RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, human

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LEMD3-205	ENST00000544506	THRAP3	Q9Y2W1	955 aa	Known RBP	7	□□□□□ -1.29
LEMD3-205	ENST00000544506	LUC7L2	Q9Y383	392 aa	Known RBP	7	□□□□□ -1.29
LEMD3-205	ENST00000544506	SLC30A1	Q9Y6M5	507 aa		7	□□□□□ -1.29
LEMD3-205	ENST00000544506	PATE3	B3GLJ2	98 aa		6.99	□□□□□ -1.29
LEMD3-205	ENST00000544506	PHF2	O75151	1096 aa		6.99	□□□□□ -1.29
LEMD3-205	ENST00000544506	RAD17	O75943	681 aa		6.99	□□□□□ -1.29
LEMD3-205	ENST00000544506	ZRANB2	O95218	330 aa	Known RBP eCLIP	6.99	□□□□□ -1.29
LEMD3-205	ENST00000544506	GYPE	P15421	78 aa		6.99	□□□□□ -1.29
LEMD3-205	ENST00000544506	CASR	P41180	1078 aa		6.99	□□□□□ -1.29
LEMD3-205	ENST00000544506	PLP2	Q04941	152 aa		6.99	□□□□□ -1.29
LEMD3-205	ENST00000544506	GRM7	Q14831	915 aa		6.99	□□□□□ -1.29
LEMD3-205	ENST00000544506	TMEM240	Q5SV17	173 aa		6.99	□□□□□ -1.29
LEMD3-205	ENST00000544506	NRG4	Q8WWG1	115 aa		6.99	□□□□□ -1.29
LEMD3-205	ENST00000544506	HOXB13	Q92826	284 aa	Predicted RBP	6.99	□□□□□ -1.29
LEMD3-205	ENST00000544506	RELT	Q969Z4	430 aa		6.99	□□□□□ -1.29
LEMD3-205	ENST00000544506	TCF25	Q9BQ70	676 aa		6.99	□□□□□ -1.29
LEMD3-205	ENST00000544506	ENKD1	Q9H0I2	346 aa		6.99	□□□□□ -1.29
LEMD3-205	ENST00000544506	GPRC5D	Q9NZD1	345 aa		6.99	□□□□□ -1.29
LEMD3-205	ENST00000544506		K7ESM1	405 aa		6.98	□□□□□ -1.29
LEMD3-205	ENST00000544506	FOXD2	O60548	495 aa	Predicted RBP	6.98	□□□□□ -1.29
LEMD3-205	ENST00000544506	ITGA10	O75578	1167 aa		6.98	□□□□□ -1.29
LEMD3-205	ENST00000544506	GSPT1	P15170	499 aa	Known RBP	6.98	□□□□□ -1.29
LEMD3-205	ENST00000544506	EPHB1	P54762	984 aa		6.98	□□□□□ -1.29
LEMD3-205	ENST00000544506	NPEPPS	P55786	919 aa		6.98	□□□□□ -1.29
LEMD3-205	ENST00000544506	MGAT2	Q10469	447 aa		6.98	□□□□□ -1.29
LEMD3-205	ENST00000544506	PIN1	Q13526	163 aa	Predicted RBP	6.98	□□□□□ -1.29
LEMD3-205	ENST00000544506	ICAM4	Q14773	271 aa		6.98	□□□□□ -1.29
LEMD3-205	ENST00000544506	NOMO1	Q15155	1222 aa		6.98	□□□□□ -1.29
LEMD3-205	ENST00000544506	ERICH6B	Q5W0A0	696 aa		6.98	□□□□□ -1.29
LEMD3-205	ENST00000544506	FAM180A	Q6UWF9	173 aa		6.98	□□□□□ -1.29
LEMD3-205	ENST00000544506		Q6ZVL8	140 aa		6.98	□□□□□ -1.29
LEMD3-205	ENST00000544506	RAVER1	Q8IY67	606 aa	Known RBP	6.98	□□□□□ -1.29
LEMD3-205	ENST00000544506	CMTR2	Q8IYT2	770 aa	Known RBP	6.98	□□□□□ -1.29
LEMD3-205	ENST00000544506	THEMIS	Q8N1K5	641 aa	Predicted RBP	6.98	□□□□□ -1.29
LEMD3-205	ENST00000544506	DNER	Q8NFT8	737 aa		6.98	□□□□□ -1.29
LEMD3-205	ENST00000544506	OR5M3	Q8NGP4	307 aa		6.98	□□□□□ -1.29
LEMD3-205	ENST00000544506	OR2I1P	Q8NGU4	316 aa		6.98	□□□□□ -1.29
LEMD3-205	ENST00000544506	LOXL4	Q96JB6	756 aa		6.98	□□□□□ -1.29
LEMD3-205	ENST00000544506	PLA2G3	Q9NZ20	509 aa		6.98	□□□□□ -1.29
LEMD3-205	ENST00000544506	TRPS1	Q9UHF7	1281 aa		6.98	□□□□□ -1.29
LEMD3-205	ENST00000544506	ARID1B	Q8NFD5	2236 aa	Predicted RBP	6.97	□□□□□ -1.29
LEMD3-205	ENST00000544506	ADCY6	O43306	1168 aa		6.97	□□□□□ -1.29
LEMD3-205	ENST00000544506	STC2	O76061	302 aa		6.97	□□□□□ -1.29
LEMD3-205	ENST00000544506	SYN1	P17600	705 aa		6.97	□□□□□ -1.29
LEMD3-205	ENST00000544506	ECHS1	P30084	290 aa		6.97	□□□□□ -1.29
LEMD3-205	ENST00000544506	MSX2	P35548	267 aa	Predicted RBP	6.97	□□□□□ -1.29
LEMD3-205	ENST00000544506	KIF23	Q02241	960 aa	Predicted RBP	6.97	□□□□□ -1.29
LEMD3-205	ENST00000544506	FOXL1	Q12952	345 aa		6.97	□□□□□ -1.29
LEMD3-205	ENST00000544506	SEPT2	Q15019	361 aa		6.97	□□□□□ -1.29
LEMD3-205	ENST00000544506	LILRA6	Q6PI73	481 aa		6.97	□□□□□ -1.29
LEMD3-205	ENST00000544506	FAM111B	Q6SJ93	734 aa		6.97	□□□□□ -1.29
LEMD3-205	ENST00000544506	POLN	Q7Z5Q5	900 aa		6.97	□□□□□ -1.29
LEMD3-205	ENST00000544506	CPA6	Q8N4T0	437 aa		6.97	□□□□□ -1.29
LEMD3-205	ENST00000544506		Q8TCH9	128 aa		6.97	□□□□□ -1.29
LEMD3-205	ENST00000544506	ARL8A	Q96BM9	186 aa		6.97	□□□□□ -1.29
LEMD3-205	ENST00000544506	AKAP10	O43572	662 aa		6.96	□□□□□ -1.3
LEMD3-205	ENST00000544506	ABLIM3	O94929	683 aa		6.96	□□□□□ -1.3
LEMD3-205	ENST00000544506	CRHR1	P34998	444 aa		6.96	□□□□□ -1.3
LEMD3-205	ENST00000544506	RAB27A	P51159	221 aa		6.96	□□□□□ -1.3
LEMD3-205	ENST00000544506	SLC16A1	P53985	500 aa		6.96	□□□□□ -1.3
LEMD3-205	ENST00000544506	ADK	P55263	362 aa	Known RBP	6.96	□□□□□ -1.3
LEMD3-205	ENST00000544506	GJC2	Q5T442	439 aa	Predicted RBP	6.96	□□□□□ -1.3
LEMD3-205	ENST00000544506	JDP2	Q8WYK2	163 aa		6.96	□□□□□ -1.3
LEMD3-205	ENST00000544506	DPF2	Q92785	391 aa		6.96	□□□□□ -1.3
LEMD3-205	ENST00000544506	SAMD11	Q96NU1	681 aa		6.96	□□□□□ -1.3
LEMD3-205	ENST00000544506	CD248	Q9HCU0	757 aa		6.96	□□□□□ -1.3
LEMD3-205	ENST00000544506	IP6K2	Q9UHH9	426 aa		6.96	□□□□□ -1.3
LEMD3-205	ENST00000544506	SERPINB13	Q9UIV8	391 aa		6.96	□□□□□ -1.3
LEMD3-205	ENST00000544506	ST6GALNAC2	Q9UJ37	374 aa		6.96	□□□□□ -1.3
LEMD3-205	ENST00000544506	CNOT11	Q9UKZ1	510 aa	Known RBP	6.96	□□□□□ -1.3
LEMD3-205	ENST00000544506	INTU	Q9ULD6	942 aa		6.96	□□□□□ -1.3
LEMD3-205	ENST00000544506	FAM171A2	A8MVW0	826 aa		6.95	□□□□□ -1.3
LEMD3-205	ENST00000544506	ZNF623	O75123	536 aa		6.95	□□□□□ -1.3
LEMD3-205	ENST00000544506	GAST	P01350	101 aa		6.95	□□□□□ -1.3
LEMD3-205	ENST00000544506	WAS	P42768	502 aa		6.95	□□□□□ -1.3
LEMD3-205	ENST00000544506	GZMK	P49863	264 aa		6.95	□□□□□ -1.3
LEMD3-205	ENST00000544506	FAM214A	Q32MH5	1076 aa		6.95	□□□□□ -1.3
LEMD3-205	ENST00000544506	PRAMEF14	Q5SWL7	426 aa		6.95	□□□□□ -1.3
LEMD3-205	ENST00000544506	FKBP15	Q5T1M5	1219 aa		6.95	□□□□□ -1.3
LEMD3-205	ENST00000544506	TRMT2A	Q8IZ69	625 aa	Known RBP	6.95	□□□□□ -1.3
LEMD3-205	ENST00000544506	OR7D4	Q8NG98	312 aa		6.95	□□□□□ -1.3
LEMD3-205	ENST00000544506	MDM1	Q8TC05	714 aa		6.95	□□□□□ -1.3
LEMD3-205	ENST00000544506	COA7	Q96BR5	231 aa		6.95	□□□□□ -1.3
LEMD3-205	ENST00000544506	IL17RA	Q96F46	866 aa		6.95	□□□□□ -1.3
LEMD3-205	ENST00000544506	UHRF1	Q96T88	793 aa	Predicted RBP	6.95	□□□□□ -1.3
LEMD3-205	ENST00000544506	CDC5L	Q99459	802 aa	Known RBP	6.95	□□□□□ -1.3
LEMD3-205	ENST00000544506	RTFDC1	Q9BY42	306 aa	Predicted RBP	6.95	□□□□□ -1.3
LEMD3-205	ENST00000544506	BCO1	Q9HAY6	547 aa		6.95	□□□□□ -1.3
LEMD3-205	ENST00000544506	TCF7L1	Q9HCS4	588 aa		6.95	□□□□□ -1.3
LEMD3-205	ENST00000544506	SAP30BP	Q9UHR5	308 aa	Known RBP	6.95	□□□□□ -1.3
LEMD3-205	ENST00000544506	SIK3	Q9Y2K2	1263 aa		6.95	□□□□□ -1.3
LEMD3-205	ENST00000544506	SH3BP1	Q9Y3L3	701 aa		6.95	□□□□□ -1.3
LEMD3-205	ENST00000544506	E2F8	A0AVK6	867 aa		6.94	□□□□□ -1.3
LEMD3-205	ENST00000544506	HTRA2	O43464	458 aa	Predicted RBP	6.94	□□□□□ -1.3
LEMD3-205	ENST00000544506	ENDOD1	O94919	500 aa		6.94	□□□□□ -1.3
LEMD3-205	ENST00000544506	IL33	O95760	270 aa		6.94	□□□□□ -1.3
LEMD3-205	ENST00000544506	COMT	P21964	271 aa		6.94	□□□□□ -1.3
LEMD3-205	ENST00000544506	SREBF1	P36956	1147 aa		6.94	□□□□□ -1.3
LEMD3-205	ENST00000544506	SLC6A9	P48067	706 aa		6.94	□□□□□ -1.3
LEMD3-205	ENST00000544506	PER3	P56645	1201 aa		6.94	□□□□□ -1.3

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