RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 CDK11BP21127 795 aaKnown RBP31.46■■■□□ 2.63
BRF1-213ENST00000548421 FAM26DQ5JW98 314 aa31.46■■■□□ 2.63
BRF1-213ENST00000548421 TSHZ1Q6ZSZ6 1077 aa31.46■■■□□ 2.63
BRF1-213ENST00000548421 NECAB2Q7Z6G3 386 aa31.46■■■□□ 2.63
BRF1-213ENST00000548421 FILIP1Q7Z7B0 1213 aa31.46■■■□□ 2.63
BRF1-213ENST00000548421 IRF2BP1Q8IU81 584 aa31.46■■■□□ 2.63
BRF1-213ENST00000548421 CCDC155Q8N6L0 562 aa31.46■■■□□ 2.63
BRF1-213ENST00000548421 CAGE1Q8TC20 777 aa31.46■■■□□ 2.63
BRF1-213ENST00000548421 POMGNT1Q8WZA1 660 aa31.46■■■□□ 2.63
BRF1-213ENST00000548421 MAGEC2Q9UBF1 373 aaPredicted RBP31.46■■■□□ 2.63
BRF1-213ENST00000548421 TSPAN1O60635 241 aa31.46■■■□□ 2.63
BRF1-213ENST00000548421 TOM1L1O75674 476 aa31.46■■■□□ 2.63
BRF1-213ENST00000548421 ATP1A3P13637 1013 aa31.46■■■□□ 2.63
BRF1-213ENST00000548421 CYP2J2P51589 502 aa31.46■■■□□ 2.63
BRF1-213ENST00000548421 SPAG1Q07617 926 aa31.46■■■□□ 2.63
BRF1-213ENST00000548421 RBL2Q08999 1139 aa31.46■■■□□ 2.63
BRF1-213ENST00000548421 TMEM132AQ24JP5 1023 aa31.46■■■□□ 2.63
BRF1-213ENST00000548421 ATF7IP2Q5U623 682 aa31.46■■■□□ 2.63
BRF1-213ENST00000548421 CATSPER4Q7RTX7 472 aa31.46■■■□□ 2.63
BRF1-213ENST00000548421 TOX2Q96NM4 488 aa31.46■■■□□ 2.63
BRF1-213ENST00000548421 HSPBP1Q9NZL4 362 aa31.46■■■□□ 2.63
BRF1-213ENST00000548421 KCNJ18B7U540 433 aa31.45■■■□□ 2.62
BRF1-213ENST00000548421 GNA14O95837 355 aa31.45■■■□□ 2.62
BRF1-213ENST00000548421 CKBP12277 381 aa31.45■■■□□ 2.62
BRF1-213ENST00000548421 KCNJ12Q14500 433 aa31.45■■■□□ 2.62
BRF1-213ENST00000548421 CNOT6LQ96LI5 555 aaKnown RBP31.45■■■□□ 2.62
BRF1-213ENST00000548421 PCIF1Q9H4Z3 704 aa31.45■■■□□ 2.62
BRF1-213ENST00000548421 ANKFY1Q9P2R3 1169 aa31.45■■■□□ 2.62
BRF1-213ENST00000548421 TNFSF13BQ9Y275 285 aa31.45■■■□□ 2.62
BRF1-213ENST00000548421 DCDC2CA8MYV0 355 aa31.44■■■□□ 2.62
BRF1-213ENST00000548421 SLC16A3O15427 465 aaKnown RBP31.44■■■□□ 2.62
BRF1-213ENST00000548421 FGFR4P22455 802 aa31.44■■■□□ 2.62
BRF1-213ENST00000548421 EEF1GP26641 437 aaKnown RBP31.44■■■□□ 2.62
BRF1-213ENST00000548421 NCBP1Q09161 790 aaKnown RBP31.44■■■□□ 2.62
BRF1-213ENST00000548421 TRIM60Q495X7 471 aa31.44■■■□□ 2.62
BRF1-213ENST00000548421 TCP11X2Q5H9J9 407 aa31.44■■■□□ 2.62
BRF1-213ENST00000548421 ZNF618Q5T7W0 954 aa31.44■■■□□ 2.62
BRF1-213ENST00000548421 CEP135Q66GS9 1140 aa31.44■■■□□ 2.62
BRF1-213ENST00000548421 XXYLT1Q8NBI6 393 aa31.44■■■□□ 2.62
BRF1-213ENST00000548421 FRMD4BQ9Y2L6 1034 aa31.44■■■□□ 2.62
BRF1-213ENST00000548421 KIAA0391O15091 583 aaKnown RBP31.43■■■□□ 2.62
BRF1-213ENST00000548421 CLDN3O15551 220 aa31.43■■■□□ 2.62
BRF1-213ENST00000548421 EXOC3O60645 756 aa31.43■■■□□ 2.62
BRF1-213ENST00000548421 ARF4P18085 180 aaPredicted RBP31.43■■■□□ 2.62
BRF1-213ENST00000548421 PROZP22891 400 aa31.43■■■□□ 2.62
BRF1-213ENST00000548421 MATR3P43243 847 aaKnown RBP eCLIP31.43■■■□□ 2.621e-8■■■■□ 25.4
BRF1-213ENST00000548421 BFSP2Q13515 415 aa31.43■■■□□ 2.62
BRF1-213ENST00000548421 ANKRD20A12PQ8NF67 263 aa31.43■■■□□ 2.62
BRF1-213ENST00000548421 ZBTB45Q96K62 511 aaPredicted RBP31.43■■■□□ 2.62
BRF1-213ENST00000548421 AKAP3O75969 853 aa31.42■■■□□ 2.62
BRF1-213ENST00000548421 MPZL3Q6UWV2 235 aa31.42■■■□□ 2.62
BRF1-213ENST00000548421 TCHPQ9BT92 498 aa31.42■■■□□ 2.62
BRF1-213ENST00000548421 MKNK1Q9BUB5 465 aa31.42■■■□□ 2.62
BRF1-213ENST00000548421 PTPRHQ9HD43 1115 aa31.42■■■□□ 2.62
BRF1-213ENST00000548421 NOC2LQ9Y3T9 749 aaKnown RBP31.42■■■□□ 2.62
BRF1-213ENST00000548421 A0A0B4J269 797 aa31.41■■■□□ 2.62
BRF1-213ENST00000548421 EPB41P11171 864 aaKnown RBP31.41■■■□□ 2.62
BRF1-213ENST00000548421 PSMC2P35998 433 aaKnown RBP31.41■■■□□ 2.62
BRF1-213ENST00000548421 CASP4P49662 377 aa31.41■■■□□ 2.62
BRF1-213ENST00000548421 PLCB2Q00722 1185 aa31.41■■■□□ 2.62
BRF1-213ENST00000548421 TLE2Q04725 743 aa31.41■■■□□ 2.62
BRF1-213ENST00000548421 CCDC40Q4G0X9 1142 aa31.41■■■□□ 2.62
BRF1-213ENST00000548421 FAM228AQ86W67 206 aa31.41■■■□□ 2.62
BRF1-213ENST00000548421 CREBRFQ8IUR6 639 aa31.41■■■□□ 2.62
BRF1-213ENST00000548421 CPB2Q96IY4 423 aa31.41■■■□□ 2.62
BRF1-213ENST00000548421 MSTO1Q9BUK6 570 aa31.41■■■□□ 2.62
BRF1-213ENST00000548421 HAPLN2Q9GZV7 340 aa31.41■■■□□ 2.62
BRF1-213ENST00000548421 AGPAT5Q9NUQ2 364 aa31.41■■■□□ 2.62
BRF1-213ENST00000548421 AGO2Q9UKV8 859 aaKnown RBP31.41■■■□□ 2.62
BRF1-213ENST00000548421 ABLIM1O14639 778 aa31.4■■■□□ 2.62
BRF1-213ENST00000548421 RPS6KA5O75582 802 aa31.4■■■□□ 2.62
BRF1-213ENST00000548421 AXLP30530 894 aa31.4■■■□□ 2.62
BRF1-213ENST00000548421 MARSP56192 900 aaKnown RBP31.4■■■□□ 2.62
BRF1-213ENST00000548421 MCL1Q07820 350 aa31.4■■■□□ 2.62
BRF1-213ENST00000548421 ZNF568Q3ZCX4 644 aa31.4■■■□□ 2.62
BRF1-213ENST00000548421 FBXO47Q5MNV8 452 aa31.4■■■□□ 2.62
BRF1-213ENST00000548421 SARM1Q6SZW1 724 aa31.4■■■□□ 2.62
BRF1-213ENST00000548421 PDZD7Q9H5P4 517 aa31.4■■■□□ 2.62
BRF1-213ENST00000548421 SQORQ9Y6N5 450 aa31.4■■■□□ 2.62
BRF1-213ENST00000548421 A0A1B0GUA9 196 aa31.4■■■□□ 2.62
BRF1-213ENST00000548421 PITPNM1O00562 1244 aa31.4■■■□□ 2.62
BRF1-213ENST00000548421 N4BP3O15049 544 aa31.4■■■□□ 2.62
BRF1-213ENST00000548421 EN2P19622 333 aaPredicted RBP31.4■■■□□ 2.62
BRF1-213ENST00000548421 FANCCQ00597 558 aa31.4■■■□□ 2.62
BRF1-213ENST00000548421 HSP90AA2PQ14568 343 aaPredicted RBP31.4■■■□□ 2.62
BRF1-213ENST00000548421 NOLC1Q14978 699 aaKnown RBP eCLIP31.4■■■□□ 2.62
BRF1-213ENST00000548421 TRAF7Q6Q0C0 670 aa31.4■■■□□ 2.62
BRF1-213ENST00000548421 FAM186BQ8IYM0 893 aa31.4■■■□□ 2.62
BRF1-213ENST00000548421 GPD1LQ8N335 351 aa31.4■■■□□ 2.62
BRF1-213ENST00000548421 SAAL1Q96ER3 474 aa31.4■■■□□ 2.62
BRF1-213ENST00000548421 LIMA1Q9UHB6 759 aaKnown RBP31.4■■■□□ 2.62
BRF1-213ENST00000548421 ATP11BQ9Y2G3 1177 aa31.4■■■□□ 2.62
BRF1-213ENST00000548421 TANC1Q9C0D5 1861 aa31.39■■■□□ 2.62
BRF1-213ENST00000548421 SERPINC1P01008 464 aa31.39■■■□□ 2.62
BRF1-213ENST00000548421 SELPP16109 830 aa31.39■■■□□ 2.62
BRF1-213ENST00000548421 HOXA11P31270 313 aaPredicted RBP31.39■■■□□ 2.62
BRF1-213ENST00000548421 FAAP100Q0VG06 881 aa31.39■■■□□ 2.62
BRF1-213ENST00000548421 KRT31Q15323 416 aa31.39■■■□□ 2.62
BRF1-213ENST00000548421 EEF1DP3Q658K8 133 aa31.39■■■□□ 2.62
BRF1-213ENST00000548421 NOTUMQ6P988 496 aa31.39■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms