RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 CHD6Q8TD26 2715 aa6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 NCOR2Q9Y618 2525 aa6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 VWA3AA6NCI4 1184 aa6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 FAM205CA6NFA0 338 aa6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 PROB1E7EW31 1015 aa6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 RFXAPO00287 272 aa6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 TRAPPC3O43617 180 aa6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 STX6O43752 255 aa6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 MGEA5O60502 916 aa6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 ZC3H11AO75152 810 aaKnown RBP eCLIP6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 TBCAO75347 108 aaKnown RBP6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 STBD1O95210 358 aa6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 SSBP05455 408 aaKnown RBP eCLIP6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 SPATA31C1P0DKV0 1188 aa6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 HOXB8P17481 243 aaPredicted RBP6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 SSTR3P32745 418 aaPredicted RBP6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 NDUFV1P49821 464 aa6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 AMPD3Q01432 767 aa6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 ELAVL2Q12926 359 aaKnown RBP6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 BECN1Q14457 450 aa6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 SF3A1Q15459 793 aaKnown RBP6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 TCTN1Q2MV58 587 aa6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 LEXMQ3ZCV2 418 aa6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 KIAA1841Q6NSI8 718 aa6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 PDXDC1Q6P996 788 aa6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 POTEGQ6S5H5 508 aa6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 BMP8AQ7Z5Y6 402 aa6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 RTN4RL1Q86UN2 441 aaPredicted RBP6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 CRIPAKQ8N1N5 446 aa6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 KRI1Q8N9T8 703 aaKnown RBP6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 COLGALT1Q8NBJ5 622 aa6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 HELQQ8TDG4 1101 aa6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 POF1BQ8WVV4 589 aa6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 SNX21Q969T3 373 aa6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 CASD1Q96PB1 797 aa6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 SH2D3AQ9BRG2 576 aa6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 TMEM175Q9BSA9 504 aa6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 TCHPQ9BT92 498 aa6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 COLEC11Q9BWP8 271 aa6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 EMILIN2Q9BXX0 1053 aa6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 MRPL4Q9BYD3 311 aaKnown RBP6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 TMEM60Q9H2L4 133 aa6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 UBE2ZQ9H832 354 aaPredicted RBP6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 CLDND1Q9NY35 253 aa6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 PRKAG3Q9UGI9 489 aa6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 PARP2Q9UGN5 583 aa6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 CFAP45Q9UL16 551 aa6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 ODF2LQ9ULJ1 636 aa6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 INPP5FQ9Y2H2 1132 aa6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 FAN1Q9Y2M0 1017 aa6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 PCDHB6Q9Y5E3 794 aa6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 GTF3C3Q9Y5Q9 886 aa6.18□□□□□ -1.42
CLSTN3-215ENST00000544584 MAP1BP46821 2468 aaKnown RBP6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 A0A1B0GUA9 196 aa6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 ARHGEF37A1IGU5 675 aa6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 TMEM150BA6NC51 233 aa6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 EPOPA6NHQ4 379 aa6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 ACKR2O00590 384 aa6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 XPOTO43592 962 aaKnown RBP6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 MED24O75448 989 aa6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 CSDE1O75534 798 aaKnown RBP6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 ITGB1P05556 798 aa6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 PRKCBP05771 671 aa6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 FGFR1P11362 822 aa6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 KCNA5P22460 613 aa6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 GLRA2P23416 452 aa6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 GUCY2CP25092 1073 aa6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 MATR3P43243 847 aaKnown RBP eCLIP6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 ID4P47928 161 aa6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 BCAR1P56945 870 aa6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 ITIH3Q06033 890 aa6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 ST3GAL1Q11201 340 aa6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 CAPSQ13938 189 aa6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 TCEAL5Q5H9L2 206 aa6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 HYIQ5T013 277 aa6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 IER5LQ5T953 404 aa6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 CDCA2Q69YH5 1023 aaPredicted RBP6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 PTCRAQ6ISU1 281 aaPredicted RBP6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 CES5AQ6NT32 575 aa6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 CCDC73Q6ZRK6 1079 aa6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 STXBP4Q6ZWJ1 553 aa6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 MAEAQ7L5Y9 396 aa6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 MRPL10Q7Z7H8 261 aaKnown RBP6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 DDX53Q86TM3 631 aaKnown RBP6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 ZNF598Q86UK7 904 aaKnown RBP6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 CABP7Q86V35 215 aa6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 KSR1Q8IVT5 923 aa6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 EFHBQ8N7U6 833 aa6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 C4orf32Q8N8J7 132 aa6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 SPPL3Q8TCT6 385 aa6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 LINC01599Q8WXQ3 324 aa6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 CASP10Q92851 521 aa6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 BICD1Q96G01 975 aa6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 ZNF668Q96K58 619 aaPredicted RBP6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 TSPAN18Q96SJ8 248 aa6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 CCDC94Q9BW85 323 aaPredicted RBP6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 IGFLR1Q9H665 355 aa6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 TMEM134Q9H6X4 195 aa6.17□□□□□ -1.42
CLSTN3-215ENST00000544584 KMT5AQ9NQR1 393 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms