RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 DHX33Q9H6R0 707 aaKnown RBP18.25■□□□□ 0.51
RAB5C-209ENST00000552162 TBC1D17Q9HA65 648 aa18.25■□□□□ 0.51
RAB5C-209ENST00000552162 BMP2KQ9NSY1 1161 aaPredicted RBP18.25■□□□□ 0.51
RAB5C-209ENST00000552162 DDX25Q9UHL0 483 aaKnown RBP18.25■□□□□ 0.51
RAB5C-209ENST00000552162 MTCL1Q9Y4B5 1905 aaKnown RBP18.24■□□□□ 0.51
RAB5C-209ENST00000552162 SLC37A4O43826 429 aa18.24■□□□□ 0.51
RAB5C-209ENST00000552162 EFEMP2O95967 443 aa18.24■□□□□ 0.51
RAB5C-209ENST00000552162 LMNAP02545 664 aaKnown RBP18.24■□□□□ 0.51
RAB5C-209ENST00000552162 SRFP11831 508 aa18.24■□□□□ 0.51
RAB5C-209ENST00000552162 ITGA4P13612 1032 aa18.24■□□□□ 0.51
RAB5C-209ENST00000552162 HSPA4P34932 840 aa18.24■□□□□ 0.51
RAB5C-209ENST00000552162 RFC5P40937 340 aa18.24■□□□□ 0.51
RAB5C-209ENST00000552162 LAMTOR4Q0VGL1 99 aa18.24■□□□□ 0.51
RAB5C-209ENST00000552162 PPP2R5CQ13362 524 aa18.24■□□□□ 0.51
RAB5C-209ENST00000552162 EXOC8Q8IYI6 725 aa18.24■□□□□ 0.51
RAB5C-209ENST00000552162 SLC44A3Q8N4M1 653 aa18.24■□□□□ 0.51
RAB5C-209ENST00000552162 DAGLBQ8NCG7 672 aa18.24■□□□□ 0.51
RAB5C-209ENST00000552162 CNNM3Q8NE01 707 aa18.24■□□□□ 0.51
RAB5C-209ENST00000552162 SEMA4AQ9H3S1 761 aa18.24■□□□□ 0.51
RAB5C-209ENST00000552162 UBN1Q9NPG3 1134 aa18.24■□□□□ 0.51
RAB5C-209ENST00000552162 WRAP73Q9P2S5 460 aaPredicted RBP18.24■□□□□ 0.51
RAB5C-209ENST00000552162 VAV3Q9UKW4 847 aa18.24■□□□□ 0.51
RAB5C-209ENST00000552162 PPME1Q9Y570 386 aa18.24■□□□□ 0.51
RAB5C-209ENST00000552162 IPPQ9Y573 584 aa18.24■□□□□ 0.51
RAB5C-209ENST00000552162 ARL5CA6NH57 179 aa18.23■□□□□ 0.51
RAB5C-209ENST00000552162 DKC1O60832 514 aaKnown RBP eCLIP18.23■□□□□ 0.51
RAB5C-209ENST00000552162 ERLIN2O94905 339 aa18.23■□□□□ 0.51
RAB5C-209ENST00000552162 MLH1P40692 756 aa18.23■□□□□ 0.51
RAB5C-209ENST00000552162 DSG1Q02413 1049 aa18.23■□□□□ 0.51
RAB5C-209ENST00000552162 DSC1Q08554 894 aa18.23■□□□□ 0.51
RAB5C-209ENST00000552162 SSRP1Q08945 709 aaKnown RBP18.23■□□□□ 0.51
RAB5C-209ENST00000552162 NPY5RQ15761 445 aa18.23■□□□□ 0.51
RAB5C-209ENST00000552162 KIAA0319Q5VV43 1072 aa18.23■□□□□ 0.51
RAB5C-209ENST00000552162 RNF149Q8NC42 400 aa18.23■□□□□ 0.51
RAB5C-209ENST00000552162 RIN2Q8WYP3 895 aaPredicted RBP18.23■□□□□ 0.51
RAB5C-209ENST00000552162 NXPE3Q969Y0 559 aa18.23■□□□□ 0.51
RAB5C-209ENST00000552162 ZNF707Q96C28 371 aaPredicted RBP18.23■□□□□ 0.51
RAB5C-209ENST00000552162 GAD1Q99259 594 aa18.23■□□□□ 0.51
RAB5C-209ENST00000552162 EIF2AQ9BY44 585 aaKnown RBP18.23■□□□□ 0.51
RAB5C-209ENST00000552162 SLKQ9H2G2 1235 aaPredicted RBP18.23■□□□□ 0.51
RAB5C-209ENST00000552162 RXFP1Q9HBX9 757 aa18.23■□□□□ 0.51
RAB5C-209ENST00000552162 R4GN57 208 aa18.23■□□□□ 0.51
RAB5C-209ENST00000552162 F8W810 466 aa18.22■□□□□ 0.51
RAB5C-209ENST00000552162 P4HBP07237 508 aaKnown RBP18.22■□□□□ 0.51
RAB5C-209ENST00000552162 SPATA31D3P0C874 917 aa18.22■□□□□ 0.51
RAB5C-209ENST00000552162 SCNN1GP51170 649 aa18.22■□□□□ 0.51
RAB5C-209ENST00000552162 EVCP57679 992 aa18.22■□□□□ 0.51
RAB5C-209ENST00000552162 EMC2Q15006 297 aa18.22■□□□□ 0.51
RAB5C-209ENST00000552162 INF2Q27J81 1249 aa18.22■□□□□ 0.51
RAB5C-209ENST00000552162 SPECC1Q5M775 1068 aa18.22■□□□□ 0.51
RAB5C-209ENST00000552162 SPATA31D4Q6ZUB0 917 aa18.22■□□□□ 0.51
RAB5C-209ENST00000552162 GET4Q7L5D6 327 aaPredicted RBP18.22■□□□□ 0.51
RAB5C-209ENST00000552162 GPR152Q8TDT2 470 aa18.22■□□□□ 0.51
RAB5C-209ENST00000552162 HDAC7Q8WUI4 952 aa18.22■□□□□ 0.51
RAB5C-209ENST00000552162 TCP11Q8WWU5 503 aa18.22■□□□□ 0.51
RAB5C-209ENST00000552162 ZFP42Q96MM3 310 aa18.22■□□□□ 0.51
RAB5C-209ENST00000552162 PIDD1Q9HB75 910 aa18.22■□□□□ 0.51
RAB5C-209ENST00000552162 FANCMQ8IYD8 2048 aa18.22■□□□□ 0.51
RAB5C-209ENST00000552162 GAS2O43903 313 aaKnown RBP18.21■□□□□ 0.51
RAB5C-209ENST00000552162 TSPAN1O60635 241 aa18.21■□□□□ 0.51
RAB5C-209ENST00000552162 DEXIO95424 95 aa18.21■□□□□ 0.51
RAB5C-209ENST00000552162 PAPLNO95428 1278 aa18.21■□□□□ 0.51
RAB5C-209ENST00000552162 YWHABP31946 246 aaKnown RBP18.21■□□□□ 0.51
RAB5C-209ENST00000552162 NOTUMQ6P988 496 aa18.21■□□□□ 0.51
RAB5C-209ENST00000552162 KRT25Q7Z3Z0 450 aa18.21■□□□□ 0.51
RAB5C-209ENST00000552162 FERMT3Q86UX7 667 aa18.21■□□□□ 0.51
RAB5C-209ENST00000552162 PALB2Q86YC2 1186 aa18.21■□□□□ 0.51
RAB5C-209ENST00000552162 RMDN1Q96DB5 314 aa18.21■□□□□ 0.51
RAB5C-209ENST00000552162 B3GALT6Q96L58 329 aa18.21■□□□□ 0.51
RAB5C-209ENST00000552162 LXNQ9BS40 222 aa18.21■□□□□ 0.51
RAB5C-209ENST00000552162 RNF39Q9H2S5 420 aa18.21■□□□□ 0.51
RAB5C-209ENST00000552162 PLEKHA4Q9H4M7 779 aa18.21■□□□□ 0.51
RAB5C-209ENST00000552162 KCNMB3Q9NPA1 279 aa18.21■□□□□ 0.51
RAB5C-209ENST00000552162 ARHGEF3Q9NR81 526 aa18.21■□□□□ 0.51
RAB5C-209ENST00000552162 ZDHHC7Q9NXF8 308 aa18.21■□□□□ 0.51
RAB5C-209ENST00000552162 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.21■□□□□ 0.51
RAB5C-209ENST00000552162 HES2Q9Y543 173 aa18.21■□□□□ 0.51
RAB5C-209ENST00000552162 DNAH14Q0VDD8 3507 aa18.2■□□□□ 0.5
RAB5C-209ENST00000552162 ASAP2O43150 1006 aa18.2■□□□□ 0.5
RAB5C-209ENST00000552162 TGM5O43548 720 aa18.2■□□□□ 0.5
RAB5C-209ENST00000552162 NR1I2O75469 434 aa18.2■□□□□ 0.5
RAB5C-209ENST00000552162 DCNP07585 359 aaKnown RBP18.2■□□□□ 0.5
RAB5C-209ENST00000552162 LAMP2P13473 410 aa18.2■□□□□ 0.5
RAB5C-209ENST00000552162 PSMA5P28066 241 aa18.2■□□□□ 0.5
RAB5C-209ENST00000552162 PCBP1Q15365 356 aaKnown RBP eCLIP18.2■□□□□ 0.5
RAB5C-209ENST00000552162 GALNT17Q6IS24 598 aa18.2■□□□□ 0.5
RAB5C-209ENST00000552162 PHLDB3Q6NSJ2 640 aa18.2■□□□□ 0.5
RAB5C-209ENST00000552162 ZC3H14Q6PJT7 736 aaKnown RBP18.2■□□□□ 0.5
RAB5C-209ENST00000552162 GLYCTKQ8IVS8 523 aa18.2■□□□□ 0.5
RAB5C-209ENST00000552162 C4orf19Q8IY42 314 aa18.2■□□□□ 0.5
RAB5C-209ENST00000552162 KIAA2013Q8IYS2 634 aa18.2■□□□□ 0.5
RAB5C-209ENST00000552162 CCDC51Q96ER9 411 aa18.2■□□□□ 0.5
RAB5C-209ENST00000552162 CPB2Q96IY4 423 aa18.2■□□□□ 0.5
RAB5C-209ENST00000552162 FAM20AQ96MK3 541 aa18.2■□□□□ 0.5
RAB5C-209ENST00000552162 AIFM3Q96NN9 605 aa18.2■□□□□ 0.5
RAB5C-209ENST00000552162 APOL6Q9BWW8 343 aa18.2■□□□□ 0.5
RAB5C-209ENST00000552162 NT5C3AQ9H0P0 336 aa18.2■□□□□ 0.5
RAB5C-209ENST00000552162 CHST7Q9NS84 486 aa18.2■□□□□ 0.5
RAB5C-209ENST00000552162 MIOSQ9NXC5 875 aa18.2■□□□□ 0.5
RAB5C-209ENST00000552162 CPLX1O14810 134 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms