RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 TOB2Q14106 344 aaPredicted RBP8.56□□□□□ -1.04
NEK3-201ENST00000550331 SMC1AQ14683 1233 aaKnown RBP8.56□□□□□ -1.04
NEK3-201ENST00000550331 NONOQ15233 471 aaKnown RBP eCLIP8.56□□□□□ -1.04
NEK3-201ENST00000550331 PTPN21Q16825 1174 aa8.56□□□□□ -1.04
NEK3-201ENST00000550331 PLPP4Q5VZY2 271 aa8.56□□□□□ -1.04
NEK3-201ENST00000550331 CPLX2Q6PUV4 134 aaKnown RBP8.56□□□□□ -1.04
NEK3-201ENST00000550331 ZBTB33Q86T24 672 aa8.56□□□□□ -1.04
NEK3-201ENST00000550331 ZNF410Q86VK4 478 aa8.56□□□□□ -1.04
NEK3-201ENST00000550331 BLIDQ8IZY5 108 aa8.56□□□□□ -1.04
NEK3-201ENST00000550331 SLC39A11Q8N1S5 342 aa8.56□□□□□ -1.04
NEK3-201ENST00000550331 ETNPPLQ8TBG4 499 aa8.56□□□□□ -1.04
NEK3-201ENST00000550331 NLRP7Q8WX94 980 aa8.56□□□□□ -1.04
NEK3-201ENST00000550331 PSMG3-AS1Q96PY0 264 aa8.56□□□□□ -1.04
NEK3-201ENST00000550331 GCOM2Q9BZD3 368 aaPredicted RBP8.56□□□□□ -1.04
NEK3-201ENST00000550331 TM6SF1Q9BZW5 370 aa8.56□□□□□ -1.04
NEK3-201ENST00000550331 INO80BQ9C086 356 aaPredicted RBP8.56□□□□□ -1.04
NEK3-201ENST00000550331 S1PR5Q9H228 398 aa8.56□□□□□ -1.04
NEK3-201ENST00000550331 CYP46A1Q9Y6A2 500 aa8.56□□□□□ -1.04
NEK3-201ENST00000550331 HIDE1A8MVS5 230 aa8.55□□□□□ -1.04
NEK3-201ENST00000550331 MAFO75444 373 aaPredicted RBP8.55□□□□□ -1.04
NEK3-201ENST00000550331 TDP2O95551 362 aa8.55□□□□□ -1.04
NEK3-201ENST00000550331 SKIP12755 728 aa8.55□□□□□ -1.04
NEK3-201ENST00000550331 PBX3P40426 434 aa8.55□□□□□ -1.04
NEK3-201ENST00000550331 TECP42680 631 aa8.55□□□□□ -1.04
NEK3-201ENST00000550331 PHKA2P46019 1235 aa8.55□□□□□ -1.04
NEK3-201ENST00000550331 ALDH7A1P49419 539 aaKnown RBP8.55□□□□□ -1.04
NEK3-201ENST00000550331 RAB27AP51159 221 aa8.55□□□□□ -1.04
NEK3-201ENST00000550331 DRP2Q13474 957 aa8.55□□□□□ -1.04
NEK3-201ENST00000550331 BMS1Q14692 1282 aaKnown RBP8.55□□□□□ -1.04
NEK3-201ENST00000550331 NPY5RQ15761 445 aa8.55□□□□□ -1.04
NEK3-201ENST00000550331 MTERF2Q49AM1 385 aa8.55□□□□□ -1.04
NEK3-201ENST00000550331 TPRNQ4KMQ1 711 aa8.55□□□□□ -1.04
NEK3-201ENST00000550331 MSS51Q4VC12 460 aa8.55□□□□□ -1.04
NEK3-201ENST00000550331 SYCE2Q6PIF2 218 aa8.55□□□□□ -1.04
NEK3-201ENST00000550331 KRT25Q7Z3Z0 450 aa8.55□□□□□ -1.04
NEK3-201ENST00000550331 TMC7Q7Z402 723 aa8.55□□□□□ -1.04
NEK3-201ENST00000550331 MRPL43Q8N983 215 aaKnown RBP8.55□□□□□ -1.04
NEK3-201ENST00000550331 RNF169Q8NCN4 708 aa8.55□□□□□ -1.04
NEK3-201ENST00000550331 HELQQ8TDG4 1101 aa8.55□□□□□ -1.04
NEK3-201ENST00000550331 CASP10Q92851 521 aa8.55□□□□□ -1.04
NEK3-201ENST00000550331 GJA10Q969M2 543 aa8.55□□□□□ -1.04
NEK3-201ENST00000550331 ZNF668Q96K58 619 aaPredicted RBP8.55□□□□□ -1.04
NEK3-201ENST00000550331 RIPOR3Q96MK2 946 aa8.55□□□□□ -1.04
NEK3-201ENST00000550331 NECTIN4Q96NY8 510 aa8.55□□□□□ -1.04
NEK3-201ENST00000550331 JPH2Q9BR39 696 aaPredicted RBP8.55□□□□□ -1.04
NEK3-201ENST00000550331 DDX25Q9UHL0 483 aaKnown RBP8.55□□□□□ -1.04
NEK3-201ENST00000550331 PPME1Q9Y570 386 aa8.55□□□□□ -1.04
NEK3-201ENST00000550331 HCFC2Q9Y5Z7 792 aa8.55□□□□□ -1.04
NEK3-201ENST00000550331 FNDC1Q4ZHG4 1894 aaPredicted RBP8.54□□□□□ -1.04
NEK3-201ENST00000550331 A0A087WZ62 844 aa8.54□□□□□ -1.04
NEK3-201ENST00000550331 KRTAP9-6A0A140TA67 174 aa8.54□□□□□ -1.04
NEK3-201ENST00000550331 TMEM150BA6NC51 233 aa8.54□□□□□ -1.04
NEK3-201ENST00000550331 CAPN5O15484 640 aaPredicted RBP8.54□□□□□ -1.04
NEK3-201ENST00000550331 DKC1O60832 514 aaKnown RBP eCLIP8.54□□□□□ -1.04
NEK3-201ENST00000550331 ZNF623O75123 536 aa8.54□□□□□ -1.04
NEK3-201ENST00000550331 CSDE1O75534 798 aaKnown RBP8.54□□□□□ -1.04
NEK3-201ENST00000550331 CDKL5O76039 1030 aa8.54□□□□□ -1.04
NEK3-201ENST00000550331 GCFC2P16383 781 aaKnown RBP8.54□□□□□ -1.04
NEK3-201ENST00000550331 FGFR4P22455 802 aa8.54□□□□□ -1.04
NEK3-201ENST00000550331 NBL1P41271 181 aa8.54□□□□□ -1.04
NEK3-201ENST00000550331 POLGP54098 1239 aaPredicted RBP8.54□□□□□ -1.04
NEK3-201ENST00000550331 BCAR1P56945 870 aa8.54□□□□□ -1.04
NEK3-201ENST00000550331 PSMC5P62195 406 aa8.54□□□□□ -1.04
NEK3-201ENST00000550331 ITIH3Q06033 890 aa8.54□□□□□ -1.04
NEK3-201ENST00000550331 PPP2R5CQ13362 524 aa8.54□□□□□ -1.04
NEK3-201ENST00000550331 GIT2Q14161 759 aa8.54□□□□□ -1.04
NEK3-201ENST00000550331 TWF2Q6IBS0 349 aaKnown RBP8.54□□□□□ -1.04
NEK3-201ENST00000550331 PPP4R3AQ6IN85 833 aa8.54□□□□□ -1.04
NEK3-201ENST00000550331 CES5AQ6NT32 575 aa8.54□□□□□ -1.04
NEK3-201ENST00000550331 GLB1LQ6UWU2 654 aa8.54□□□□□ -1.04
NEK3-201ENST00000550331 ANO5Q75V66 913 aa8.54□□□□□ -1.04
NEK3-201ENST00000550331 FRMD5Q7Z6J6 570 aa8.54□□□□□ -1.04
NEK3-201ENST00000550331 RHPN2Q8IUC4 686 aa8.54□□□□□ -1.04
NEK3-201ENST00000550331 EXOC8Q8IYI6 725 aa8.54□□□□□ -1.04
NEK3-201ENST00000550331 SLC7A3Q8WY07 619 aa8.54□□□□□ -1.04
NEK3-201ENST00000550331 TMEM169Q96HH4 297 aa8.54□□□□□ -1.04
NEK3-201ENST00000550331 FAM20AQ96MK3 541 aa8.54□□□□□ -1.04
NEK3-201ENST00000550331 NAP1L4Q99733 375 aaKnown RBP8.54□□□□□ -1.04
NEK3-201ENST00000550331 FDXACB1Q9BRP7 624 aaPredicted RBP8.54□□□□□ -1.04
NEK3-201ENST00000550331 ADAM7Q9H2U9 754 aa8.54□□□□□ -1.04
NEK3-201ENST00000550331 KCNMB3Q9NPA1 279 aa8.54□□□□□ -1.04
NEK3-201ENST00000550331 CYP26B1Q9NR63 512 aa8.54□□□□□ -1.04
NEK3-201ENST00000550331 FAM105AQ9NUU6 356 aa8.54□□□□□ -1.04
NEK3-201ENST00000550331 SUCLA2Q9P2R7 463 aaPredicted RBP8.54□□□□□ -1.04
NEK3-201ENST00000550331 VAV3Q9UKW4 847 aa8.54□□□□□ -1.04
NEK3-201ENST00000550331 PIN4Q9Y237 131 aaKnown RBP8.54□□□□□ -1.04
NEK3-201ENST00000550331 NR2E1Q9Y466 385 aa8.54□□□□□ -1.04
NEK3-201ENST00000550331 IRAK3Q9Y616 596 aa8.54□□□□□ -1.04
NEK3-201ENST00000550331 STK36Q9NRP7 1315 aa8.54□□□□□ -1.04
NEK3-201ENST00000550331 C2orf71A6NGG8 1288 aa8.53□□□□□ -1.04
NEK3-201ENST00000550331 DDX11L8A8MPP1 907 aa8.53□□□□□ -1.04
NEK3-201ENST00000550331 TBX3O15119 743 aa8.53□□□□□ -1.04
NEK3-201ENST00000550331 SLC37A4O43826 429 aa8.53□□□□□ -1.04
NEK3-201ENST00000550331 CLASP2O75122 1294 aaKnown RBP8.53□□□□□ -1.04
NEK3-201ENST00000550331 ZC3H11AO75152 810 aaKnown RBP eCLIP8.53□□□□□ -1.045e-6■■□□□ 12.3
NEK3-201ENST00000550331 P4HBP07237 508 aaKnown RBP8.53□□□□□ -1.04
NEK3-201ENST00000550331 CTSAP10619 480 aa8.53□□□□□ -1.04
NEK3-201ENST00000550331 XBP1P17861 261 aa8.53□□□□□ -1.04
NEK3-201ENST00000550331 SP100P23497 879 aaPredicted RBP8.53□□□□□ -1.04
NEK3-201ENST00000550331 QARSP47897 775 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms