RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 CCDC172P0C7W6 258 aa13.68□□□□□ -0.22
CACNB3-217ENST00000550483 GNAT1P11488 350 aa13.68□□□□□ -0.22
CACNB3-217ENST00000550483 AP3M2P53677 418 aa13.68□□□□□ -0.22
CACNB3-217ENST00000550483 NKX3-2P78367 333 aa13.68□□□□□ -0.22
CACNB3-217ENST00000550483 KRT83P78385 493 aa13.68□□□□□ -0.22
CACNB3-217ENST00000550483 MYL7Q01449 175 aa13.68□□□□□ -0.22
CACNB3-217ENST00000550483 KCNMA1Q12791 1236 aa13.68□□□□□ -0.22
CACNB3-217ENST00000550483 SURF1Q15526 300 aa13.68□□□□□ -0.22
CACNB3-217ENST00000550483 FAM187BQ17R55 369 aa13.68□□□□□ -0.22
CACNB3-217ENST00000550483 APBB1IPQ7Z5R6 666 aaPredicted RBP13.68□□□□□ -0.22
CACNB3-217ENST00000550483 RNF149Q8NC42 400 aa13.68□□□□□ -0.22
CACNB3-217ENST00000550483 MFSD14AQ96MC6 490 aa13.68□□□□□ -0.22
CACNB3-217ENST00000550483 KIFC3Q9BVG8 833 aa13.68□□□□□ -0.22
CACNB3-217ENST00000550483 LSM14BQ9BX40 385 aaKnown RBP13.68□□□□□ -0.22
CACNB3-217ENST00000550483 CCDC113Q9H0I3 377 aa13.68□□□□□ -0.22
CACNB3-217ENST00000550483 RNPEPQ9H4A4 650 aa13.68□□□□□ -0.22
CACNB3-217ENST00000550483 PRMT7Q9NVM4 692 aaPredicted RBP13.68□□□□□ -0.22
CACNB3-217ENST00000550483 FLRT1Q9NZU1 646 aa13.68□□□□□ -0.22
CACNB3-217ENST00000550483 GCNT4Q9P109 453 aa13.68□□□□□ -0.22
CACNB3-217ENST00000550483 USP20Q9Y2K6 914 aa13.68□□□□□ -0.22
CACNB3-217ENST00000550483 BZW2Q9Y6E2 419 aaKnown RBP13.68□□□□□ -0.22
CACNB3-217ENST00000550483 MCM3APO60318 1980 aa13.68□□□□□ -0.22
CACNB3-217ENST00000550483 SIP14410 1827 aa13.67□□□□□ -0.22
CACNB3-217ENST00000550483 SSU72P8A0A1W2PR75 194 aa13.67□□□□□ -0.22
CACNB3-217ENST00000550483 ACKR2O00590 384 aa13.67□□□□□ -0.22
CACNB3-217ENST00000550483 KLRC1P26715 233 aa13.67□□□□□ -0.22
CACNB3-217ENST00000550483 ADSSP30520 456 aa13.67□□□□□ -0.22
CACNB3-217ENST00000550483 CYP2C19P33261 490 aa13.67□□□□□ -0.22
CACNB3-217ENST00000550483 PRMT2P55345 433 aa13.67□□□□□ -0.22
CACNB3-217ENST00000550483 PTENP60484 403 aa13.67□□□□□ -0.22
CACNB3-217ENST00000550483 CAP1Q01518 475 aa13.67□□□□□ -0.22
CACNB3-217ENST00000550483 GRIK4Q16099 956 aa13.67□□□□□ -0.22
CACNB3-217ENST00000550483 PTPN21Q16825 1174 aa13.67□□□□□ -0.22
CACNB3-217ENST00000550483 E4F1Q66K89 784 aaPredicted RBP13.67□□□□□ -0.22
CACNB3-217ENST00000550483 PDXDC1Q6P996 788 aa13.67□□□□□ -0.22
CACNB3-217ENST00000550483 MTHFD1LQ6UB35 978 aa13.67□□□□□ -0.22
CACNB3-217ENST00000550483 TAS1R3Q7RTX0 852 aa13.67□□□□□ -0.22
CACNB3-217ENST00000550483 FZD8Q9H461 694 aa13.67□□□□□ -0.22
CACNB3-217ENST00000550483 LUC7LQ9NQ29 371 aaKnown RBP13.67□□□□□ -0.22
CACNB3-217ENST00000550483 AGO2Q9UKV8 859 aaKnown RBP13.67□□□□□ -0.22
CACNB3-217ENST00000550483 A0A0B4J269 797 aa13.66□□□□□ -0.22
CACNB3-217ENST00000550483 ANKRD63C9JTQ0 380 aa13.66□□□□□ -0.22
CACNB3-217ENST00000550483 HAS3O00219 553 aa13.66□□□□□ -0.22
CACNB3-217ENST00000550483 DLL1O00548 723 aa13.66□□□□□ -0.22
CACNB3-217ENST00000550483 ZC3H11AO75152 810 aaKnown RBP eCLIP13.66□□□□□ -0.22
CACNB3-217ENST00000550483 OFD1O75665 1012 aa13.66□□□□□ -0.22
CACNB3-217ENST00000550483 PRKCBP05771 671 aa13.66□□□□□ -0.22
CACNB3-217ENST00000550483 ZNF286BP0CG31 522 aa13.66□□□□□ -0.22
CACNB3-217ENST00000550483 CYBAP13498 195 aa13.66□□□□□ -0.22
CACNB3-217ENST00000550483 PON1P27169 355 aa13.66□□□□□ -0.22
CACNB3-217ENST00000550483 MXI1P50539 228 aa13.66□□□□□ -0.22
CACNB3-217ENST00000550483 GJA9P57773 515 aa13.66□□□□□ -0.22
CACNB3-217ENST00000550483 CYP24A1Q07973 514 aa13.66□□□□□ -0.22
CACNB3-217ENST00000550483 MKRN4PQ13434 485 aaPredicted RBP13.66□□□□□ -0.22
CACNB3-217ENST00000550483 PSMD6Q15008 389 aa13.66□□□□□ -0.22
CACNB3-217ENST00000550483 PTPN14Q15678 1187 aa13.66□□□□□ -0.22
CACNB3-217ENST00000550483 SLC9C1Q4G0N8 1177 aa13.66□□□□□ -0.22
CACNB3-217ENST00000550483 DNTTIP2Q5QJE6 756 aaKnown RBP13.66□□□□□ -0.22
CACNB3-217ENST00000550483 TMEM63BQ5T3F8 832 aa13.66□□□□□ -0.22
CACNB3-217ENST00000550483 GJC2Q5T442 439 aaPredicted RBP13.66□□□□□ -0.22
CACNB3-217ENST00000550483 KLHDC7AQ5VTJ3 777 aa13.66□□□□□ -0.22
CACNB3-217ENST00000550483 SFMBT2Q5VUG0 894 aa13.66□□□□□ -0.22
CACNB3-217ENST00000550483 KRT39Q6A163 491 aa13.66□□□□□ -0.22
CACNB3-217ENST00000550483 SLC39A4Q6P5W5 647 aa13.66□□□□□ -0.22
CACNB3-217ENST00000550483 TSHZ1Q6ZSZ6 1077 aa13.66□□□□□ -0.22
CACNB3-217ENST00000550483 SRGAP1Q7Z6B7 1085 aa13.66□□□□□ -0.22
CACNB3-217ENST00000550483 RHPN2Q8IUC4 686 aa13.66□□□□□ -0.22
CACNB3-217ENST00000550483 METTL13Q8N6R0 699 aa13.66□□□□□ -0.22
CACNB3-217ENST00000550483 BAP1Q92560 729 aa13.66□□□□□ -0.22
CACNB3-217ENST00000550483 SPAG5Q96R06 1193 aa13.66□□□□□ -0.22
CACNB3-217ENST00000550483 UPF3AQ9H1J1 476 aaKnown RBP13.66□□□□□ -0.22
CACNB3-217ENST00000550483 GANQ9H2C0 597 aa13.66□□□□□ -0.22
CACNB3-217ENST00000550483 PCIF1Q9H4Z3 704 aa13.66□□□□□ -0.22
CACNB3-217ENST00000550483 TMEM8AQ9HCN3 771 aa13.66□□□□□ -0.22
CACNB3-217ENST00000550483 AGPAT5Q9NUQ2 364 aa13.66□□□□□ -0.22
CACNB3-217ENST00000550483 PPP2R2CQ9Y2T4 447 aa13.66□□□□□ -0.22
CACNB3-217ENST00000550483 SMIM35A0A1B0GVV1 85 aa13.65□□□□□ -0.22
CACNB3-217ENST00000550483 EIF3CLB5ME19 914 aaKnown RBP13.65□□□□□ -0.22
CACNB3-217ENST00000550483 CLDN3O15551 220 aa13.65□□□□□ -0.22
CACNB3-217ENST00000550483 SEPT4O43236 478 aa13.65□□□□□ -0.22
CACNB3-217ENST00000550483 MSCO60682 206 aa13.65□□□□□ -0.22
CACNB3-217ENST00000550483 UCHL3P15374 230 aa13.65□□□□□ -0.22
CACNB3-217ENST00000550483 FLT3LGP49771 235 aa13.65□□□□□ -0.22
CACNB3-217ENST00000550483 POLR2FP61218 127 aaKnown RBP13.65□□□□□ -0.22
CACNB3-217ENST00000550483 CLDN10P78369 228 aa13.65□□□□□ -0.22
CACNB3-217ENST00000550483 MAPK8IP2Q13387 824 aaPredicted RBP13.65□□□□□ -0.22
CACNB3-217ENST00000550483 MFSD10Q14728 455 aa13.65□□□□□ -0.22
CACNB3-217ENST00000550483 CCL14Q16627 93 aa13.65□□□□□ -0.22
CACNB3-217ENST00000550483 FSCN1Q16658 493 aaKnown RBP13.65□□□□□ -0.22
CACNB3-217ENST00000550483 TRIM65Q6PJ69 517 aa13.65□□□□□ -0.22
CACNB3-217ENST00000550483 ZNF662Q6ZS27 426 aa13.65□□□□□ -0.22
CACNB3-217ENST00000550483 RRAGAQ7L523 313 aa13.65□□□□□ -0.22
CACNB3-217ENST00000550483 LRRC71Q8N4P6 559 aa13.65□□□□□ -0.22
CACNB3-217ENST00000550483 CD99L2Q8TCZ2 262 aa13.65□□□□□ -0.22
CACNB3-217ENST00000550483 PARD3BQ8TEW8 1205 aa13.65□□□□□ -0.22
CACNB3-217ENST00000550483 ERO1AQ96HE7 468 aa13.65□□□□□ -0.22
CACNB3-217ENST00000550483 PPP1R13BQ96KQ4 1090 aa13.65□□□□□ -0.22
CACNB3-217ENST00000550483 CCDC42Q96M95 316 aa13.65□□□□□ -0.22
CACNB3-217ENST00000550483 FNBP1Q96RU3 617 aa13.65□□□□□ -0.22
CACNB3-217ENST00000550483 EIF3CQ99613 913 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms