RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 SWSAP1Q6NVH7 229 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 PPP1R21Q6ZMI0 780 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 ARHGEF18Q6ZSZ5 1173 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 ZNF571Q7Z3V5 609 aaPredicted RBP6.19□□□□□ -1.42
VPS50-220ENST00000544910 GBP7Q8N8V2 638 aaPredicted RBP6.19□□□□□ -1.42
VPS50-220ENST00000544910 FBXL13Q8NEE6 735 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 AENQ8WTP8 325 aaKnown RBP6.19□□□□□ -1.42
VPS50-220ENST00000544910 JPH2Q9BR39 696 aaPredicted RBP6.19□□□□□ -1.42
VPS50-220ENST00000544910 MIS12Q9H081 205 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 Q9H521 79 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 ICAM1P05362 532 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 TBXAS1P24557 533 aaPredicted RBP6.19□□□□□ -1.42
VPS50-220ENST00000544910 TNFRSF8P28908 595 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 PSMC6P62333 389 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 DDR1Q08345 913 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 MTMR2Q13614 643 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 STXBP2Q15833 593 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 EZH2Q15910 746 aaKnown RBP6.19□□□□□ -1.42
VPS50-220ENST00000544910 LGSNQ5TDP6 509 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 FOXR2Q6PJQ5 311 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 VPS52Q8N1B4 723 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 HAS1Q92839 578 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 MMTAG2Q9BU76 263 aaKnown RBP6.19□□□□□ -1.42
VPS50-220ENST00000544910 PIM2Q9P1W9 311 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 NAGPAQ9UK23 515 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 PRDM4Q9UKN5 801 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 ATF5Q9Y2D1 282 aaPredicted RBP6.19□□□□□ -1.42
VPS50-220ENST00000544910 ARAP2Q8WZ64 1704 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 PLCH1Q4KWH8 1693 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 PLIN4Q96Q06 1357 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 FAM86B1E9PN63 330 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 IFNB1P01574 187 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 FAM86B2P0C5J1 330 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 TMOD1P28289 359 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 SLC1A1P43005 524 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 IFNAR2P48551 515 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 IRX5P78411 483 aaPredicted RBP6.18□□□□□ -1.42
VPS50-220ENST00000544910 PPP2R5CQ13362 524 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 SNRNP35Q16560 246 aaKnown RBP6.18□□□□□ -1.42
VPS50-220ENST00000544910 CCDC14Q49A88 953 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 KIAA1755Q5JYT7 1200 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 KDM7AQ6ZMT4 941 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 LRRC55Q6ZSA7 311 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 PAF1Q8N7H5 531 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 PROCA1Q8NCQ7 364 aaPredicted RBP6.18□□□□□ -1.42
VPS50-220ENST00000544910 TCP11Q8WWU5 503 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 HVCN1Q96D96 273 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 GDF3Q9NR23 364 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 OLFML3Q9NRN5 406 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 KCNH7Q9NS40 1196 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 REXO2Q9Y3B8 237 aaKnown RBP6.18□□□□□ -1.42
VPS50-220ENST00000544910 PCDHA10Q9Y5I2 948 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 AHDC1Q5TGY3 1603 aaPredicted RBP6.18□□□□□ -1.42
VPS50-220ENST00000544910 CHD4Q14839 1912 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 NAV1Q8NEY1 1877 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 GTPBP10A4D1E9 387 aaKnown RBP6.18□□□□□ -1.42
VPS50-220ENST00000544910 I3L4J1 428 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 CHUKO15111 745 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 TJP3O95049 919 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 VIL1P09327 827 aaKnown RBP6.18□□□□□ -1.42
VPS50-220ENST00000544910 TROVE2P10155 538 aaKnown RBP eCLIP6.18□□□□□ -1.42
VPS50-220ENST00000544910 AARSP49588 968 aaKnown RBP eCLIP6.18□□□□□ -1.42
VPS50-220ENST00000544910 CASP4P49662 377 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 SLC8A3P57103 927 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 AMPD2Q01433 879 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 CAPN12Q6ZSI9 719 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 SYDE1Q6ZW31 735 aaPredicted RBP6.18□□□□□ -1.42
VPS50-220ENST00000544910 TEX2Q8IWB9 1127 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 SH2D3CQ8N5H7 860 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 ZNF473Q8WTR7 871 aaKnown RBP6.18□□□□□ -1.42
VPS50-220ENST00000544910 N4BP2L2Q92802 583 aaPredicted RBP6.18□□□□□ -1.42
VPS50-220ENST00000544910 RBM41Q96IZ5 413 aaKnown RBP6.18□□□□□ -1.42
VPS50-220ENST00000544910 UVRAGQ9P2Y5 699 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 SLC9A2Q9UBY0 812 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 LRP5O75197 1615 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 K7ERI5 159 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 ACSL3O95573 720 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 CALB1P05937 261 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 CYP3A4P08684 503 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 TAL1P17542 331 aaPredicted RBP6.18□□□□□ -1.42
VPS50-220ENST00000544910 GNA15P30679 374 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 HSPA1LP34931 641 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 ECE1P42892 770 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 SUPT20HL1Q3ZLR7 823 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 TRIM72Q6ZMU5 477 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 PTF1AQ7RTS3 328 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 CREG2Q8IUH2 290 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 SLC5A5Q92911 643 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 MKL1Q969V6 931 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 AGBL1Q96MI9 1066 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 IDI2Q9BXS1 227 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 ADAM22Q9P0K1 906 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 TXNDC16Q9P2K2 825 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.18□□□□□ -1.42
VPS50-220ENST00000544910 IP6K2Q9UHH9 426 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 ZNRF3Q9ULT6 936 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 MAST2Q6P0Q8 1798 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 POC1B-GALNT4F8VUJ3 575 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 F8VZ95 297 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 KIAA0391O15091 583 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms