RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 DDHD2O94830 711 aa22.03■■□□□ 1.12
CHD4-213ENST00000545584 U2AF2P26368 475 aaKnown RBP eCLIP22.03■■□□□ 1.12
CHD4-213ENST00000545584 FXR2P51116 673 aaKnown RBP eCLIP22.03■■□□□ 1.128e-14■■■■□ 23.4
CHD4-213ENST00000545584 CBX2Q14781 532 aaPredicted RBP22.03■■□□□ 1.12
CHD4-213ENST00000545584 AMHR2Q16671 573 aa22.03■■□□□ 1.12
CHD4-213ENST00000545584 CES5AQ6NT32 575 aa22.03■■□□□ 1.12
CHD4-213ENST00000545584 SYCE2Q6PIF2 218 aa22.03■■□□□ 1.12
CHD4-213ENST00000545584 PADI6Q6TGC4 694 aa22.03■■□□□ 1.12
CHD4-213ENST00000545584 RPGRIP1Q96KN7 1286 aa22.03■■□□□ 1.12
CHD4-213ENST00000545584 GAD1Q99259 594 aa22.03■■□□□ 1.12
CHD4-213ENST00000545584 APOL6Q9BWW8 343 aa22.03■■□□□ 1.12
CHD4-213ENST00000545584 APOL5Q9BWW9 433 aa22.03■■□□□ 1.12
CHD4-213ENST00000545584 MUTYHQ9UIF7 546 aa22.03■■□□□ 1.12
CHD4-213ENST00000545584 IRAK3Q9Y616 596 aa22.03■■□□□ 1.12
CHD4-213ENST00000545584 STK24Q9Y6E0 443 aa22.03■■□□□ 1.12
CHD4-213ENST00000545584 LOC730098B7Z3J9 87 aa22.02■■□□□ 1.12
CHD4-213ENST00000545584 NR1I2O75469 434 aa22.02■■□□□ 1.12
CHD4-213ENST00000545584 CCT6AP40227 531 aaKnown RBP22.02■■□□□ 1.12
CHD4-213ENST00000545584 AFF1P51825 1210 aaKnown RBP22.02■■□□□ 1.12
CHD4-213ENST00000545584 HERC4Q5GLZ8 1057 aaPredicted RBP22.02■■□□□ 1.12
CHD4-213ENST00000545584 BCL7CQ8WUZ0 217 aaPredicted RBP22.02■■□□□ 1.12
CHD4-213ENST00000545584 AUTS2Q8WXX7 1259 aa22.02■■□□□ 1.12
CHD4-213ENST00000545584 PRIMPOLQ96LW4 560 aa22.02■■□□□ 1.12
CHD4-213ENST00000545584 C2orf40Q9H1Z8 148 aa22.02■■□□□ 1.12
CHD4-213ENST00000545584 S1PR5Q9H228 398 aa22.02■■□□□ 1.12
CHD4-213ENST00000545584 PRMT7Q9NVM4 692 aaPredicted RBP22.02■■□□□ 1.12
CHD4-213ENST00000545584 LRWD1Q9UFC0 647 aa22.02■■□□□ 1.12
CHD4-213ENST00000545584 GIT1Q9Y2X7 761 aa22.02■■□□□ 1.12
CHD4-213ENST00000545584 HES2Q9Y543 173 aa22.02■■□□□ 1.12
CHD4-213ENST00000545584 ARL5CA6NH57 179 aa22.01■■□□□ 1.11
CHD4-213ENST00000545584 B4GALT3O60512 393 aa22.01■■□□□ 1.11
CHD4-213ENST00000545584 CYP11B2P19099 503 aa22.01■■□□□ 1.11
CHD4-213ENST00000545584 MLH1P40692 756 aa22.01■■□□□ 1.11
CHD4-213ENST00000545584 NBR1Q14596 966 aa22.01■■□□□ 1.11
CHD4-213ENST00000545584 SLC27A1Q6PCB7 646 aa22.01■■□□□ 1.11
CHD4-213ENST00000545584 PPFIBP1Q86W92 1011 aa22.01■■□□□ 1.11
CHD4-213ENST00000545584 RNF39Q9H2S5 420 aa22.01■■□□□ 1.11
CHD4-213ENST00000545584 A0A1B0GUA9 196 aa22■■□□□ 1.11
CHD4-213ENST00000545584 NRP1O14786 923 aa22■■□□□ 1.11
CHD4-213ENST00000545584 INPPL1O15357 1258 aa22■■□□□ 1.11
CHD4-213ENST00000545584 B4GALT5O43286 388 aa22■■□□□ 1.11
CHD4-213ENST00000545584 NPTXRO95502 500 aa22■■□□□ 1.11
CHD4-213ENST00000545584 OR1G1P47890 313 aa22■■□□□ 1.11
CHD4-213ENST00000545584 ITIH3Q06033 890 aa22■■□□□ 1.11
CHD4-213ENST00000545584 PTGDRQ13258 359 aa22■■□□□ 1.11
CHD4-213ENST00000545584 PDIA5Q14554 519 aa22■■□□□ 1.11
CHD4-213ENST00000545584 PPP2R5AQ15172 486 aa22■■□□□ 1.11
CHD4-213ENST00000545584 TMEM132AQ24JP5 1023 aa22■■□□□ 1.11
CHD4-213ENST00000545584 PPP4R3CPQ6ZMV5 832 aa22■■□□□ 1.11
CHD4-213ENST00000545584 C4orf32Q8N8J7 132 aa22■■□□□ 1.11
CHD4-213ENST00000545584 NECTIN4Q96NY8 510 aa22■■□□□ 1.11
CHD4-213ENST00000545584 EMILIN2Q9BXX0 1053 aa22■■□□□ 1.11
CHD4-213ENST00000545584 DZANK1Q9NVP4 752 aa22■■□□□ 1.11
CHD4-213ENST00000545584 PRG3Q9Y2Y8 225 aaPredicted RBP22■■□□□ 1.11
CHD4-213ENST00000545584 LAD1O00515 517 aa21.99■■□□□ 1.11
CHD4-213ENST00000545584 SCNN1GP51170 649 aa21.99■■□□□ 1.11
CHD4-213ENST00000545584 PTPN14Q15678 1187 aa21.99■■□□□ 1.11
CHD4-213ENST00000545584 MAPK6Q16659 721 aa21.99■■□□□ 1.11
CHD4-213ENST00000545584 CDCA2Q69YH5 1023 aaPredicted RBP21.99■■□□□ 1.11
CHD4-213ENST00000545584 MCTP1Q6DN14 999 aa21.99■■□□□ 1.11
CHD4-213ENST00000545584 CDR2LQ86X02 465 aaPredicted RBP21.99■■□□□ 1.11
CHD4-213ENST00000545584 COLGALT2Q8IYK4 626 aa21.99■■□□□ 1.11
CHD4-213ENST00000545584 DEPTORQ8TB45 409 aa21.99■■□□□ 1.11
CHD4-213ENST00000545584 ADAM7Q9H2U9 754 aa21.99■■□□□ 1.11
CHD4-213ENST00000545584 NXF3Q9H4D5 531 aaKnown RBP21.99■■□□□ 1.11
CHD4-213ENST00000545584 MRPL17Q9NRX2 175 aaKnown RBP21.99■■□□□ 1.11
CHD4-213ENST00000545584 PARP2Q9UGN5 583 aa21.99■■□□□ 1.11
CHD4-213ENST00000545584 KIAA1024Q9UPX6 916 aa21.99■■□□□ 1.11
CHD4-213ENST00000545584 SSX2IPQ9Y2D8 614 aa21.99■■□□□ 1.11
CHD4-213ENST00000545584 ARIH1Q9Y4X5 557 aaPredicted RBP21.99■■□□□ 1.11
CHD4-213ENST00000545584 PCDHB6Q9Y5E3 794 aa21.99■■□□□ 1.11
CHD4-213ENST00000545584 SSBP05455 408 aaKnown RBP eCLIP21.98■■□□□ 1.11
CHD4-213ENST00000545584 NAMPTP43490 491 aa21.98■■□□□ 1.11
CHD4-213ENST00000545584 TOB1P50616 345 aaPredicted RBP21.98■■□□□ 1.11
CHD4-213ENST00000545584 FAM187BQ17R55 369 aa21.98■■□□□ 1.11
CHD4-213ENST00000545584 SNX29Q8TEQ0 813 aa21.98■■□□□ 1.11
CHD4-213ENST00000545584 TMX3Q96JJ7 454 aa21.98■■□□□ 1.11
CHD4-213ENST00000545584 IFT74Q96LB3 600 aa21.98■■□□□ 1.11
CHD4-213ENST00000545584 RIPOR3Q96MK2 946 aa21.98■■□□□ 1.11
CHD4-213ENST00000545584 ZFP42Q96MM3 310 aa21.98■■□□□ 1.11
CHD4-213ENST00000545584 COLEC11Q9BWP8 271 aa21.98■■□□□ 1.11
CHD4-213ENST00000545584 VN1R3Q9BXE9 311 aa21.98■■□□□ 1.11
CHD4-213ENST00000545584 BHMT2Q9H2M3 363 aa21.98■■□□□ 1.11
CHD4-213ENST00000545584 FZD8Q9H461 694 aa21.98■■□□□ 1.11
CHD4-213ENST00000545584 SPDYE4A6NLX3 237 aa21.97■■□□□ 1.11
CHD4-213ENST00000545584 N4BP3O15049 544 aa21.97■■□□□ 1.11
CHD4-213ENST00000545584 URODP06132 367 aa21.97■■□□□ 1.11
CHD4-213ENST00000545584 AKAP5P24588 427 aa21.97■■□□□ 1.11
CHD4-213ENST00000545584 KLRC2P26717 231 aa21.97■■□□□ 1.11
CHD4-213ENST00000545584 MTHFRP42898 656 aa21.97■■□□□ 1.11
CHD4-213ENST00000545584 MCM2P49736 904 aa21.97■■□□□ 1.11
CHD4-213ENST00000545584 DSC1Q08554 894 aa21.97■■□□□ 1.11
CHD4-213ENST00000545584 PRPF4BQ13523 1007 aaKnown RBP21.97■■□□□ 1.11
CHD4-213ENST00000545584 KRT79Q5XKE5 535 aa21.97■■□□□ 1.11
CHD4-213ENST00000545584 EDAQ92838 391 aa21.97■■□□□ 1.11
CHD4-213ENST00000545584 KIFAP3Q92845 792 aa21.97■■□□□ 1.11
CHD4-213ENST00000545584 FAM122AQ96E09 287 aa21.97■■□□□ 1.11
CHD4-213ENST00000545584 RPS6KC1Q96S38 1066 aa21.97■■□□□ 1.11
CHD4-213ENST00000545584 ADPGKQ9BRR6 497 aa21.97■■□□□ 1.11
CHD4-213ENST00000545584 MIOSQ9NXC5 875 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms