RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 SSU72P8A0A1W2PR75 194 aa6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 TLDC2A0PJX2 215 aa6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 A6NNZ2 444 aa6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 PP2D1A8MPX8 630 aa6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 SHISA8B8ZZ34 492 aa6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 KCNQ2O43526 872 aa6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 GRIN3BO60391 1043 aa6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 ATE1O95260 518 aa6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 ECEL1O95672 775 aa6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 GNA14O95837 355 aa6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 ATP1A1P05023 1023 aaKnown RBP6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 NID1P14543 1247 aa6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 TCP1P17987 556 aaKnown RBP6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 CD68P34810 354 aaPredicted RBP6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 TECP42680 631 aa6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 CDK8P49336 464 aa6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 SLC20A2Q08357 652 aa6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 CALCRLQ16602 461 aa6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 LETM2Q2VYF4 491 aa6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 TUBB8Q3ZCM7 444 aa6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 GLE1Q53GS7 698 aaKnown RBP6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 ASPRV1Q53RT3 343 aa6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 MIIPQ5JXC2 388 aa6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 NCAPH2Q6IBW4 605 aa6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 NOA1Q8NC60 698 aaKnown RBP6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 NEK11Q8NG66 645 aa6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 CAGE1Q8TC20 777 aa6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 TBC1D22AQ8WUA7 517 aa6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 SYN2Q92777 582 aaPredicted RBP6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 PLPPR2Q96GM1 343 aa6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 CDK5RAP3Q96JB5 506 aa6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 ALS2CR12Q96Q35 445 aa6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 MMS19Q96T76 1030 aa6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 MMTAG2Q9BU76 263 aaKnown RBP6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 RTFDC1Q9BY42 306 aaPredicted RBP6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 GLT8D2Q9H1C3 349 aa6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 NDST4Q9H3R1 872 aa6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 SEMA6BQ9H3T3 888 aa6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 LUC7LQ9NQ29 371 aaKnown RBP6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 AGPAT5Q9NUQ2 364 aa6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 VPS18Q9P253 973 aa6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 LRWD1Q9UFC0 647 aa6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 SNX12Q9UMY4 172 aa6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 STX8Q9UNK0 236 aa6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 POLR3KQ9Y2Y1 108 aaPredicted RBP6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 PCDHA13Q9Y5I0 950 aa6.59□□□□□ -1.35
CHMP4A-210ENST00000552620 COL5A3P25940 1745 aaPredicted RBP6.59□□□□□ -1.36
CHMP4A-210ENST00000552620 COL4A1P02462 1669 aa6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 MYH13Q9UKX3 1938 aa6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 LOC100289279A0A1B0GTE1 492 aa6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 LRRIQ3A6PVS8 624 aaPredicted RBP6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 GFRA2O00451 464 aa6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 CELA2BP08218 269 aaPredicted RBP6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 IDEP14735 1019 aa6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 IL1R1P14778 569 aa6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 GCFC2P16383 781 aaKnown RBP6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 CAPN2P17655 700 aa6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 PAFAH1B1P43034 410 aa6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 BTDP43251 543 aa6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 MAGEA1P43355 309 aa6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 ADCY7P51828 1080 aa6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 GRB10Q13322 594 aa6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 TMEM119Q4V9L6 283 aa6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 TRAPPC3LQ5T215 181 aa6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 KRT79Q5XKE5 535 aa6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 ALS2CLQ60I27 953 aa6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 PPP4R3AQ6IN85 833 aa6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 LRFN4Q6PJG9 635 aa6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 TXNRD3Q86VQ6 643 aa6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 LSRQ86X29 649 aaPredicted RBP6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 DHX37Q8IY37 1157 aaKnown RBP6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 TEX11Q8IYF3 940 aa6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 KIAA0895Q8NCT3 520 aa6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 TBCKQ8TEA7 893 aa6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 COG1Q8WTW3 980 aa6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 LARP4BQ92615 738 aaKnown RBP6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 RAD54LQ92698 747 aa6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 SRPK1Q96SB4 655 aaKnown RBP6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 PLIN2Q99541 437 aa6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 CRACR2AQ9BSW2 395 aa6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 DEF6Q9H4E7 631 aa6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 SH2D4AQ9H788 454 aa6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 CD209Q9NNX6 404 aa6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 ENAMQ9NRM1 1142 aa6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 RAD18Q9NS91 495 aa6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 BLOC1S4Q9NUP1 217 aa6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 HDAC6Q9UBN7 1215 aa6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 TRIM10Q9UDY6 481 aa6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 FAM184BQ9ULE4 1060 aa6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 HPCAL4Q9UM19 191 aa6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 SIK3Q9Y2K2 1263 aa6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 FAN1Q9Y2M0 1017 aa6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 SUGT1Q9Y2Z0 365 aa6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 BAZ2BQ9UIF8 2168 aaKnown RBP6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 ROBO1Q9Y6N7 1651 aa6.58□□□□□ -1.36
CHMP4A-210ENST00000552620 MYO3BQ8WXR4 1341 aa6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 NRAPQ86VF7 1730 aa6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 A0A0U1RQG5 324 aaPredicted RBP6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 MYMKA6NI61 221 aa6.57□□□□□ -1.36
CHMP4A-210ENST00000552620 GOLGA8KD6RF30 607 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms