RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 TNFSF13BQ9Y275 285 aa11.37□□□□□ -0.59
NEK3-203ENST00000551355 TRPV2Q9Y5S1 764 aa11.37□□□□□ -0.59
NEK3-203ENST00000551355 PCNTO95613 3336 aa11.37□□□□□ -0.59
NEK3-203ENST00000551355 SCN10AQ9Y5Y9 1956 aa11.37□□□□□ -0.59
NEK3-203ENST00000551355 WDR81Q562E7 1941 aa11.37□□□□□ -0.59
NEK3-203ENST00000551355 A0A0B4J269 797 aa11.36□□□□□ -0.59
NEK3-203ENST00000551355 N4BP3O15049 544 aa11.36□□□□□ -0.59
NEK3-203ENST00000551355 CLIC2O15247 247 aa11.36□□□□□ -0.59
NEK3-203ENST00000551355 KRT13P13646 458 aa11.36□□□□□ -0.59
NEK3-203ENST00000551355 THPOP40225 353 aa11.36□□□□□ -0.59
NEK3-203ENST00000551355 MTIF2P46199 727 aaKnown RBP11.36□□□□□ -0.59
NEK3-203ENST00000551355 UBASH3AP57075 661 aa11.36□□□□□ -0.59
NEK3-203ENST00000551355 MCL1Q07820 350 aa11.36□□□□□ -0.59
NEK3-203ENST00000551355 RBL2Q08999 1139 aa11.36□□□□□ -0.59
NEK3-203ENST00000551355 BFSP2Q13515 415 aa11.36□□□□□ -0.59
NEK3-203ENST00000551355 SNX17Q15036 470 aa11.36□□□□□ -0.59
NEK3-203ENST00000551355 FAM26DQ5JW98 314 aa11.36□□□□□ -0.59
NEK3-203ENST00000551355 ATF7IP2Q5U623 682 aa11.36□□□□□ -0.59
NEK3-203ENST00000551355 CEP135Q66GS9 1140 aa11.36□□□□□ -0.59
NEK3-203ENST00000551355 MPZL3Q6UWV2 235 aa11.36□□□□□ -0.59
NEK3-203ENST00000551355 INTS8Q75QN2 995 aaKnown RBP11.36□□□□□ -0.59
NEK3-203ENST00000551355 ANKRD33Q7Z3H0 272 aa11.36□□□□□ -0.59
NEK3-203ENST00000551355 IRF2BP1Q8IU81 584 aa11.36□□□□□ -0.59
NEK3-203ENST00000551355 FAM186BQ8IYM0 893 aa11.36□□□□□ -0.59
NEK3-203ENST00000551355 CCDC51Q96ER9 411 aa11.36□□□□□ -0.59
NEK3-203ENST00000551355 MRFAP1L1Q96HT8 127 aa11.36□□□□□ -0.59
NEK3-203ENST00000551355 FBXL18Q96ME1 805 aa11.36□□□□□ -0.59
NEK3-203ENST00000551355 ADPGKQ9BRR6 497 aa11.36□□□□□ -0.59
NEK3-203ENST00000551355 TUBGCP2Q9BSJ2 902 aa11.36□□□□□ -0.59
NEK3-203ENST00000551355 TCHPQ9BT92 498 aa11.36□□□□□ -0.59
NEK3-203ENST00000551355 TARS2Q9BW92 718 aaKnown RBP11.36□□□□□ -0.59
NEK3-203ENST00000551355 SENP6Q9GZR1 1112 aaPredicted RBP11.36□□□□□ -0.59
NEK3-203ENST00000551355 HSPBP1Q9NZL4 362 aa11.36□□□□□ -0.59
NEK3-203ENST00000551355 CEP350Q5VT06 3117 aa11.36□□□□□ -0.59
NEK3-203ENST00000551355 A0A1B0GUA9 196 aa11.35□□□□□ -0.59
NEK3-203ENST00000551355 ZNF233A6NK53 670 aa11.35□□□□□ -0.59
NEK3-203ENST00000551355 DCDC2CA8MYV0 355 aa11.35□□□□□ -0.59
NEK3-203ENST00000551355 ANKRD63C9JTQ0 380 aa11.35□□□□□ -0.59
NEK3-203ENST00000551355 GPR182O15218 404 aa11.35□□□□□ -0.59
NEK3-203ENST00000551355 EXTL3O43909 919 aa11.35□□□□□ -0.59
NEK3-203ENST00000551355 STX10O60499 249 aa11.35□□□□□ -0.59
NEK3-203ENST00000551355 B4GALT4O60513 344 aa11.35□□□□□ -0.59
NEK3-203ENST00000551355 AKAP3O75969 853 aa11.35□□□□□ -0.59
NEK3-203ENST00000551355 PARNO95453 639 aaKnown RBP11.35□□□□□ -0.59
NEK3-203ENST00000551355 MCF2P10911 925 aa11.35□□□□□ -0.59
NEK3-203ENST00000551355 COL6A1P12109 1028 aa11.35□□□□□ -0.59
NEK3-203ENST00000551355 ATP1A3P13637 1013 aa11.35□□□□□ -0.59
NEK3-203ENST00000551355 PROZP22891 400 aa11.35□□□□□ -0.59
NEK3-203ENST00000551355 ADSSP30520 456 aa11.35□□□□□ -0.59
NEK3-203ENST00000551355 MATR3P43243 847 aaKnown RBP eCLIP11.35□□□□□ -0.59
NEK3-203ENST00000551355 CYP2J2P51589 502 aa11.35□□□□□ -0.59
NEK3-203ENST00000551355 MCCD1P59942 119 aaPredicted RBP11.35□□□□□ -0.59
NEK3-203ENST00000551355 KRT31Q15323 416 aa11.35□□□□□ -0.59
NEK3-203ENST00000551355 AMHR2Q16671 573 aa11.35□□□□□ -0.59
NEK3-203ENST00000551355 MAN2A1Q16706 1144 aa11.35□□□□□ -0.59
NEK3-203ENST00000551355 DCAF4L1Q3SXM0 396 aa11.35□□□□□ -0.59
NEK3-203ENST00000551355 SLC39A4Q6P5W5 647 aa11.35□□□□□ -0.59
NEK3-203ENST00000551355 NOTUMQ6P988 496 aa11.35□□□□□ -0.59
NEK3-203ENST00000551355 SLC39A5Q6ZMH5 540 aa11.35□□□□□ -0.59
NEK3-203ENST00000551355 CATSPER4Q7RTX7 472 aa11.35□□□□□ -0.59
NEK3-203ENST00000551355 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.35□□□□□ -0.59
NEK3-203ENST00000551355 CREBRFQ8IUR6 639 aa11.35□□□□□ -0.59
NEK3-203ENST00000551355 FAM126BQ8IXS8 530 aa11.35□□□□□ -0.59
NEK3-203ENST00000551355 GPD1LQ8N335 351 aa11.35□□□□□ -0.59
NEK3-203ENST00000551355 OSMRQ99650 979 aa11.35□□□□□ -0.59
NEK3-203ENST00000551355 CBWD1Q9BRT8 395 aa11.35□□□□□ -0.59
NEK3-203ENST00000551355 MSTO1Q9BUK6 570 aa11.35□□□□□ -0.59
NEK3-203ENST00000551355 NOC4LQ9BVI4 516 aaKnown RBP11.35□□□□□ -0.59
NEK3-203ENST00000551355 MCOLN1Q9GZU1 580 aa11.35□□□□□ -0.59
NEK3-203ENST00000551355 MINDY3Q9H8M7 445 aa11.35□□□□□ -0.59
NEK3-203ENST00000551355 PTPRHQ9HD43 1115 aa11.35□□□□□ -0.59
NEK3-203ENST00000551355 CHST12Q9NRB3 414 aa11.35□□□□□ -0.59
NEK3-203ENST00000551355 TRMT13Q9NUP7 481 aaKnown RBP11.35□□□□□ -0.59
NEK3-203ENST00000551355 AGO2Q9UKV8 859 aaKnown RBP11.35□□□□□ -0.59
NEK3-203ENST00000551355 GINS2Q9Y248 185 aa11.35□□□□□ -0.59
NEK3-203ENST00000551355 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.35□□□□□ -0.59
NEK3-203ENST00000551355 CDY2AQ9Y6F7 541 aa11.35□□□□□ -0.59
NEK3-203ENST00000551355 A0A1B0GTH6 734 aa11.34□□□□□ -0.59
NEK3-203ENST00000551355 PITPNM1O00562 1244 aa11.34□□□□□ -0.59
NEK3-203ENST00000551355 OGTO15294 1046 aa11.34□□□□□ -0.59
NEK3-203ENST00000551355 TSPAN1O60635 241 aa11.34□□□□□ -0.59
NEK3-203ENST00000551355 ADCY5O95622 1261 aa11.34□□□□□ -0.59
NEK3-203ENST00000551355 CD4P01730 458 aa11.34□□□□□ -0.59
NEK3-203ENST00000551355 CDC25BP30305 580 aa11.34□□□□□ -0.59
NEK3-203ENST00000551355 ZNF75DP51815 510 aa11.34□□□□□ -0.59
NEK3-203ENST00000551355 COPB1P53618 953 aaKnown RBP11.34□□□□□ -0.59
NEK3-203ENST00000551355 MGAT3Q09327 533 aa11.34□□□□□ -0.59
NEK3-203ENST00000551355 TMEM62Q0P6H9 643 aa11.34□□□□□ -0.59
NEK3-203ENST00000551355 NOLC1Q14978 699 aaKnown RBP eCLIP11.34□□□□□ -0.59
NEK3-203ENST00000551355 SURF1Q15526 300 aa11.34□□□□□ -0.59
NEK3-203ENST00000551355 SNRNP35Q16560 246 aaKnown RBP11.34□□□□□ -0.59
NEK3-203ENST00000551355 TRIM71Q2Q1W2 868 aaKnown RBP11.34□□□□□ -0.59
NEK3-203ENST00000551355 VWA3BQ502W6 1294 aa11.34□□□□□ -0.59
NEK3-203ENST00000551355 FKBP15Q5T1M5 1219 aa11.34□□□□□ -0.59
NEK3-203ENST00000551355 NECAB2Q7Z6G3 386 aa11.34□□□□□ -0.59
NEK3-203ENST00000551355 TRIM59Q8IWR1 403 aa11.34□□□□□ -0.59
NEK3-203ENST00000551355 TMC2Q8TDI7 906 aa11.34□□□□□ -0.59
NEK3-203ENST00000551355 PPP1R13LQ8WUF5 828 aa11.34□□□□□ -0.59
NEK3-203ENST00000551355 PPP1R16BQ96T49 567 aa11.34□□□□□ -0.59
NEK3-203ENST00000551355 TRPV6Q9H1D0 765 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms