RNA–Protein interactions for RNA: ENST00000550064.5

CACNB3-213, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 746 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-213ENST00000550064 HAPLN2Q9GZV7 340 aa13.23□□□□□ -0.29
CACNB3-213ENST00000550064 KCNF1Q9H3M0 494 aa13.23□□□□□ -0.29
CACNB3-213ENST00000550064 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.23□□□□□ -0.29
CACNB3-213ENST00000550064 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.23□□□□□ -0.29
CACNB3-213ENST00000550064 CSDE1O75534 798 aaKnown RBP13.22□□□□□ -0.29
CACNB3-213ENST00000550064 IQCF3P0C7M6 154 aa13.22□□□□□ -0.29
CACNB3-213ENST00000550064 KRT13P13646 458 aa13.22□□□□□ -0.29
CACNB3-213ENST00000550064 MCCD1P59942 119 aaPredicted RBP13.22□□□□□ -0.29
CACNB3-213ENST00000550064 CDC42EP1Q00587 391 aa13.22□□□□□ -0.29
CACNB3-213ENST00000550064 TMEM62Q0P6H9 643 aa13.22□□□□□ -0.29
CACNB3-213ENST00000550064 KCNMA1Q12791 1236 aa13.22□□□□□ -0.29
CACNB3-213ENST00000550064 PRPF4BQ13523 1007 aaKnown RBP13.22□□□□□ -0.29
CACNB3-213ENST00000550064 SNRNP35Q16560 246 aaKnown RBP13.22□□□□□ -0.29
CACNB3-213ENST00000550064 FAM187BQ17R55 369 aa13.22□□□□□ -0.29
CACNB3-213ENST00000550064 INTS8Q75QN2 995 aaKnown RBP13.22□□□□□ -0.29
CACNB3-213ENST00000550064 ZNF410Q86VK4 478 aa13.22□□□□□ -0.29
CACNB3-213ENST00000550064 LRRC8AQ8IWT6 810 aa13.22□□□□□ -0.29
CACNB3-213ENST00000550064 CCDC150Q8NCX0 1101 aa13.22□□□□□ -0.29
CACNB3-213ENST00000550064 CPLX3Q8WVH0 158 aa13.22□□□□□ -0.29
CACNB3-213ENST00000550064 DNAJB3Q8WWF6 145 aa13.22□□□□□ -0.29
CACNB3-213ENST00000550064 PCMTD1Q96MG8 357 aaPredicted RBP13.22□□□□□ -0.29
CACNB3-213ENST00000550064 SCLT1Q96NL6 688 aa13.22□□□□□ -0.29
CACNB3-213ENST00000550064 MSTO1Q9BUK6 570 aa13.22□□□□□ -0.29
CACNB3-213ENST00000550064 ADAMTS10Q9H324 1103 aa13.22□□□□□ -0.29
CACNB3-213ENST00000550064 PRMT7Q9NVM4 692 aaPredicted RBP13.22□□□□□ -0.29
CACNB3-213ENST00000550064 GTF2IRD1Q9UHL9 959 aa13.22□□□□□ -0.29
CACNB3-213ENST00000550064 AGO2Q9UKV8 859 aaKnown RBP13.22□□□□□ -0.29
CACNB3-213ENST00000550064 SIK3Q9Y2K2 1263 aa13.22□□□□□ -0.29
CACNB3-213ENST00000550064 GRIN2DO15399 1336 aa13.21□□□□□ -0.29
CACNB3-213ENST00000550064 FRMPD3Q5JV73 1810 aa13.21□□□□□ -0.29
CACNB3-213ENST00000550064 A0A0B4J269 797 aa13.21□□□□□ -0.29
CACNB3-213ENST00000550064 AKR1B15C9JRZ8 316 aaPredicted RBP13.21□□□□□ -0.29
CACNB3-213ENST00000550064 KIAA0391O15091 583 aaKnown RBP13.21□□□□□ -0.29
CACNB3-213ENST00000550064 B4GALT5O43286 388 aa13.21□□□□□ -0.29
CACNB3-213ENST00000550064 EXTL3O43909 919 aa13.21□□□□□ -0.29
CACNB3-213ENST00000550064 GPR32O75388 356 aa13.21□□□□□ -0.29
CACNB3-213ENST00000550064 TOM1L1O75674 476 aa13.21□□□□□ -0.29
CACNB3-213ENST00000550064 GYPCP04921 128 aa13.21□□□□□ -0.29
CACNB3-213ENST00000550064 TRIM49P0CI25 452 aa13.21□□□□□ -0.29
CACNB3-213ENST00000550064 TRIM49CP0CI26 452 aa13.21□□□□□ -0.29
CACNB3-213ENST00000550064 CASP14P31944 242 aa13.21□□□□□ -0.29
CACNB3-213ENST00000550064 MATR3P43243 847 aaKnown RBP eCLIP13.21□□□□□ -0.29
CACNB3-213ENST00000550064 VAMP7P51809 220 aa13.21□□□□□ -0.29
CACNB3-213ENST00000550064 ACLYP53396 1101 aa13.21□□□□□ -0.29
CACNB3-213ENST00000550064 ADKP55263 362 aaKnown RBP13.21□□□□□ -0.29
CACNB3-213ENST00000550064 LRMPQ12912 555 aa13.21□□□□□ -0.29
CACNB3-213ENST00000550064 BFSP1Q12934 665 aa13.21□□□□□ -0.29
CACNB3-213ENST00000550064 AMHR2Q16671 573 aa13.21□□□□□ -0.29
CACNB3-213ENST00000550064 KIZQ2M2Z5 673 aa13.21□□□□□ -0.29
CACNB3-213ENST00000550064 FAM47CQ5HY64 1035 aa13.21□□□□□ -0.29
CACNB3-213ENST00000550064 GDF6Q6KF10 455 aaPredicted RBP13.21□□□□□ -0.29
CACNB3-213ENST00000550064 TSHZ1Q6ZSZ6 1077 aa13.21□□□□□ -0.29
CACNB3-213ENST00000550064 SRGAP1Q7Z6B7 1085 aa13.21□□□□□ -0.29
CACNB3-213ENST00000550064 ZBTB33Q86T24 672 aa13.21□□□□□ -0.29
CACNB3-213ENST00000550064 TC2NQ8N9U0 490 aa13.21□□□□□ -0.29
CACNB3-213ENST00000550064 PLEKHO2Q8TD55 490 aa13.21□□□□□ -0.29
CACNB3-213ENST00000550064 MFSD14AQ96MC6 490 aa13.21□□□□□ -0.29
CACNB3-213ENST00000550064 FAM213AQ9BRX8 229 aa13.21□□□□□ -0.29
CACNB3-213ENST00000550064 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.21□□□□□ -0.29
CACNB3-213ENST00000550064 CDHR5Q9HBB8 845 aa13.21□□□□□ -0.29
CACNB3-213ENST00000550064 KIAA1586Q9HCI6 787 aa13.21□□□□□ -0.29
CACNB3-213ENST00000550064 ANKFY1Q9P2R3 1169 aa13.21□□□□□ -0.29
CACNB3-213ENST00000550064 ZNF233A6NK53 670 aa13.2□□□□□ -0.3
CACNB3-213ENST00000550064 RNF225M0QZC1 329 aaPredicted RBP13.2□□□□□ -0.3
CACNB3-213ENST00000550064 ABLIM1O14639 778 aa13.2□□□□□ -0.3
CACNB3-213ENST00000550064 CLDN3O15551 220 aa13.2□□□□□ -0.3
CACNB3-213ENST00000550064 CABYRO75952 493 aa13.2□□□□□ -0.3
CACNB3-213ENST00000550064 LDHAP00338 332 aaKnown RBP13.2□□□□□ -0.3
CACNB3-213ENST00000550064 PROZP22891 400 aa13.2□□□□□ -0.3
CACNB3-213ENST00000550064 SFPQP23246 707 aaKnown RBP eCLIP13.2□□□□□ -0.3
CACNB3-213ENST00000550064 FMO5P49326 533 aa13.2□□□□□ -0.3
CACNB3-213ENST00000550064 FXR1P51114 621 aaKnown RBP eCLIP13.2□□□□□ -0.3
CACNB3-213ENST00000550064 DLG4P78352 724 aa13.2□□□□□ -0.3
CACNB3-213ENST00000550064 CYP24A1Q07973 514 aa13.2□□□□□ -0.3
CACNB3-213ENST00000550064 TRIM14Q14142 442 aa13.2□□□□□ -0.3
CACNB3-213ENST00000550064 TMEM132AQ24JP5 1023 aa13.2□□□□□ -0.3
CACNB3-213ENST00000550064 C1orf220Q5T0J3 134 aa13.2□□□□□ -0.3
CACNB3-213ENST00000550064 ATF7IP2Q5U623 682 aa13.2□□□□□ -0.3
CACNB3-213ENST00000550064 EEF1DP3Q658K8 133 aa13.2□□□□□ -0.3
CACNB3-213ENST00000550064 CRELD2Q6UXH1 353 aaPredicted RBP13.2□□□□□ -0.3
CACNB3-213ENST00000550064 SESTD1Q86VW0 696 aa13.2□□□□□ -0.3
CACNB3-213ENST00000550064 NME8Q8N427 588 aa13.2□□□□□ -0.3
CACNB3-213ENST00000550064 VTI1AQ96AJ9 217 aa13.2□□□□□ -0.3
CACNB3-213ENST00000550064 TSEN34Q9BSV6 310 aaKnown RBP13.2□□□□□ -0.3
CACNB3-213ENST00000550064 CRACR2AQ9BSW2 395 aa13.2□□□□□ -0.3
CACNB3-213ENST00000550064 TCHPQ9BT92 498 aa13.2□□□□□ -0.3
CACNB3-213ENST00000550064 NUP58Q9BVL2 599 aa13.2□□□□□ -0.3
CACNB3-213ENST00000550064 GCOM2Q9BZD3 368 aaPredicted RBP13.2□□□□□ -0.3
CACNB3-213ENST00000550064 UNC93B1Q9H1C4 597 aa13.2□□□□□ -0.3
CACNB3-213ENST00000550064 MMRN2Q9H8L6 949 aa13.2□□□□□ -0.3
CACNB3-213ENST00000550064 PTPRHQ9HD43 1115 aa13.2□□□□□ -0.3
CACNB3-213ENST00000550064 TNFSF13BQ9Y275 285 aa13.2□□□□□ -0.3
CACNB3-213ENST00000550064 CNTNAP2Q9UHC6 1331 aa13.19□□□□□ -0.3
CACNB3-213ENST00000550064 TTC26A0AVF1 554 aa13.19□□□□□ -0.3
CACNB3-213ENST00000550064 MOXD2PA6NHM9 499 aa13.19□□□□□ -0.3
CACNB3-213ENST00000550064 MFAP3LO75121 409 aa13.19□□□□□ -0.3
CACNB3-213ENST00000550064 TPM1P09493 284 aa13.19□□□□□ -0.3
CACNB3-213ENST00000550064 HARSP12081 509 aaKnown RBP13.19□□□□□ -0.3
CACNB3-213ENST00000550064 ACOT2P49753 483 aa13.19□□□□□ -0.3
CACNB3-213ENST00000550064 MCL1Q07820 350 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms