RNA–Protein interactions for RNA: ENST00000550375.1

BRF1-217, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,362 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-217ENST00000550375 KCNA1Q09470 495 aa18.89■□□□□ 0.61
BRF1-217ENST00000550375 SLC27A1Q6PCB7 646 aa18.89■□□□□ 0.61
BRF1-217ENST00000550375 HERC6Q8IVU3 1022 aa18.89■□□□□ 0.61
BRF1-217ENST00000550375 GPT2Q8TD30 523 aa18.89■□□□□ 0.61
BRF1-217ENST00000550375 TOP1MTQ969P6 601 aa18.89■□□□□ 0.61
BRF1-217ENST00000550375 CCDC51Q96ER9 411 aa18.89■□□□□ 0.61
BRF1-217ENST00000550375 ZBED2Q9BTP6 218 aa18.89■□□□□ 0.61
BRF1-217ENST00000550375 STRA6Q9BX79 667 aa18.89■□□□□ 0.61
BRF1-217ENST00000550375 TRIM6Q9C030 488 aaPredicted RBP18.89■□□□□ 0.61
BRF1-217ENST00000550375 IKZF4Q9H2S9 585 aa18.89■□□□□ 0.61
BRF1-217ENST00000550375 FAM105AQ9NUU6 356 aa18.89■□□□□ 0.61
BRF1-217ENST00000550375 PCDHB7Q9Y5E2 793 aa18.89■□□□□ 0.61
BRF1-217ENST00000550375 PCDHB2Q9Y5E7 798 aa18.89■□□□□ 0.61
BRF1-217ENST00000550375 RANBP2P49792 3224 aaKnown RBP18.89■□□□□ 0.61
BRF1-217ENST00000550375 A0A0U1RQF3 1178 aa18.88■□□□□ 0.61
BRF1-217ENST00000550375 PPP1R37O75864 691 aa18.88■□□□□ 0.61
BRF1-217ENST00000550375 SMC2O95347 1197 aa18.88■□□□□ 0.61
BRF1-217ENST00000550375 ABCD1P33897 745 aa18.88■□□□□ 0.61
BRF1-217ENST00000550375 LIG4P49917 911 aa18.88■□□□□ 0.61
BRF1-217ENST00000550375 RABGGTBP53611 331 aa18.88■□□□□ 0.61
BRF1-217ENST00000550375 FAM189BP81408 668 aa18.88■□□□□ 0.61
BRF1-217ENST00000550375 STK4Q13043 487 aa18.88■□□□□ 0.61
BRF1-217ENST00000550375 L1TD1Q5T7N2 865 aaKnown RBP18.88■□□□□ 0.61
BRF1-217ENST00000550375 ZBTB33Q86T24 672 aa18.88■□□□□ 0.61
BRF1-217ENST00000550375 ECHDC2Q86YB7 292 aa18.88■□□□□ 0.61
BRF1-217ENST00000550375 MAP4K3Q8IVH8 894 aa18.88■□□□□ 0.61
BRF1-217ENST00000550375 ELOA2Q8IYF1 753 aaPredicted RBP18.88■□□□□ 0.61
BRF1-217ENST00000550375 PHOSPHO2Q8TCD6 241 aa18.88■□□□□ 0.61
BRF1-217ENST00000550375 LPPQ93052 612 aa18.88■□□□□ 0.61
BRF1-217ENST00000550375 SMARCE1Q969G3 411 aa18.88■□□□□ 0.61
BRF1-217ENST00000550375 HVCN1Q96D96 273 aa18.88■□□□□ 0.61
BRF1-217ENST00000550375 ZBTB45Q96K62 511 aaPredicted RBP18.88■□□□□ 0.61
BRF1-217ENST00000550375 ACCSQ96QU6 501 aa18.88■□□□□ 0.61
BRF1-217ENST00000550375 TCHPQ9BT92 498 aa18.88■□□□□ 0.61
BRF1-217ENST00000550375 ANKFY1Q9P2R3 1169 aa18.88■□□□□ 0.61
BRF1-217ENST00000550375 TNFSF13BQ9Y275 285 aa18.88■□□□□ 0.61
BRF1-217ENST00000550375 PCDHA5Q9Y5H7 936 aa18.88■□□□□ 0.61
BRF1-217ENST00000550375 A0A1W2PPC1 479 aa18.87■□□□□ 0.61
BRF1-217ENST00000550375 HNRNPDLO14979 420 aaKnown RBP18.87■□□□□ 0.61
BRF1-217ENST00000550375 STAG3L1P0CL83 205 aa18.87■□□□□ 0.61
BRF1-217ENST00000550375 MATR3P43243 847 aaKnown RBP eCLIP18.87■□□□□ 0.61
BRF1-217ENST00000550375 RAB27AP51159 221 aa18.87■□□□□ 0.61
BRF1-217ENST00000550375 PSMD2Q13200 908 aa18.87■□□□□ 0.61
BRF1-217ENST00000550375 ALCAMQ13740 583 aa18.87■□□□□ 0.61
BRF1-217ENST00000550375 STXBP4Q6ZWJ1 553 aa18.87■□□□□ 0.61
BRF1-217ENST00000550375 NPAS4Q8IUM7 802 aa18.87■□□□□ 0.61
BRF1-217ENST00000550375 SYCP3Q8IZU3 236 aa18.87■□□□□ 0.61
BRF1-217ENST00000550375 KCNN1Q92952 543 aa18.87■□□□□ 0.61
BRF1-217ENST00000550375 ADPGKQ9BRR6 497 aa18.87■□□□□ 0.61
BRF1-217ENST00000550375 TRAIPQ9BWF2 469 aa18.87■□□□□ 0.61
BRF1-217ENST00000550375 APOL6Q9BWW8 343 aa18.87■□□□□ 0.61
BRF1-217ENST00000550375 TMEM161AQ9NX61 479 aa18.87■□□□□ 0.61
BRF1-217ENST00000550375 HES2Q9Y543 173 aa18.87■□□□□ 0.61
BRF1-217ENST00000550375 IPPQ9Y573 584 aa18.87■□□□□ 0.61
BRF1-217ENST00000550375 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.86■□□□□ 0.61
BRF1-217ENST00000550375 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.86■□□□□ 0.61
BRF1-217ENST00000550375 TISP43B9A030 160 aa18.86■□□□□ 0.61
BRF1-217ENST00000550375 ANKRD63C9JTQ0 380 aa18.86■□□□□ 0.61
BRF1-217ENST00000550375 RHOBTB3O94955 611 aa18.86■□□□□ 0.61
BRF1-217ENST00000550375 HARSP12081 509 aaKnown RBP18.86■□□□□ 0.61
BRF1-217ENST00000550375 SKIP12755 728 aa18.86■□□□□ 0.61
BRF1-217ENST00000550375 ATF7P17544 494 aaPredicted RBP18.86■□□□□ 0.61
BRF1-217ENST00000550375 GATMP50440 423 aa18.86■□□□□ 0.61
BRF1-217ENST00000550375 KCNB1Q14721 858 aa18.86■□□□□ 0.61
BRF1-217ENST00000550375 ZNF568Q3ZCX4 644 aa18.86■□□□□ 0.61
BRF1-217ENST00000550375 ZPBP2Q6X784 338 aa18.86■□□□□ 0.61
BRF1-217ENST00000550375 EPM2AIP1Q7L775 607 aaPredicted RBP18.86■□□□□ 0.61
BRF1-217ENST00000550375 NELFCDQ8IXH7 590 aa18.86■□□□□ 0.61
BRF1-217ENST00000550375 KIAA0895Q8NCT3 520 aa18.86■□□□□ 0.61
BRF1-217ENST00000550375 SMG8Q8ND04 991 aaKnown RBP18.86■□□□□ 0.61
BRF1-217ENST00000550375 CLSTN2Q9H4D0 955 aa18.86■□□□□ 0.61
BRF1-217ENST00000550375 PTPRHQ9HD43 1115 aa18.86■□□□□ 0.61
BRF1-217ENST00000550375 EXOC7Q9UPT5 735 aa18.86■□□□□ 0.61
BRF1-217ENST00000550375 FNDC1Q4ZHG4 1894 aaPredicted RBP18.85■□□□□ 0.61
BRF1-217ENST00000550375 MEIS3P2A8K0S8 358 aa18.85■□□□□ 0.61
BRF1-217ENST00000550375 TLL1O43897 1013 aa18.85■□□□□ 0.61
BRF1-217ENST00000550375 ZNF623O75123 536 aa18.85■□□□□ 0.61
BRF1-217ENST00000550375 TOM1L1O75674 476 aa18.85■□□□□ 0.61
BRF1-217ENST00000550375 GJB5O95377 273 aa18.85■□□□□ 0.61
BRF1-217ENST00000550375 FGFR1P11362 822 aa18.85■□□□□ 0.61
BRF1-217ENST00000550375 ISM2Q6H9L7 571 aa18.85■□□□□ 0.61
BRF1-217ENST00000550375 MPZL3Q6UWV2 235 aa18.85■□□□□ 0.61
BRF1-217ENST00000550375 ZNF598Q86UK7 904 aaKnown RBP18.85■□□□□ 0.61
BRF1-217ENST00000550375 CRIPAKQ8N1N5 446 aa18.85■□□□□ 0.61
BRF1-217ENST00000550375 ZNF507Q8TCN5 953 aa18.85■□□□□ 0.61
BRF1-217ENST00000550375 SCFD1Q8WVM8 642 aa18.85■□□□□ 0.61
BRF1-217ENST00000550375 GSDMAQ96QA5 445 aa18.85■□□□□ 0.61
BRF1-217ENST00000550375 CDT1Q9H211 546 aa18.85■□□□□ 0.61
BRF1-217ENST00000550375 RNF39Q9H2S5 420 aa18.85■□□□□ 0.61
BRF1-217ENST00000550375 NXF3Q9H4D5 531 aaKnown RBP18.85■□□□□ 0.61
BRF1-217ENST00000550375 ELAC1Q9H777 363 aaKnown RBP18.85■□□□□ 0.61
BRF1-217ENST00000550375 RNF216Q9NWF9 866 aaPredicted RBP18.85■□□□□ 0.61
BRF1-217ENST00000550375 RMND1Q9NWS8 449 aa18.85■□□□□ 0.61
BRF1-217ENST00000550375 GDAQ9Y2T3 454 aa18.85■□□□□ 0.61
BRF1-217ENST00000550375 EIF3DO15371 548 aaKnown RBP eCLIP18.84■□□□□ 0.61
BRF1-217ENST00000550375 CLDN3O15551 220 aa18.84■□□□□ 0.61
BRF1-217ENST00000550375 EOMESO95936 686 aa18.84■□□□□ 0.61
BRF1-217ENST00000550375 PIGRP01833 764 aa18.84■□□□□ 0.61
BRF1-217ENST00000550375 ITGA4P13612 1032 aa18.84■□□□□ 0.61
BRF1-217ENST00000550375 MYOGP15173 224 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms