RNA–Protein interactions for RNA: ENST00000546483.1

ATXN2-216, Transcript of ataxin 2, humanhuman

TSL 2

Gene ATXN2, Length 2,098 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-216ENST00000546483 WHRNQ9P202 907 aa13.1□□□□□ -0.31
ATXN2-216ENST00000546483 STK38LQ9Y2H1 464 aa13.1□□□□□ -0.31
ATXN2-216ENST00000546483 NAV1Q8NEY1 1877 aa13.1□□□□□ -0.31
ATXN2-216ENST00000546483 ADGRA3Q8IWK6 1321 aa13.1□□□□□ -0.31
ATXN2-216ENST00000546483 SMIM23A6NLE4 172 aa13.09□□□□□ -0.31
ATXN2-216ENST00000546483 MTA2O94776 668 aa13.09□□□□□ -0.31
ATXN2-216ENST00000546483 FGFR4P22455 802 aa13.09□□□□□ -0.31
ATXN2-216ENST00000546483 PRPF4BQ13523 1007 aaKnown RBP13.09□□□□□ -0.31
ATXN2-216ENST00000546483 RHBDF2Q6PJF5 856 aa13.09□□□□□ -0.31
ATXN2-216ENST00000546483 CCDC137Q6PK04 289 aaKnown RBP13.09□□□□□ -0.31
ATXN2-216ENST00000546483 ARHGEF18Q6ZSZ5 1173 aa13.09□□□□□ -0.31
ATXN2-216ENST00000546483 TLE6Q9H808 572 aa13.09□□□□□ -0.31
ATXN2-216ENST00000546483 ETNK1Q9HBU6 452 aa13.09□□□□□ -0.31
ATXN2-216ENST00000546483 NKX1-2Q9UD57 310 aaPredicted RBP13.09□□□□□ -0.31
ATXN2-216ENST00000546483 DDX25Q9UHL0 483 aaKnown RBP13.09□□□□□ -0.31
ATXN2-216ENST00000546483 PCDHA12Q9UN75 941 aa13.09□□□□□ -0.31
ATXN2-216ENST00000546483 STARD13Q9Y3M8 1113 aa13.09□□□□□ -0.31
ATXN2-216ENST00000546483 DDX60LQ5H9U9 1706 aaKnown RBP13.09□□□□□ -0.31
ATXN2-216ENST00000546483 PASKQ96RG2 1323 aa13.09□□□□□ -0.31
ATXN2-216ENST00000546483 WTIPA6NIX2 430 aaPredicted RBP13.09□□□□□ -0.31
ATXN2-216ENST00000546483 E9PMD0 336 aa13.09□□□□□ -0.31
ATXN2-216ENST00000546483 TP73O15350 636 aa13.09□□□□□ -0.31
ATXN2-216ENST00000546483 ZBTB7AO95365 584 aa13.09□□□□□ -0.31
ATXN2-216ENST00000546483 LMNAP02545 664 aaKnown RBP13.09□□□□□ -0.31
ATXN2-216ENST00000546483 CDC25CP30307 473 aa13.09□□□□□ -0.31
ATXN2-216ENST00000546483 COPB2P35606 906 aa13.09□□□□□ -0.31
ATXN2-216ENST00000546483 SLCO1A2P46721 670 aa13.09□□□□□ -0.31
ATXN2-216ENST00000546483 PEX5P50542 639 aa13.09□□□□□ -0.31
ATXN2-216ENST00000546483 SLC18A1P54219 525 aa13.09□□□□□ -0.31
ATXN2-216ENST00000546483 PPP1R21Q6ZMI0 780 aa13.09□□□□□ -0.31
ATXN2-216ENST00000546483 ZDHHC14Q8IZN3 488 aa13.09□□□□□ -0.31
ATXN2-216ENST00000546483 IFT43Q96FT9 208 aa13.09□□□□□ -0.31
ATXN2-216ENST00000546483 ZSWIM1Q9BR11 485 aa13.09□□□□□ -0.31
ATXN2-216ENST00000546483 CDC42EP4Q9H3Q1 356 aaKnown RBP13.09□□□□□ -0.31
ATXN2-216ENST00000546483 TBC1D7Q9P0N9 293 aa13.09□□□□□ -0.31
ATXN2-216ENST00000546483 GGT7Q9UJ14 662 aa13.09□□□□□ -0.31
ATXN2-216ENST00000546483 ALG6Q9Y672 507 aa13.09□□□□□ -0.31
ATXN2-216ENST00000546483 ECE2O60344 883 aa13.08□□□□□ -0.32
ATXN2-216ENST00000546483 KRT13P13646 458 aa13.08□□□□□ -0.32
ATXN2-216ENST00000546483 RFX1P22670 979 aa13.08□□□□□ -0.32
ATXN2-216ENST00000546483 COILP38432 576 aaPredicted RBP13.08□□□□□ -0.32
ATXN2-216ENST00000546483 POLGP54098 1239 aaPredicted RBP13.08□□□□□ -0.32
ATXN2-216ENST00000546483 KLC1Q07866 573 aa13.08□□□□□ -0.32
ATXN2-216ENST00000546483 STRN3Q13033 797 aa13.08□□□□□ -0.32
ATXN2-216ENST00000546483 KIF22Q14807 665 aa13.08□□□□□ -0.32
ATXN2-216ENST00000546483 C16orf86Q6ZW13 317 aa13.08□□□□□ -0.32
ATXN2-216ENST00000546483 GLYCTKQ8IVS8 523 aa13.08□□□□□ -0.32
ATXN2-216ENST00000546483 FAM136AQ96C01 138 aa13.08□□□□□ -0.32
ATXN2-216ENST00000546483 ARHGEF26Q96DR7 871 aa13.08□□□□□ -0.32
ATXN2-216ENST00000546483 TGS1Q96RS0 853 aaKnown RBP13.08□□□□□ -0.32
ATXN2-216ENST00000546483 GPR88Q9GZN0 384 aa13.08□□□□□ -0.32
ATXN2-216ENST00000546483 DHX36Q9H2U1 1008 aaKnown RBP13.08□□□□□ -0.32
ATXN2-216ENST00000546483 CPVLQ9H3G5 476 aa13.08□□□□□ -0.32
ATXN2-216ENST00000546483 LRRC19Q9H756 370 aa13.08□□□□□ -0.32
ATXN2-216ENST00000546483 AAASQ9NRG9 546 aa13.08□□□□□ -0.32
ATXN2-216ENST00000546483 COG5Q9UP83 839 aa13.08□□□□□ -0.32
ATXN2-216ENST00000546483 TRIM33Q9UPN9 1127 aa13.08□□□□□ -0.32
ATXN2-216ENST00000546483 KIAA1024Q9UPX6 916 aa13.08□□□□□ -0.32
ATXN2-216ENST00000546483 USP20Q9Y2K6 914 aa13.08□□□□□ -0.32
ATXN2-216ENST00000546483 PLIN4Q96Q06 1357 aa13.08□□□□□ -0.32
ATXN2-216ENST00000546483 HNRNPCL1O60812 293 aaKnown RBP13.08□□□□□ -0.32
ATXN2-216ENST00000546483 NR3C1P04150 777 aa13.08□□□□□ -0.32
ATXN2-216ENST00000546483 TAC1P20366 129 aa13.08□□□□□ -0.32
ATXN2-216ENST00000546483 HIBADHP31937 336 aaKnown RBP13.08□□□□□ -0.32
ATXN2-216ENST00000546483 CASP5P51878 434 aa13.08□□□□□ -0.32
ATXN2-216ENST00000546483 ZNF211Q13398 564 aaPredicted RBP13.08□□□□□ -0.32
ATXN2-216ENST00000546483 GIT2Q14161 759 aa13.08□□□□□ -0.32
ATXN2-216ENST00000546483 MPP2Q14168 576 aa13.08□□□□□ -0.32
ATXN2-216ENST00000546483 LRRC14Q15048 493 aa13.08□□□□□ -0.32
ATXN2-216ENST00000546483 SIX1Q15475 284 aaPredicted RBP13.08□□□□□ -0.32
ATXN2-216ENST00000546483 USP17L2Q6R6M4 530 aa13.08□□□□□ -0.32
ATXN2-216ENST00000546483 RELL1Q8IUW5 271 aa13.08□□□□□ -0.32
ATXN2-216ENST00000546483 FAM13CQ8NE31 585 aa13.08□□□□□ -0.32
ATXN2-216ENST00000546483 CD101Q93033 1021 aa13.08□□□□□ -0.32
ATXN2-216ENST00000546483 MBOAT7Q96N66 472 aa13.08□□□□□ -0.32
ATXN2-216ENST00000546483 FAM167BQ9BTA0 163 aa13.08□□□□□ -0.32
ATXN2-216ENST00000546483 MKNK1Q9BUB5 465 aa13.08□□□□□ -0.32
ATXN2-216ENST00000546483 WNT8AQ9H1J5 351 aa13.08□□□□□ -0.32
ATXN2-216ENST00000546483 EURLQ9NYK6 297 aa13.08□□□□□ -0.32
ATXN2-216ENST00000546483 ANKRD31Q8N7Z5 1873 aa13.07□□□□□ -0.32
ATXN2-216ENST00000546483 ASTN1O14525 1302 aa13.07□□□□□ -0.32
ATXN2-216ENST00000546483 MPHOSPH10O00566 681 aaKnown RBP13.07□□□□□ -0.32
ATXN2-216ENST00000546483 TTC4O95801 387 aa13.07□□□□□ -0.32
ATXN2-216ENST00000546483 SNHG28P0DPA3 235 aa13.07□□□□□ -0.32
ATXN2-216ENST00000546483 TSNAXIP1Q2TAA8 658 aa13.07□□□□□ -0.32
ATXN2-216ENST00000546483 ASPRV1Q53RT3 343 aa13.07□□□□□ -0.32
ATXN2-216ENST00000546483 IRGCQ6NXR0 463 aa13.07□□□□□ -0.32
ATXN2-216ENST00000546483 SYDE1Q6ZW31 735 aaPredicted RBP13.07□□□□□ -0.32
ATXN2-216ENST00000546483 MIGA2Q7L4E1 593 aa13.07□□□□□ -0.32
ATXN2-216ENST00000546483 KCTD17Q8N5Z5 321 aa13.07□□□□□ -0.32
ATXN2-216ENST00000546483 RBBP8NLQ8NC74 664 aaPredicted RBP13.07□□□□□ -0.32
ATXN2-216ENST00000546483 RPGRQ92834 1020 aaKnown RBP13.07□□□□□ -0.32
ATXN2-216ENST00000546483 TRAPPC9Q96Q05 1148 aa13.07□□□□□ -0.32
ATXN2-216ENST00000546483 CRAMP1Q96RY5 1269 aa13.07□□□□□ -0.32
ATXN2-216ENST00000546483 CCDC113Q9H0I3 377 aa13.07□□□□□ -0.32
ATXN2-216ENST00000546483 MTUS1Q9ULD2 1270 aa13.07□□□□□ -0.32
ATXN2-216ENST00000546483 USH1CQ9Y6N9 552 aa13.07□□□□□ -0.32
ATXN2-216ENST00000546483 IRS2Q9Y4H2 1338 aa13.07□□□□□ -0.32
ATXN2-216ENST00000546483 CYP3A7-CYP3A51PA0A087WV96 503 aa13.06□□□□□ -0.32
ATXN2-216ENST00000546483 AP1G2O75843 785 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms