64
ACTN1-208ENST00000553370 RSAD1Q9HA92 442 aa11.07□□□□□ -0.64
ACTN1-208ENST00000553370 FAM86C1Q9NVL1 165 aa11.07□□□□□ -0.64
ACTN1-208ENST00000553370 CDH22Q9UJ99 828 aa11.07□□□□□ -0.64
ACTN1-208ENST00000553370 KCNJ14Q9UNX9 436 aa11.07□□□□□ -0.64
ACTN1-208ENST00000553370 PCDHB2Q9Y5E7 798 aa11.07□□□□□ -0.64
ACTN1-208ENST00000553370 DOCK6Q96HP0 2047 aa11.07□□□□□ -0.64
ACTN1-208ENST00000553370 CNTNAP2Q9UHC6 1331 aa11.07□□□□□ -0.64
ACTN1-208ENST00000553370 VPS13AQ96RL7 3174 aa11.06□□□□□ -0.64
ACTN1-208ENST00000553370 CYP3A7-CYP3A51PA0A087WV96 503 aa11.06□□□□□ -0.64
ACTN1-208ENST00000553370 C2CD2LO14523 706 aa11.06□□□□□ -0.64
ACTN1-208ENST00000553370 SLC37A4O43826 429 aa11.06□□□□□ -0.64
ACTN1-208ENST00000553370 GAS2O43903 313 aaKnown RBP11.06□□□□□ -0.64
ACTN1-208ENST00000553370 NR1I2O75469 434 aa11.06□□□□□ -0.64
ACTN1-208ENST00000553370 CTSAP10619 480 aa11.06□□□□□ -0.64
ACTN1-208ENST00000553370 EPCAMP16422 314 aa11.06□□□□□ -0.64
ACTN1-208ENST00000553370 CYP3A7P24462 503 aa11.06□□□□□ -0.64
ACTN1-208ENST00000553370 SLC11A1P49279 550 aa11.06□□□□□ -0.64
ACTN1-208ENST00000553370 NPEPPSP55786 919 aa11.06□□□□□ -0.64
ACTN1-208ENST00000553370 TFDP1Q14186 410 aa11.06□□□□□ -0.64
ACTN1-208ENST00000553370 EMC2Q15006 297 aa11.06□□□□□ -0.64
ACTN1-208ENST00000553370 XKR9Q5GH70 373 aa11.06□□□□□ -0.64
ACTN1-208ENST00000553370 C6orf132Q5T0Z8 1188 aa11.06□□□□□ -0.64
ACTN1-208ENST00000553370 KIAA1841Q6NSI8 718 aa11.06□□□□□ -0.64
ACTN1-208ENST00000553370 TMC5Q6UXY8 1006 aa11.06□□□□□ -0.64
ACTN1-208ENST00000553370 PIK3AP1Q6ZUJ8 805 aa11.06□□□□□ -0.64
ACTN1-208ENST00000553370 CCDC149Q6ZUS6 474 aa11.06□□□□□ -0.64
ACTN1-208ENST00000553370 ANO5Q75V66 913 aa11.06□□□□□ -0.64
ACTN1-208ENST00000553370 SRGAP1Q7Z6B7 1085 aa11.06□□□□□ -0.64
ACTN1-208ENST00000553370 HACE1Q8IYU2 909 aa11.06□□□□□ -0.64
ACTN1-208ENST00000553370 WASF1Q92558 559 aa11.06□□□□□ -0.64
ACTN1-208ENST00000553370 TMEM143Q96AN5 459 aa11.06□□□□□ -0.64
ACTN1-208ENST00000553370 FAM20AQ96MK3 541 aa11.06□□□□□ -0.64
ACTN1-208ENST00000553370 MTRQ99707 1265 aa11.06□□□□□ -0.64
ACTN1-208ENST00000553370 LXNQ9BS40 222 aa11.06□□□□□ -0.64
ACTN1-208ENST00000553370 APOL6Q9BWW8 343 aa11.06□□□□□ -0.64
ACTN1-208ENST00000553370 NRDE2Q9H7Z3 1164 aa11.06□□□□□ -0.64
ACTN1-208ENST00000553370 ZSWIM6Q9HCJ5 1215 aa11.06□□□□□ -0.64
ACTN1-208ENST00000553370 SCUBE2Q9NQ36 999 aa11.06□□□□□ -0.64
ACTN1-208ENST00000553370 MRPL17Q9NRX2 175 aaKnown RBP11.06□□□□□ -0.64
ACTN1-208ENST00000553370 AGPAT5Q9NUQ2 364 aa11.06□□□□□ -0.64
ACTN1-208ENST00000553370 KANSL3Q9P2N6 904 aa11.06□□□□□ -0.64
ACTN1-208ENST00000553370 DNAJB4Q9UDY4 337 aa11.06□□□□□ -0.64
ACTN1-208ENST00000553370 FBXL21Q9UKT6 434 aa11.06□□□□□ -0.64
ACTN1-208ENST00000553370 FAN1Q9Y2M0 1017 aa11.06□□□□□ -0.64
ACTN1-208ENST00000553370 PPME1Q9Y570 386 aa11.06□□□□□ -0.64
ACTN1-208ENST00000553370 MYH15Q9Y2K3 1946 aa11.05□□□□□ -0.64
ACTN1-208ENST00000553370 IGKV6-21A0A0C4DH24 114 aa11.05□□□□□ -0.64
ACTN1-208ENST00000553370 INO80B-WBP1J3KQ70 363 aa11.05□□□□□ -0.64
ACTN1-208ENST00000553370 CITO14578 2027 aa11.05□□□□□ -0.64
ACTN1-208ENST00000553370 GFRA3O60609 400 aa11.05□□□□□ -0.64
ACTN1-208ENST00000553370 POMCP01189 267 aa11.05□□□□□ -0.64
ACTN1-208ENST00000553370 NEFLP07196 543 aa11.05□□□□□ -0.64
ACTN1-208ENST00000553370 P4HBP07237 508 aaKnown RBP11.05□□□□□ -0.64
ACTN1-208ENST00000553370 ASGR2P07307 311 aa11.05□□□□□ -0.64
ACTN1-208ENST00000553370 GALTP07902 379 aa11.05□□□□□ -0.64
ACTN1-208ENST00000553370 ITGA4P13612 1032 aa11.05□□□□□ -0.64
ACTN1-208ENST00000553370 AVPR2P30518 371 aa11.05□□□□□ -0.64
ACTN1-208ENST00000553370 YWHABP31946 246 aaKnown RBP11.05□□□□□ -0.64
ACTN1-208ENST00000553370 OR1G1P47890 313 aa11.05□□□□□ -0.64
ACTN1-208ENST00000553370 FOSBP53539 338 aa11.05□□□□□ -0.64
ACTN1-208ENST00000553370 AK2P54819 239 aa11.05□□□□□ -0.64
ACTN1-208ENST00000553370 EVCP57679 992 aa11.05□□□□□ -0.64
ACTN1-208ENST00000553370 CYP4A11Q02928 519 aa11.05□□□□□ -0.64
ACTN1-208ENST00000553370 LAMTOR4Q0VGL1 99 aa11.05□□□□□ -0.64
ACTN1-208ENST00000553370 PPP2R5CQ13362 524 aa11.05□□□□□ -0.64
ACTN1-208ENST00000553370 KCNC3Q14003 757 aa11.05□□□□□ -0.64
ACTN1-208ENST00000553370 PPP4R3AQ6IN85 833 aa11.05□□□□□ -0.64
ACTN1-208ENST00000553370 USP34Q70CQ2 3546 aa11.05□□□□□ -0.64
ACTN1-208ENST00000553370 OTOP3Q7RTS5 596 aa11.05□□□□□ -0.64
ACTN1-208ENST00000553370 TMEM173Q86WV6 379 aaPredicted RBP11.05□□□□□ -0.64
ACTN1-208ENST00000553370 SLFN12Q8IYM2 578 aa11.05□□□□□ -0.64
ACTN1-208ENST00000553370 RNF149Q8NC42 400 aa11.05□□□□□ -0.64
ACTN1-208ENST00000553370 PRPF31Q8WWY3 499 aaKnown RBP11.05□□□□□ -0.64
ACTN1-208ENST00000553370 ASIC4Q96FT7 647 aa11.05□□□□□ -0.64
ACTN1-208ENST00000553370 TRAIPQ9BWF2 469 aa11.05□□□□□ -0.64
ACTN1-208ENST00000553370 LIMD1Q9UGP4 676 aa11.05□□□□□ -0.64
ACTN1-208ENST00000553370 PRG3Q9Y2Y8 225 aaPredicted RBP11.05□□□□□ -0.64
ACTN1-208ENST00000553370 ADGRG1Q9Y653 693 aa11.05□□□□□ -0.64
ACTN1-208ENST00000553370 MEIS3P2A8K0S8 358 aa11.04□□□□□ -0.64
ACTN1-208ENST00000553370 EML1O00423 815 aa11.04□□□□□ -0.64
ACTN1-208ENST00000553370 ST18O60284 1047 aa11.04□□□□□ -0.64
ACTN1-208ENST00000553370 OFD1O75665 1012 aa11.04□□□□□ -0.64
ACTN1-208ENST00000553370 BRD1O95696 1058 aa11.04□□□□□ -0.64
ACTN1-208ENST00000553370 PDGFBP01127 241 aaPredicted RBP11.04□□□□□ -0.64
ACTN1-208ENST00000553370 ALDH2P05091 517 aa11.04□□□□□ -0.64
ACTN1-208ENST00000553370 ADH1AP07327 375 aa11.04□□□□□ -0.64
ACTN1-208ENST00000553370 TRIM29Q14134 588 aa11.04□□□□□ -0.64
ACTN1-208ENST00000553370 PTPN14Q15678 1187 aa11.04□□□□□ -0.64
ACTN1-208ENST00000553370 NOTUMQ6P988 496 aa11.04□□□□□ -0.64
ACTN1-208ENST00000553370 TPH2Q8IWU9 490 aa11.04□□□□□ -0.64
ACTN1-208ENST00000553370 CNNM3Q8NE01 707 aa11.04□□□□□ -0.64
ACTN1-208ENST00000553370 FLCNQ8NFG4 579 aa11.04□□□□□ -0.64
ACTN1-208ENST00000553370 TMEM175Q9BSA9 504 aa11.04□□□□□ -0.64
ACTN1-208ENST00000553370 TM6SF1Q9BZW5 370 aa11.04□□□□□ -0.64
ACTN1-208ENST00000553370 ZSWIM4Q9H7M6 989 aa11.04□□□□□ -0.64
ACTN1-208ENST00000553370 UBN1Q9NPG3 1134 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms