RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 PIK3C3Q8NEB9 887 aa4.65□□□□□ -1.67
SCAF11-215ENST00000551391 GCDHQ92947 438 aaPredicted RBP4.65□□□□□ -1.67
SCAF11-215ENST00000551391 UIMC1Q96RL1 719 aa4.65□□□□□ -1.67
SCAF11-215ENST00000551391 ACE2Q9BYF1 805 aaPredicted RBP4.65□□□□□ -1.67
SCAF11-215ENST00000551391 ZNF341Q9BYN7 854 aa4.65□□□□□ -1.67
SCAF11-215ENST00000551391 GREM2Q9H772 168 aa4.65□□□□□ -1.67
SCAF11-215ENST00000551391 C14orf93Q9H972 538 aaKnown RBP4.65□□□□□ -1.67
SCAF11-215ENST00000551391 CD248Q9HCU0 757 aa4.65□□□□□ -1.67
SCAF11-215ENST00000551391 FAM184BQ9ULE4 1060 aa4.65□□□□□ -1.67
SCAF11-215ENST00000551391 THRAP3Q9Y2W1 955 aaKnown RBP4.65□□□□□ -1.67
SCAF11-215ENST00000551391 ZNF623O75123 536 aa4.64□□□□□ -1.67
SCAF11-215ENST00000551391 SNUPNO95149 360 aaKnown RBP4.64□□□□□ -1.67
SCAF11-215ENST00000551391 JUNP05412 331 aaKnown RBP4.64□□□□□ -1.67
SCAF11-215ENST00000551391 HMGB1P09429 215 aaKnown RBP4.64□□□□□ -1.67
SCAF11-215ENST00000551391 VSIG10L2P0DP72 767 aa4.64□□□□□ -1.67
SCAF11-215ENST00000551391 OSMP13725 252 aa4.64□□□□□ -1.67
SCAF11-215ENST00000551391 WASP42768 502 aa4.64□□□□□ -1.67
SCAF11-215ENST00000551391 RAC3P60763 192 aa4.64□□□□□ -1.67
SCAF11-215ENST00000551391 CDK17Q00537 523 aa4.64□□□□□ -1.67
SCAF11-215ENST00000551391 TCIRG1Q13488 830 aa4.64□□□□□ -1.67
SCAF11-215ENST00000551391 ODF1Q14990 250 aa4.64□□□□□ -1.67
SCAF11-215ENST00000551391 HS1BP3Q53T59 392 aa4.64□□□□□ -1.67
SCAF11-215ENST00000551391 MUM1L1Q5H9M0 696 aa4.64□□□□□ -1.67
SCAF11-215ENST00000551391 EFCAB2Q5VUJ9 269 aa4.64□□□□□ -1.67
SCAF11-215ENST00000551391 FAM180AQ6UWF9 173 aa4.64□□□□□ -1.67
SCAF11-215ENST00000551391 PNMA8AQ86V59 439 aaPredicted RBP4.64□□□□□ -1.67
SCAF11-215ENST00000551391 GLB1L3Q8NCI6 653 aaPredicted RBP4.64□□□□□ -1.67
SCAF11-215ENST00000551391 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.64□□□□□ -1.67
SCAF11-215ENST00000551391 DNERQ8NFT8 737 aa4.64□□□□□ -1.67
SCAF11-215ENST00000551391 CFHR4Q92496 578 aa4.64□□□□□ -1.67
SCAF11-215ENST00000551391 RABGGTAQ92696 567 aa4.64□□□□□ -1.67
SCAF11-215ENST00000551391 TEKT5Q96M29 485 aa4.64□□□□□ -1.67
SCAF11-215ENST00000551391 PCED1AQ9H1Q7 454 aa4.64□□□□□ -1.67
SCAF11-215ENST00000551391 NR2E1Q9Y466 385 aa4.64□□□□□ -1.67
SCAF11-215ENST00000551391 RPTORQ8N122 1335 aa4.64□□□□□ -1.67
SCAF11-215ENST00000551391 MATN2O00339 956 aa4.63□□□□□ -1.67
SCAF11-215ENST00000551391 SLC26A4O43511 780 aa4.63□□□□□ -1.67
SCAF11-215ENST00000551391 AKAP10O43572 662 aa4.63□□□□□ -1.67
SCAF11-215ENST00000551391 XPOTO43592 962 aaKnown RBP4.63□□□□□ -1.67
SCAF11-215ENST00000551391 PHF2O75151 1096 aa4.63□□□□□ -1.67
SCAF11-215ENST00000551391 TMEM127O75204 238 aa4.63□□□□□ -1.67
SCAF11-215ENST00000551391 ABLIM3O94929 683 aa4.63□□□□□ -1.67
SCAF11-215ENST00000551391 VCAM1P19320 739 aa4.63□□□□□ -1.67
SCAF11-215ENST00000551391 CTSSP25774 331 aa4.63□□□□□ -1.67
SCAF11-215ENST00000551391 MCAMP43121 646 aa4.63□□□□□ -1.67
SCAF11-215ENST00000551391 ADAM8P78325 824 aa4.63□□□□□ -1.67
SCAF11-215ENST00000551391 ATP2C1P98194 919 aaPredicted RBP4.63□□□□□ -1.67
SCAF11-215ENST00000551391 PIN1Q13526 163 aaPredicted RBP4.63□□□□□ -1.67
SCAF11-215ENST00000551391 UBE3CQ15386 1083 aa4.63□□□□□ -1.67
SCAF11-215ENST00000551391 CMTR2Q8IYT2 770 aaKnown RBP4.63□□□□□ -1.67
SCAF11-215ENST00000551391 CPA6Q8N4T0 437 aa4.63□□□□□ -1.67
SCAF11-215ENST00000551391 GPR156Q8NFN8 814 aa4.63□□□□□ -1.67
SCAF11-215ENST00000551391 SNX33Q8WV41 574 aa4.63□□□□□ -1.67
SCAF11-215ENST00000551391 HOOK2Q96ED9 719 aa4.63□□□□□ -1.67
SCAF11-215ENST00000551391 NEIL1Q96FI4 390 aaPredicted RBP4.63□□□□□ -1.67
SCAF11-215ENST00000551391 AASDHPPTQ9NRN7 309 aa4.63□□□□□ -1.67
SCAF11-215ENST00000551391 RBM12Q9NTZ6 932 aaKnown RBP4.63□□□□□ -1.67
SCAF11-215ENST00000551391 PUF60Q9UHX1 559 aaKnown RBP4.63□□□□□ -1.67
SCAF11-215ENST00000551391 ZBTB21Q9ULJ3 1066 aa4.63□□□□□ -1.67
SCAF11-215ENST00000551391 GIT1Q9Y2X7 761 aa4.63□□□□□ -1.67
SCAF11-215ENST00000551391 RBM8AQ9Y5S9 174 aaKnown RBP4.63□□□□□ -1.67
SCAF11-215ENST00000551391 PATE3B3GLJ2 98 aa4.62□□□□□ -1.67
SCAF11-215ENST00000551391 NDUFS2O75306 463 aa4.62□□□□□ -1.67
SCAF11-215ENST00000551391 ALDH1A2O94788 518 aa4.62□□□□□ -1.67
SCAF11-215ENST00000551391 TOX4O94842 621 aa4.62□□□□□ -1.67
SCAF11-215ENST00000551391 GASTP01350 101 aa4.62□□□□□ -1.67
SCAF11-215ENST00000551391 CR2P20023 1033 aa4.62□□□□□ -1.67
SCAF11-215ENST00000551391 C5AR1P21730 350 aa4.62□□□□□ -1.67
SCAF11-215ENST00000551391 RAB27AP51159 221 aa4.62□□□□□ -1.67
SCAF11-215ENST00000551391 ADKP55263 362 aaKnown RBP4.62□□□□□ -1.67
SCAF11-215ENST00000551391 BPIFB4P59827 614 aa4.62□□□□□ -1.67
SCAF11-215ENST00000551391 TGFB2P61812 414 aa4.62□□□□□ -1.67
SCAF11-215ENST00000551391 ACAP2Q15057 778 aa4.62□□□□□ -1.67
SCAF11-215ENST00000551391 NFE2Q16621 373 aaPredicted RBP4.62□□□□□ -1.67
SCAF11-215ENST00000551391 SPDYAQ5MJ70 313 aa4.62□□□□□ -1.67
SCAF11-215ENST00000551391 OR14K1Q8NGZ2 314 aa4.62□□□□□ -1.67
SCAF11-215ENST00000551391 RIN2Q8WYP3 895 aaPredicted RBP4.62□□□□□ -1.67
SCAF11-215ENST00000551391 SLC2A13Q96QE2 648 aa4.62□□□□□ -1.67
SCAF11-215ENST00000551391 LMF1Q96S06 567 aa4.62□□□□□ -1.67
SCAF11-215ENST00000551391 NUP88Q99567 741 aaPredicted RBP4.62□□□□□ -1.67
SCAF11-215ENST00000551391 PTPN18Q99952 460 aa4.62□□□□□ -1.67
SCAF11-215ENST00000551391 CDH19Q9H159 772 aa4.62□□□□□ -1.67
SCAF11-215ENST00000551391 MEGF9Q9H1U4 602 aa4.62□□□□□ -1.67
SCAF11-215ENST00000551391 NELFAQ9H3P2 528 aa4.62□□□□□ -1.67
SCAF11-215ENST00000551391 OAZ3Q9UMX2 235 aa4.62□□□□□ -1.67
SCAF11-215ENST00000551391 ANKRD6Q9Y2G4 727 aa4.62□□□□□ -1.67
SCAF11-215ENST00000551391 LUC7L2Q9Y383 392 aaKnown RBP4.62□□□□□ -1.67
SCAF11-215ENST00000551391 TESMINQ9Y4I5 508 aa4.62□□□□□ -1.67
SCAF11-215ENST00000551391 NRP1O14786 923 aa4.61□□□□□ -1.67
SCAF11-215ENST00000551391 RFPL1O75677 317 aa4.61□□□□□ -1.67
SCAF11-215ENST00000551391 ZRANB2O95218 330 aaKnown RBP eCLIP4.61□□□□□ -1.67
SCAF11-215ENST00000551391 GSPT1P15170 499 aaKnown RBP4.61□□□□□ -1.67
SCAF11-215ENST00000551391 PPP3CAQ08209 521 aa4.61□□□□□ -1.67
SCAF11-215ENST00000551391 MGAT2Q10469 447 aa4.61□□□□□ -1.67
SCAF11-215ENST00000551391 DUSP8Q13202 625 aa4.61□□□□□ -1.67
SCAF11-215ENST00000551391 ABHD15Q6UXT9 468 aa4.61□□□□□ -1.67
SCAF11-215ENST00000551391 CMTM4Q8IZR5 234 aa4.61□□□□□ -1.67
SCAF11-215ENST00000551391 THEMISQ8N1K5 641 aaPredicted RBP4.61□□□□□ -1.67
SCAF11-215ENST00000551391 MSL3Q8N5Y2 521 aaKnown RBP4.61□□□□□ -1.67
SCAF11-215ENST00000551391 ANKRD53Q8N9V6 530 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms