RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 NFRKBQ6P4R8 1299 aa12.48□□□□□ -0.41
RAB5C-208ENST00000551338 ZNF572Q7Z3I7 529 aaPredicted RBP12.48□□□□□ -0.41
RAB5C-208ENST00000551338 VPS36Q86VN1 386 aa12.48□□□□□ -0.41
RAB5C-208ENST00000551338 DNAAF5Q86Y56 855 aa12.48□□□□□ -0.41
RAB5C-208ENST00000551338 DEPTORQ8TB45 409 aa12.48□□□□□ -0.41
RAB5C-208ENST00000551338 U2AF1L4Q8WU68 220 aaKnown RBP12.48□□□□□ -0.41
RAB5C-208ENST00000551338 SEMA4DQ92854 862 aa12.48□□□□□ -0.41
RAB5C-208ENST00000551338 COPS5Q92905 334 aa12.48□□□□□ -0.41
RAB5C-208ENST00000551338 KAT5Q92993 513 aa12.48□□□□□ -0.41
RAB5C-208ENST00000551338 VTI1AQ96AJ9 217 aa12.48□□□□□ -0.41
RAB5C-208ENST00000551338 MS4A4AQ96JQ5 239 aa12.48□□□□□ -0.41
RAB5C-208ENST00000551338 FAM167AQ96KS9 214 aa12.48□□□□□ -0.41
RAB5C-208ENST00000551338 CAPZA3Q96KX2 299 aa12.48□□□□□ -0.41
RAB5C-208ENST00000551338 OSBPL9Q96SU4 736 aa12.48□□□□□ -0.41
RAB5C-208ENST00000551338 PNKPQ96T60 521 aa12.48□□□□□ -0.41
RAB5C-208ENST00000551338 ZNF408Q9H9D4 720 aa12.48□□□□□ -0.41
RAB5C-208ENST00000551338 NRBP2Q9NSY0 501 aa12.48□□□□□ -0.41
RAB5C-208ENST00000551338 ARGLU1Q9NWB6 273 aaPredicted RBP12.48□□□□□ -0.41
RAB5C-208ENST00000551338 KCNG1Q9UIX4 513 aa12.48□□□□□ -0.41
RAB5C-208ENST00000551338 INTUQ9ULD6 942 aa12.48□□□□□ -0.41
RAB5C-208ENST00000551338 CLEC11AQ9Y240 323 aa12.48□□□□□ -0.41
RAB5C-208ENST00000551338 SLC45A1Q9Y2W3 748 aa12.48□□□□□ -0.41
RAB5C-208ENST00000551338 PPME1Q9Y570 386 aa12.48□□□□□ -0.41
RAB5C-208ENST00000551338 STYXL1Q9Y6J8 313 aa12.48□□□□□ -0.41
RAB5C-208ENST00000551338 CCL15-CCL14A0A0B4J2E2 113 aa12.47□□□□□ -0.41
RAB5C-208ENST00000551338 BTBD19C9JJ37 291 aa12.47□□□□□ -0.41
RAB5C-208ENST00000551338 FOXN3O00409 490 aaPredicted RBP12.47□□□□□ -0.41
RAB5C-208ENST00000551338 MAFO75444 373 aaPredicted RBP12.47□□□□□ -0.41
RAB5C-208ENST00000551338 PALMO75781 387 aa12.47□□□□□ -0.41
RAB5C-208ENST00000551338 ZRANB2O95218 330 aaKnown RBP eCLIP12.47□□□□□ -0.41
RAB5C-208ENST00000551338 H2AFZP0C0S5 128 aa12.47□□□□□ -0.41
RAB5C-208ENST00000551338 TCP1P17987 556 aaKnown RBP12.47□□□□□ -0.41
RAB5C-208ENST00000551338 LIG4P49917 911 aa12.47□□□□□ -0.41
RAB5C-208ENST00000551338 WNT7BP56706 349 aa12.47□□□□□ -0.41
RAB5C-208ENST00000551338 TUBB4BP68371 445 aa12.47□□□□□ -0.41
RAB5C-208ENST00000551338 CETN1Q12798 172 aa12.47□□□□□ -0.41
RAB5C-208ENST00000551338 DRP2Q13474 957 aa12.47□□□□□ -0.41
RAB5C-208ENST00000551338 PLCB4Q15147 1175 aa12.47□□□□□ -0.41
RAB5C-208ENST00000551338 CCL15Q16663 113 aa12.47□□□□□ -0.41
RAB5C-208ENST00000551338 ZNF792Q3KQV3 632 aa12.47□□□□□ -0.41
RAB5C-208ENST00000551338 HSDL1Q3SXM5 330 aa12.47□□□□□ -0.41
RAB5C-208ENST00000551338 TMEM63BQ5T3F8 832 aa12.47□□□□□ -0.41
RAB5C-208ENST00000551338 KRT39Q6A163 491 aa12.47□□□□□ -0.41
RAB5C-208ENST00000551338 H2AFVQ71UI9 128 aa12.47□□□□□ -0.41
RAB5C-208ENST00000551338 TRIM50Q86XT4 487 aa12.47□□□□□ -0.41
RAB5C-208ENST00000551338 CREG2Q8IUH2 290 aa12.47□□□□□ -0.41
RAB5C-208ENST00000551338 FMNL3Q8IVF7 1028 aa12.47□□□□□ -0.41
RAB5C-208ENST00000551338 COG1Q8WTW3 980 aa12.47□□□□□ -0.41
RAB5C-208ENST00000551338 SLC7A3Q8WY07 619 aa12.47□□□□□ -0.41
RAB5C-208ENST00000551338 BRI3BPQ8WY22 251 aa12.47□□□□□ -0.41
RAB5C-208ENST00000551338 CCDC127Q96BQ5 260 aa12.47□□□□□ -0.41
RAB5C-208ENST00000551338 BICD1Q96G01 975 aa12.47□□□□□ -0.41
RAB5C-208ENST00000551338 KREMEN1Q96MU8 473 aa12.47□□□□□ -0.41
RAB5C-208ENST00000551338 HAPLN2Q9GZV7 340 aa12.47□□□□□ -0.41
RAB5C-208ENST00000551338 TMEM134Q9H6X4 195 aa12.47□□□□□ -0.41
RAB5C-208ENST00000551338 UBE2TQ9NPD8 197 aaPredicted RBP12.47□□□□□ -0.41
RAB5C-208ENST00000551338 RAB21Q9UL25 225 aa12.47□□□□□ -0.41
RAB5C-208ENST00000551338 DOCK3Q8IZD9 2030 aa12.47□□□□□ -0.41
RAB5C-208ENST00000551338 RALGAPA2Q2PPJ7 1873 aa12.46□□□□□ -0.41
RAB5C-208ENST00000551338 A0A0A6YYK5 440 aaPredicted RBP12.46□□□□□ -0.41
RAB5C-208ENST00000551338 IGKV6-21A0A0C4DH24 114 aa12.46□□□□□ -0.41
RAB5C-208ENST00000551338 ASB14A6NK59 587 aa12.46□□□□□ -0.41
RAB5C-208ENST00000551338 ZBTB42B2RXF5 422 aa12.46□□□□□ -0.41
RAB5C-208ENST00000551338 PDHXO00330 501 aa12.46□□□□□ -0.41
RAB5C-208ENST00000551338 KIAA0391O15091 583 aaKnown RBP12.46□□□□□ -0.41
RAB5C-208ENST00000551338 EXTL3O43909 919 aa12.46□□□□□ -0.41
RAB5C-208ENST00000551338 SEC31AO94979 1220 aaKnown RBP12.46□□□□□ -0.41
RAB5C-208ENST00000551338 CCDC172P0C7W6 258 aa12.46□□□□□ -0.41
RAB5C-208ENST00000551338 CETPP11597 493 aa12.46□□□□□ -0.41
RAB5C-208ENST00000551338 SCP2P22307 547 aa12.46□□□□□ -0.41
RAB5C-208ENST00000551338 GTF2H1P32780 548 aa12.46□□□□□ -0.41
RAB5C-208ENST00000551338 GPC3P51654 580 aa12.46□□□□□ -0.41
RAB5C-208ENST00000551338 NAP1L1P55209 391 aaKnown RBP12.46□□□□□ -0.41
RAB5C-208ENST00000551338 C2orf54Q08AI8 447 aa12.46□□□□□ -0.41
RAB5C-208ENST00000551338 PSMD6Q15008 389 aa12.46□□□□□ -0.41
RAB5C-208ENST00000551338 MEI1Q5TIA1 1274 aa12.46□□□□□ -0.41
RAB5C-208ENST00000551338 CC2D1AQ6P1N0 951 aaPredicted RBP12.46□□□□□ -0.41
RAB5C-208ENST00000551338 TMCO3Q6UWJ1 677 aa12.46□□□□□ -0.41
RAB5C-208ENST00000551338 C15orf39Q6ZRI6 1047 aa12.46□□□□□ -0.41
RAB5C-208ENST00000551338 ARMCX2Q7L311 632 aa12.46□□□□□ -0.41
RAB5C-208ENST00000551338 ANKRD23Q86SG2 305 aa12.46□□□□□ -0.41
RAB5C-208ENST00000551338 GLYCTKQ8IVS8 523 aa12.46□□□□□ -0.41
RAB5C-208ENST00000551338 CAGE1Q8TC20 777 aa12.46□□□□□ -0.41
RAB5C-208ENST00000551338 HELQQ8TDG4 1101 aa12.46□□□□□ -0.41
RAB5C-208ENST00000551338 TAS1R2Q8TE23 839 aa12.46□□□□□ -0.41
RAB5C-208ENST00000551338 ATP8B4Q8TF62 1192 aa12.46□□□□□ -0.41
RAB5C-208ENST00000551338 SLC20A1Q8WUM9 679 aa12.46□□□□□ -0.41
RAB5C-208ENST00000551338 PSPC1Q8WXF1 523 aaKnown RBP12.46□□□□□ -0.41
RAB5C-208ENST00000551338 BBXQ8WY36 941 aaPredicted RBP12.46□□□□□ -0.41
RAB5C-208ENST00000551338 RPGRIP1Q96KN7 1286 aa12.46□□□□□ -0.41
RAB5C-208ENST00000551338 POP1Q99575 1024 aaKnown RBP12.46□□□□□ -0.41
RAB5C-208ENST00000551338 TARS2Q9BW92 718 aaKnown RBP12.46□□□□□ -0.41
RAB5C-208ENST00000551338 PDGFCQ9NRA1 345 aa12.46□□□□□ -0.41
RAB5C-208ENST00000551338 FAM53CQ9NYF3 392 aa12.46□□□□□ -0.41
RAB5C-208ENST00000551338 MORF4L1Q9UBU8 362 aa12.46□□□□□ -0.41
RAB5C-208ENST00000551338 TSKSQ9UJT2 592 aa12.46□□□□□ -0.41
RAB5C-208ENST00000551338 DIS3Q9Y2L1 958 aaKnown RBP12.46□□□□□ -0.41
RAB5C-208ENST00000551338 CCDC151A5D8V7 595 aa12.45□□□□□ -0.42
RAB5C-208ENST00000551338 ADCY3O60266 1144 aa12.45□□□□□ -0.42
RAB5C-208ENST00000551338 GRIN3BO60391 1043 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms