RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 ZNF214Q9UL59 606 aaPredicted RBP9.66□□□□□ -0.86
TMEM116-209ENST00000550020 STXBP5LQ9Y2K9 1186 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 FAN1Q9Y2M0 1017 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 UTP11Q9Y3A2 253 aaKnown RBP9.66□□□□□ -0.86
TMEM116-209ENST00000550020 DOCK1Q14185 1865 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 FER1L6Q2WGJ9 1857 aa9.66□□□□□ -0.86
TMEM116-209ENST00000550020 GOLGA6CA6NDK9 693 aa9.65□□□□□ -0.86
TMEM116-209ENST00000550020 FAM187AA6NFU0 413 aa9.65□□□□□ -0.86
TMEM116-209ENST00000550020 FOXN3O00409 490 aaPredicted RBP9.65□□□□□ -0.86
TMEM116-209ENST00000550020 HNRNPDLO14979 420 aaKnown RBP9.65□□□□□ -0.86
TMEM116-209ENST00000550020 ATP9AO75110 1047 aa9.65□□□□□ -0.86
TMEM116-209ENST00000550020 ZMYND10O75800 440 aa9.65□□□□□ -0.86
TMEM116-209ENST00000550020 MTA2O94776 668 aa9.65□□□□□ -0.86
TMEM116-209ENST00000550020 GOLGA6DP0CG33 693 aa9.65□□□□□ -0.86
TMEM116-209ENST00000550020 MYBL1P10243 752 aa9.65□□□□□ -0.86
TMEM116-209ENST00000550020 KCNA2P16389 499 aa9.65□□□□□ -0.86
TMEM116-209ENST00000550020 CAPN2P17655 700 aa9.65□□□□□ -0.86
TMEM116-209ENST00000550020 ACTN2P35609 894 aa9.65□□□□□ -0.86
TMEM116-209ENST00000550020 USP8P40818 1118 aa9.65□□□□□ -0.86
TMEM116-209ENST00000550020 LIG4P49917 911 aa9.65□□□□□ -0.86
TMEM116-209ENST00000550020 DNA2P51530 1060 aa9.65□□□□□ -0.86
TMEM116-209ENST00000550020 AP3M2P53677 418 aa9.65□□□□□ -0.86
TMEM116-209ENST00000550020 POLGP54098 1239 aaPredicted RBP9.65□□□□□ -0.86
TMEM116-209ENST00000550020 ACTR2P61160 394 aa9.65□□□□□ -0.86
TMEM116-209ENST00000550020 GCNT1Q02742 428 aa9.65□□□□□ -0.86
TMEM116-209ENST00000550020 PPP3CAQ08209 521 aa9.65□□□□□ -0.86
TMEM116-209ENST00000550020 SPDYCQ5MJ68 293 aa9.65□□□□□ -0.86
TMEM116-209ENST00000550020 KCNV1Q6PIU1 500 aa9.65□□□□□ -0.86
TMEM116-209ENST00000550020 ANO5Q75V66 913 aa9.65□□□□□ -0.86
TMEM116-209ENST00000550020 ZNF677Q86XU0 584 aa9.65□□□□□ -0.86
TMEM116-209ENST00000550020 METTL13Q8N6R0 699 aa9.65□□□□□ -0.86
TMEM116-209ENST00000550020 PARD3BQ8TEW8 1205 aa9.65□□□□□ -0.86
TMEM116-209ENST00000550020 SLC7A3Q8WY07 619 aa9.65□□□□□ -0.86
TMEM116-209ENST00000550020 SHC3Q92529 594 aa9.65□□□□□ -0.86
TMEM116-209ENST00000550020 FAM167AQ96KS9 214 aa9.65□□□□□ -0.86
TMEM116-209ENST00000550020 FBXL18Q96ME1 805 aa9.65□□□□□ -0.86
TMEM116-209ENST00000550020 FAM129AQ9BZQ8 928 aa9.65□□□□□ -0.86
TMEM116-209ENST00000550020 GPR88Q9GZN0 384 aa9.65□□□□□ -0.86
TMEM116-209ENST00000550020 TMEM117Q9H0C3 514 aa9.65□□□□□ -0.86
TMEM116-209ENST00000550020 WNT8AQ9H1J5 351 aa9.65□□□□□ -0.86
TMEM116-209ENST00000550020 FAM204AQ9H8W3 233 aa9.65□□□□□ -0.86
TMEM116-209ENST00000550020 SUGCTQ9HAC7 445 aa9.65□□□□□ -0.86
TMEM116-209ENST00000550020 ZCCHC17Q9NP64 241 aaKnown RBP9.65□□□□□ -0.86
TMEM116-209ENST00000550020 C1orf112Q9NSG2 853 aa9.65□□□□□ -0.86
TMEM116-209ENST00000550020 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.65□□□□□ -0.86
TMEM116-209ENST00000550020 RAB20Q9NX57 234 aa9.65□□□□□ -0.86
TMEM116-209ENST00000550020 GOLGA6AQ9NYA3 693 aa9.65□□□□□ -0.86
TMEM116-209ENST00000550020 GPRC5DQ9NZD1 345 aa9.65□□□□□ -0.86
TMEM116-209ENST00000550020 CTTNBP2NLQ9P2B4 639 aa9.65□□□□□ -0.86
TMEM116-209ENST00000550020 UVRAGQ9P2Y5 699 aa9.65□□□□□ -0.86
TMEM116-209ENST00000550020 PARP2Q9UGN5 583 aa9.65□□□□□ -0.86
TMEM116-209ENST00000550020 LCMT1Q9UIC8 334 aa9.65□□□□□ -0.86
TMEM116-209ENST00000550020 AJAP1Q9UKB5 411 aaPredicted RBP9.65□□□□□ -0.86
TMEM116-209ENST00000550020 MTUS1Q9ULD2 1270 aa9.65□□□□□ -0.86
TMEM116-209ENST00000550020 NOC2LQ9Y3T9 749 aaKnown RBP9.65□□□□□ -0.86
TMEM116-209ENST00000550020 CSADQ9Y600 493 aa9.65□□□□□ -0.86
TMEM116-209ENST00000550020 GAS2O43903 313 aaKnown RBP9.64□□□□□ -0.87
TMEM116-209ENST00000550020 EXTL3O43909 919 aa9.64□□□□□ -0.87
TMEM116-209ENST00000550020 BUB1BO60566 1050 aaPredicted RBP9.64□□□□□ -0.87
TMEM116-209ENST00000550020 LRRN2O75325 713 aa9.64□□□□□ -0.87
TMEM116-209ENST00000550020 RPS6KA5O75582 802 aa9.64□□□□□ -0.87
TMEM116-209ENST00000550020 FTLP02792 175 aaPredicted RBP9.64□□□□□ -0.87
TMEM116-209ENST00000550020 TGFB3P10600 412 aa9.64□□□□□ -0.87
TMEM116-209ENST00000550020 GGCXP38435 758 aa9.64□□□□□ -0.87
TMEM116-209ENST00000550020 NAMPTP43490 491 aa9.64□□□□□ -0.87
TMEM116-209ENST00000550020 CDR1P51861 262 aa9.64□□□□□ -0.87
TMEM116-209ENST00000550020 DLG4P78352 724 aa9.64□□□□□ -0.87
TMEM116-209ENST00000550020 SLC7A5Q01650 507 aa9.64□□□□□ -0.87
TMEM116-209ENST00000550020 CDR2Q01850 454 aa9.64□□□□□ -0.87
TMEM116-209ENST00000550020 PRKCEQ02156 737 aa9.64□□□□□ -0.87
TMEM116-209ENST00000550020 MAP2K1Q02750 393 aaPredicted RBP9.64□□□□□ -0.87
TMEM116-209ENST00000550020 PPATQ06203 517 aa9.64□□□□□ -0.87
TMEM116-209ENST00000550020 CYP24A1Q07973 514 aa9.64□□□□□ -0.87
TMEM116-209ENST00000550020 DHX34Q14147 1143 aaKnown RBP9.64□□□□□ -0.87
TMEM116-209ENST00000550020 NEDD9Q14511 834 aa9.64□□□□□ -0.87
TMEM116-209ENST00000550020 HLTFQ14527 1009 aaKnown RBP eCLIP9.64□□□□□ -0.87
TMEM116-209ENST00000550020 TMEM132BQ14DG7 1078 aa9.64□□□□□ -0.87
TMEM116-209ENST00000550020 SEL1L2Q5TEA6 688 aa9.64□□□□□ -0.87
TMEM116-209ENST00000550020 PLA2G4FQ68DD2 849 aa9.64□□□□□ -0.87
TMEM116-209ENST00000550020 LRIG3Q6UXM1 1119 aa9.64□□□□□ -0.87
TMEM116-209ENST00000550020 ABHD15Q6UXT9 468 aa9.64□□□□□ -0.87
TMEM116-209ENST00000550020 TRIM72Q6ZMU5 477 aa9.64□□□□□ -0.87
TMEM116-209ENST00000550020 CROCCP2Q86T23 111 aa9.64□□□□□ -0.87
TMEM116-209ENST00000550020 KLHL7Q8IXQ5 586 aa9.64□□□□□ -0.87
TMEM116-209ENST00000550020 RPUSD2Q8IZ73 545 aaKnown RBP9.64□□□□□ -0.87
TMEM116-209ENST00000550020 ANKRD35Q8N283 1001 aa9.64□□□□□ -0.87
TMEM116-209ENST00000550020 PPM1KQ8N3J5 372 aa9.64□□□□□ -0.87
TMEM116-209ENST00000550020 DEPTORQ8TB45 409 aa9.64□□□□□ -0.87
TMEM116-209ENST00000550020 HDAC7Q8WUI4 952 aa9.64□□□□□ -0.87
TMEM116-209ENST00000550020 MAIP1Q8WWC4 291 aa9.64□□□□□ -0.87
TMEM116-209ENST00000550020 IFT81Q8WYA0 676 aa9.64□□□□□ -0.87
TMEM116-209ENST00000550020 ZKSCAN4Q969J2 545 aaPredicted RBP9.64□□□□□ -0.87
TMEM116-209ENST00000550020 FNBP1Q96RU3 617 aa9.64□□□□□ -0.87
TMEM116-209ENST00000550020 CEP89Q96ST8 783 aa9.64□□□□□ -0.87
TMEM116-209ENST00000550020 JPH2Q9BR39 696 aaPredicted RBP9.64□□□□□ -0.87
TMEM116-209ENST00000550020 BCAS3Q9H6U6 928 aa9.64□□□□□ -0.87
TMEM116-209ENST00000550020 A1CFQ9NQ94 594 aaKnown RBP9.64□□□□□ -0.87
TMEM116-209ENST00000550020 ZNF302Q9NR11 478 aa9.64□□□□□ -0.87
TMEM116-209ENST00000550020 PRDM4Q9UKN5 801 aa9.64□□□□□ -0.87
TMEM116-209ENST00000550020 AFG3L2Q9Y4W6 797 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms