RNA–Protein interactions for RNA: ENST00000552422.5

CNOT2-238, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 3

Gene CNOT2, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-238	ENST00000552422	NKRF	O15226	690 aa	Known RBP eCLIP	7.58	□□□□□ -1.2	2e-7	■■□□□ 14
CNOT2-238	ENST00000552422	ARIH2	O95376	493 aa		7.58	□□□□□ -1.2
CNOT2-238	ENST00000552422	FOS	P01100	380 aa	Predicted RBP	7.58	□□□□□ -1.2
CNOT2-238	ENST00000552422	C6orf222	P0C671	652 aa	Predicted RBP	7.58	□□□□□ -1.2
CNOT2-238	ENST00000552422	MYCL	P12524	364 aa	Predicted RBP	7.58	□□□□□ -1.2
CNOT2-238	ENST00000552422	FDPS	P14324	419 aa	Known RBP	7.58	□□□□□ -1.2
CNOT2-238	ENST00000552422	PTGS1	P23219	599 aa		7.58	□□□□□ -1.2
CNOT2-238	ENST00000552422	GNA11	P29992	359 aa		7.58	□□□□□ -1.2
CNOT2-238	ENST00000552422	SREBF1	P36956	1147 aa		7.58	□□□□□ -1.2
CNOT2-238	ENST00000552422	PLCB3	Q01970	1234 aa		7.58	□□□□□ -1.2
CNOT2-238	ENST00000552422	TTLL4	Q14679	1199 aa		7.58	□□□□□ -1.2
CNOT2-238	ENST00000552422	FSCN1	Q16658	493 aa	Known RBP	7.58	□□□□□ -1.2
CNOT2-238	ENST00000552422	TMEM63B	Q5T3F8	832 aa		7.58	□□□□□ -1.2
CNOT2-238	ENST00000552422	GJC2	Q5T442	439 aa	Predicted RBP	7.58	□□□□□ -1.2
CNOT2-238	ENST00000552422	CCSAP	Q6IQ19	270 aa	Predicted RBP	7.58	□□□□□ -1.2
CNOT2-238	ENST00000552422	XRRA1	Q6P2D8	792 aa		7.58	□□□□□ -1.2
CNOT2-238	ENST00000552422	SEPT14	Q6ZU15	432 aa		7.58	□□□□□ -1.2
CNOT2-238	ENST00000552422	NECAB2	Q7Z6G3	386 aa		7.58	□□□□□ -1.2
CNOT2-238	ENST00000552422	RNF180	Q86T96	592 aa		7.58	□□□□□ -1.2
CNOT2-238	ENST00000552422	NSUN7	Q8NE18	718 aa	Known RBP	7.58	□□□□□ -1.2
CNOT2-238	ENST00000552422	GLIS3	Q8NEA6	775 aa		7.58	□□□□□ -1.2
CNOT2-238	ENST00000552422	KLHDC9	Q8NEP7	349 aa		7.58	□□□□□ -1.2
CNOT2-238	ENST00000552422	CRYGN	Q8WXF5	182 aa		7.58	□□□□□ -1.2
CNOT2-238	ENST00000552422	AIFM3	Q96NN9	605 aa		7.58	□□□□□ -1.2
CNOT2-238	ENST00000552422	INPP4A	Q96PE3	977 aa	Predicted RBP	7.58	□□□□□ -1.2
CNOT2-238	ENST00000552422	OSBPL1A	Q9BXW6	950 aa		7.58	□□□□□ -1.2
CNOT2-238	ENST00000552422	C6orf50	Q9HD87	102 aa		7.58	□□□□□ -1.2
CNOT2-238	ENST00000552422		Q9Y3F1	56 aa		7.58	□□□□□ -1.2
CNOT2-238	ENST00000552422	SCN5A	Q14524	2016 aa		7.57	□□□□□ -1.2
CNOT2-238	ENST00000552422	CDH23	Q9H251	3354 aa		7.57	□□□□□ -1.2
CNOT2-238	ENST00000552422		A0A1W2PQ45	241 aa	Predicted RBP	7.57	□□□□□ -1.2
CNOT2-238	ENST00000552422		A0A1W2PQY0	241 aa		7.57	□□□□□ -1.2
CNOT2-238	ENST00000552422	ADAMTS3	O15072	1205 aa		7.57	□□□□□ -1.2
CNOT2-238	ENST00000552422	TXN	P10599	105 aa	Known RBP	7.57	□□□□□ -1.2
CNOT2-238	ENST00000552422	TGFB3	P10600	412 aa		7.57	□□□□□ -1.2
CNOT2-238	ENST00000552422	FAAP100	Q0VG06	881 aa		7.57	□□□□□ -1.2
CNOT2-238	ENST00000552422	NPY5R	Q15761	445 aa		7.57	□□□□□ -1.2
CNOT2-238	ENST00000552422	GNPTAB	Q3T906	1256 aa		7.57	□□□□□ -1.2
CNOT2-238	ENST00000552422	MCTP2	Q6DN12	878 aa		7.57	□□□□□ -1.2
CNOT2-238	ENST00000552422	GALNT17	Q6IS24	598 aa		7.57	□□□□□ -1.2
CNOT2-238	ENST00000552422	KCNV1	Q6PIU1	500 aa		7.57	□□□□□ -1.2
CNOT2-238	ENST00000552422	CCDC83	Q8IWF9	413 aa		7.57	□□□□□ -1.2
CNOT2-238	ENST00000552422	PCSK9	Q8NBP7	692 aa	Known RBP	7.57	□□□□□ -1.2
CNOT2-238	ENST00000552422	DAGLB	Q8NCG7	672 aa		7.57	□□□□□ -1.2
CNOT2-238	ENST00000552422	BICD2	Q8TD16	824 aa		7.57	□□□□□ -1.2
CNOT2-238	ENST00000552422	EZH1	Q92800	747 aa	Predicted RBP	7.57	□□□□□ -1.2
CNOT2-238	ENST00000552422	ZSCAN31	Q96LW9	406 aa	Predicted RBP	7.57	□□□□□ -1.2
CNOT2-238	ENST00000552422	LLPH	Q9BRT6	129 aa	Known RBP	7.57	□□□□□ -1.2
CNOT2-238	ENST00000552422	ANO3	Q9BYT9	981 aa		7.57	□□□□□ -1.2
CNOT2-238	ENST00000552422	C11orf49	Q9H6J7	331 aa		7.57	□□□□□ -1.2
CNOT2-238	ENST00000552422	EHMT1	Q9H9B1	1298 aa		7.57	□□□□□ -1.2
CNOT2-238	ENST00000552422	SPC25	Q9HBM1	224 aa		7.57	□□□□□ -1.2
CNOT2-238	ENST00000552422	ORC3	Q9UBD5	711 aa	Predicted RBP	7.57	□□□□□ -1.2
CNOT2-238	ENST00000552422	GPN3	Q9UHW5	284 aa	Predicted RBP	7.57	□□□□□ -1.2
CNOT2-238	ENST00000552422	DDX41	Q9UJV9	622 aa	Known RBP	7.57	□□□□□ -1.2
CNOT2-238	ENST00000552422	PCDHA6	Q9UN73	950 aa		7.57	□□□□□ -1.2
CNOT2-238	ENST00000552422	PCDHA4	Q9UN74	947 aa		7.57	□□□□□ -1.2
CNOT2-238	ENST00000552422	PCDHA8	Q9Y5H6	950 aa		7.57	□□□□□ -1.2
CNOT2-238	ENST00000552422	MRVI1	Q9Y6F6	885 aa		7.57	□□□□□ -1.2
CNOT2-238	ENST00000552422	SI	P14410	1827 aa		7.57	□□□□□ -1.2
CNOT2-238	ENST00000552422	TET1	Q8NFU7	2136 aa		7.57	□□□□□ -1.2
CNOT2-238	ENST00000552422	TREH	O43280	583 aa		7.56	□□□□□ -1.2
CNOT2-238	ENST00000552422	FIBP	O43427	364 aa		7.56	□□□□□ -1.2
CNOT2-238	ENST00000552422	JAK2	O60674	1132 aa		7.56	□□□□□ -1.2
CNOT2-238	ENST00000552422	DTNB	O60941	627 aa		7.56	□□□□□ -1.2
CNOT2-238	ENST00000552422	F13B	P05160	661 aa		7.56	□□□□□ -1.2
CNOT2-238	ENST00000552422	ASGR1	P07306	291 aa		7.56	□□□□□ -1.2
CNOT2-238	ENST00000552422	XBP1	P17861	261 aa		7.56	□□□□□ -1.2
CNOT2-238	ENST00000552422	ITGB5	P18084	799 aa		7.56	□□□□□ -1.2
CNOT2-238	ENST00000552422	UBA1	P22314	1058 aa	Known RBP	7.56	□□□□□ -1.2
CNOT2-238	ENST00000552422	ICAM3	P32942	547 aa		7.56	□□□□□ -1.2
CNOT2-238	ENST00000552422	ASPA	P45381	313 aa		7.56	□□□□□ -1.2
CNOT2-238	ENST00000552422	MCM2	P49736	904 aa		7.56	□□□□□ -1.2
CNOT2-238	ENST00000552422	CPT1A	P50416	773 aa		7.56	□□□□□ -1.2
CNOT2-238	ENST00000552422	ACLY	P53396	1101 aa		7.56	□□□□□ -1.2
CNOT2-238	ENST00000552422	ARHGAP1	Q07960	439 aa		7.56	□□□□□ -1.2
CNOT2-238	ENST00000552422	MAP7	Q14244	749 aa		7.56	□□□□□ -1.2
CNOT2-238	ENST00000552422	DSC3	Q14574	896 aa		7.56	□□□□□ -1.2
CNOT2-238	ENST00000552422	SNX17	Q15036	470 aa		7.56	□□□□□ -1.2
CNOT2-238	ENST00000552422	KCNA10	Q16322	511 aa		7.56	□□□□□ -1.2
CNOT2-238	ENST00000552422	LY6K	Q17RY6	165 aa		7.56	□□□□□ -1.2
CNOT2-238	ENST00000552422	JAKMIP3	Q5VZ66	844 aa		7.56	□□□□□ -1.2
CNOT2-238	ENST00000552422	RASGRP4	Q8TDF6	673 aa		7.56	□□□□□ -1.2
CNOT2-238	ENST00000552422	WASF1	Q92558	559 aa		7.56	□□□□□ -1.2
CNOT2-238	ENST00000552422	COPS5	Q92905	334 aa		7.56	□□□□□ -1.2
CNOT2-238	ENST00000552422	GPRASP2	Q96D09	838 aa		7.56	□□□□□ -1.2
CNOT2-238	ENST00000552422	PGBD1	Q96JS3	809 aa		7.56	□□□□□ -1.2
CNOT2-238	ENST00000552422	ALG1	Q9BT22	464 aa		7.56	□□□□□ -1.2
CNOT2-238	ENST00000552422	HTATIP2	Q9BUP3	242 aa		7.56	□□□□□ -1.2
CNOT2-238	ENST00000552422	PHF20	Q9BVI0	1012 aa		7.56	□□□□□ -1.2
CNOT2-238	ENST00000552422	BCO2	Q9BYV7	579 aa		7.56	□□□□□ -1.2
CNOT2-238	ENST00000552422	SENP6	Q9GZR1	1112 aa	Predicted RBP	7.56	□□□□□ -1.2
CNOT2-238	ENST00000552422	AP5M1	Q9H0R1	490 aa		7.56	□□□□□ -1.2
CNOT2-238	ENST00000552422	FAM105A	Q9NUU6	356 aa		7.56	□□□□□ -1.2
CNOT2-238	ENST00000552422	TMEM260	Q9NX78	707 aa		7.56	□□□□□ -1.2
CNOT2-238	ENST00000552422	TCHH	Q07283	1943 aa		7.56	□□□□□ -1.2
CNOT2-238	ENST00000552422	DYNC1LI2	O43237	492 aa	Predicted RBP	7.55	□□□□□ -1.2
CNOT2-238	ENST00000552422	GH1	P01241	217 aa		7.55	□□□□□ -1.2
CNOT2-238	ENST00000552422	NFIC	P08651	508 aa		7.55	□□□□□ -1.2
CNOT2-238	ENST00000552422	CYP3A4	P08684	503 aa		7.55	□□□□□ -1.2

Retrieved 100 of 20,778 RNA–protein pairs in 17 ms