RNA–Protein interactions for RNA: ENST00000551260.5

RACGAP1-223, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 4

Gene RACGAP1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-223ENST00000551260 NXF1Q9UBU9 619 aaKnown RBP6.85□□□□□ -1.31
RACGAP1-223ENST00000551260 KLK13Q9UKR3 277 aa6.85□□□□□ -1.31
RACGAP1-223ENST00000551260 ZNF215Q9UL58 517 aaPredicted RBP6.85□□□□□ -1.31
RACGAP1-223ENST00000551260 NOC2LQ9Y3T9 749 aaKnown RBP6.85□□□□□ -1.31
RACGAP1-223ENST00000551260 PCDHB11Q9Y5F2 797 aa6.85□□□□□ -1.31
RACGAP1-223ENST00000551260 CELSR3Q9NYQ7 3312 aa6.85□□□□□ -1.31
RACGAP1-223ENST00000551260 TEX15Q9BXT5 2789 aa6.85□□□□□ -1.31
RACGAP1-223ENST00000551260 APC2O95996 2303 aa6.84□□□□□ -1.31
RACGAP1-223ENST00000551260 ABCB11O95342 1321 aa6.84□□□□□ -1.31
RACGAP1-223ENST00000551260 TTLL8A6PVC2 850 aa6.84□□□□□ -1.31
RACGAP1-223ENST00000551260 INPPL1O15357 1258 aa6.84□□□□□ -1.31
RACGAP1-223ENST00000551260 MAN1A2O60476 641 aa6.84□□□□□ -1.31
RACGAP1-223ENST00000551260 RFPL2O75678 378 aa6.84□□□□□ -1.31
RACGAP1-223ENST00000551260 CAPNS1P04632 268 aa6.84□□□□□ -1.31
RACGAP1-223ENST00000551260 SSBP05455 408 aaKnown RBP eCLIP6.84□□□□□ -1.31
RACGAP1-223ENST00000551260 CTSAP10619 480 aa6.84□□□□□ -1.31
RACGAP1-223ENST00000551260 HSPD1P10809 573 aaKnown RBP6.84□□□□□ -1.31
RACGAP1-223ENST00000551260 PDHBP11177 359 aa6.84□□□□□ -1.31
RACGAP1-223ENST00000551260 PLA2G2AP14555 144 aa6.84□□□□□ -1.31
RACGAP1-223ENST00000551260 KLRC2P26717 231 aa6.84□□□□□ -1.31
RACGAP1-223ENST00000551260 HOXA13P31271 388 aaPredicted RBP6.84□□□□□ -1.31
RACGAP1-223ENST00000551260 NOVP48745 357 aa6.84□□□□□ -1.31
RACGAP1-223ENST00000551260 BCAR1P56945 870 aa6.84□□□□□ -1.31
RACGAP1-223ENST00000551260 SATB1Q01826 763 aa6.84□□□□□ -1.31
RACGAP1-223ENST00000551260 PRKCQQ04759 706 aa6.84□□□□□ -1.31
RACGAP1-223ENST00000551260 PPARAQ07869 468 aa6.84□□□□□ -1.31
RACGAP1-223ENST00000551260 SLFN5Q08AF3 891 aa6.84□□□□□ -1.31
RACGAP1-223ENST00000551260 CDC37Q16543 378 aaPredicted RBP6.84□□□□□ -1.31
RACGAP1-223ENST00000551260 CLLU1OSQ5K130 101 aa6.84□□□□□ -1.31
RACGAP1-223ENST00000551260 SH3PXD2AQ5TCZ1 1133 aa6.84□□□□□ -1.31
RACGAP1-223ENST00000551260 IER5Q5VY09 327 aa6.84□□□□□ -1.31
RACGAP1-223ENST00000551260 TCEAL6Q6IPX3 200 aa6.84□□□□□ -1.31
RACGAP1-223ENST00000551260 KCNV1Q6PIU1 500 aa6.84□□□□□ -1.31
RACGAP1-223ENST00000551260 VSIG10LQ86VR7 867 aa6.84□□□□□ -1.31
RACGAP1-223ENST00000551260 IFNL3Q8IZI9 196 aa6.84□□□□□ -1.31
RACGAP1-223ENST00000551260 GLIS3Q8NEA6 775 aa6.84□□□□□ -1.31
RACGAP1-223ENST00000551260 RHPN1Q8TCX5 695 aa6.84□□□□□ -1.31
RACGAP1-223ENST00000551260 HNRNPLLQ8WVV9 542 aaKnown RBP6.84□□□□□ -1.31
RACGAP1-223ENST00000551260 TCEAL3Q969E4 200 aa6.84□□□□□ -1.31
RACGAP1-223ENST00000551260 KLHL5Q96PQ7 755 aa6.84□□□□□ -1.31
RACGAP1-223ENST00000551260 PPP1R16BQ96T49 567 aa6.84□□□□□ -1.31
RACGAP1-223ENST00000551260 TMEM117Q9H0C3 514 aa6.84□□□□□ -1.31
RACGAP1-223ENST00000551260 MAN1C1Q9NR34 630 aa6.84□□□□□ -1.31
RACGAP1-223ENST00000551260 C1orf112Q9NSG2 853 aa6.84□□□□□ -1.31
RACGAP1-223ENST00000551260 TMEM161AQ9NX61 479 aa6.84□□□□□ -1.31
RACGAP1-223ENST00000551260 GINS2Q9Y248 185 aa6.84□□□□□ -1.31
RACGAP1-223ENST00000551260 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.84□□□□□ -1.31
RACGAP1-223ENST00000551260 SQORQ9Y6N5 450 aa6.84□□□□□ -1.31
RACGAP1-223ENST00000551260 URB1O60287 2271 aaKnown RBP6.84□□□□□ -1.31
RACGAP1-223ENST00000551260 PTPN13Q12923 2485 aa6.84□□□□□ -1.32
RACGAP1-223ENST00000551260 MYO16Q9Y6X6 1858 aa6.83□□□□□ -1.32
RACGAP1-223ENST00000551260 M0QZ92 97 aa6.83□□□□□ -1.32
RACGAP1-223ENST00000551260 GPAA1O43292 621 aa6.83□□□□□ -1.32
RACGAP1-223ENST00000551260 TRAK2O60296 914 aa6.83□□□□□ -1.32
RACGAP1-223ENST00000551260 RANBP6O60518 1105 aaKnown RBP6.83□□□□□ -1.32
RACGAP1-223ENST00000551260 WFS1O76024 890 aa6.83□□□□□ -1.32
RACGAP1-223ENST00000551260 CNPP09543 421 aaKnown RBP6.83□□□□□ -1.32
RACGAP1-223ENST00000551260 ZNF806P0C7X5 589 aa6.83□□□□□ -1.32
RACGAP1-223ENST00000551260 SPATA31D3P0C874 917 aa6.83□□□□□ -1.32
RACGAP1-223ENST00000551260 TGFB3P10600 412 aa6.83□□□□□ -1.32
RACGAP1-223ENST00000551260 TRIM27P14373 513 aa6.83□□□□□ -1.32
RACGAP1-223ENST00000551260 TCF7P36402 384 aaPredicted RBP6.83□□□□□ -1.32
RACGAP1-223ENST00000551260 MAGEA9P43362 315 aa6.83□□□□□ -1.32
RACGAP1-223ENST00000551260 RPS9P46781 194 aaKnown RBP6.83□□□□□ -1.32
RACGAP1-223ENST00000551260 HSD17B4P51659 736 aa6.83□□□□□ -1.32
RACGAP1-223ENST00000551260 NRLP54845 237 aa6.83□□□□□ -1.32
RACGAP1-223ENST00000551260 FAM189BP81408 668 aa6.83□□□□□ -1.32
RACGAP1-223ENST00000551260 KRT76Q01546 638 aa6.83□□□□□ -1.32
RACGAP1-223ENST00000551260 C19orf57Q0VDD7 668 aa6.83□□□□□ -1.32
RACGAP1-223ENST00000551260 TROAPQ12815 778 aa6.83□□□□□ -1.32
RACGAP1-223ENST00000551260 RNF43Q68DV7 783 aa6.83□□□□□ -1.32
RACGAP1-223ENST00000551260 HEATR6Q6AI08 1181 aaKnown RBP6.83□□□□□ -1.32
RACGAP1-223ENST00000551260 METTL7BQ6UX53 244 aa6.83□□□□□ -1.32
RACGAP1-223ENST00000551260 SPATA31D4Q6ZUB0 917 aa6.83□□□□□ -1.32
RACGAP1-223ENST00000551260 PROSER1Q86XN7 944 aa6.83□□□□□ -1.32
RACGAP1-223ENST00000551260 MCF2L2Q86YR7 1114 aa6.83□□□□□ -1.32
RACGAP1-223ENST00000551260 LRRC43Q8N309 656 aa6.83□□□□□ -1.32
RACGAP1-223ENST00000551260 TMEM57Q8N5G2 664 aa6.83□□□□□ -1.32
RACGAP1-223ENST00000551260 RNF169Q8NCN4 708 aa6.83□□□□□ -1.32
RACGAP1-223ENST00000551260 HELQQ8TDG4 1101 aa6.83□□□□□ -1.32
RACGAP1-223ENST00000551260 SMG7Q92540 1137 aaKnown RBP6.83□□□□□ -1.32
RACGAP1-223ENST00000551260 STAMQ92783 540 aa6.83□□□□□ -1.32
RACGAP1-223ENST00000551260 ZNF707Q96C28 371 aaPredicted RBP6.83□□□□□ -1.32
RACGAP1-223ENST00000551260 CRELD1Q96HD1 420 aa6.83□□□□□ -1.32
RACGAP1-223ENST00000551260 LRIG1Q96JA1 1093 aa6.83□□□□□ -1.32
RACGAP1-223ENST00000551260 KXD1Q9BQD3 176 aa6.83□□□□□ -1.32
RACGAP1-223ENST00000551260 OSBPL3Q9H4L5 887 aa6.83□□□□□ -1.32
RACGAP1-223ENST00000551260 RTEL1Q9NZ71 1219 aa6.83□□□□□ -1.32
RACGAP1-223ENST00000551260 PNMA2Q9UL42 364 aa6.83□□□□□ -1.32
RACGAP1-223ENST00000551260 NDRG2Q9UN36 371 aaKnown RBP6.83□□□□□ -1.32
RACGAP1-223ENST00000551260 ST3GAL5Q9UNP4 418 aa6.83□□□□□ -1.32
RACGAP1-223ENST00000551260 IRAK3Q9Y616 596 aa6.83□□□□□ -1.32
RACGAP1-223ENST00000551260 TNRC6BQ9UPQ9 1833 aaKnown RBP6.83□□□□□ -1.32
RACGAP1-223ENST00000551260 COL12A1Q99715 3063 aa6.82□□□□□ -1.32
RACGAP1-223ENST00000551260 FIGNL2A6NMB9 653 aa6.82□□□□□ -1.32
RACGAP1-223ENST00000551260 C4orf47A7E2U8 309 aa6.82□□□□□ -1.32
RACGAP1-223ENST00000551260 PATL2C9JE40 543 aaKnown RBP6.82□□□□□ -1.32
RACGAP1-223ENST00000551260 FOXD2O60548 495 aaPredicted RBP6.82□□□□□ -1.32
RACGAP1-223ENST00000551260 ZC3H11AO75152 810 aaKnown RBP eCLIP6.82□□□□□ -1.32
RACGAP1-223ENST00000551260 RPS6KA5O75582 802 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms