RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 FAM192AQ9GZU8 254 aa12.1□□□□□ -0.47
CDH4-201ENST00000543233 INIPQ9NRY2 104 aa12.1□□□□□ -0.47
CDH4-201ENST00000543233 FAM207AQ9NSI2 230 aaPredicted RBP12.1□□□□□ -0.47
CDH4-201ENST00000543233 INTS9Q9NV88 658 aaKnown RBP12.1□□□□□ -0.47
CDH4-201ENST00000543233 SCAF8Q9UPN6 1271 aaKnown RBP12.1□□□□□ -0.47
CDH4-201ENST00000543233 LRCH1Q9Y2L9 728 aa12.1□□□□□ -0.47
CDH4-201ENST00000543233 DDTLA6NHG4 134 aaPredicted RBP12.09□□□□□ -0.47
CDH4-201ENST00000543233 MYMKA6NI61 221 aa12.09□□□□□ -0.47
CDH4-201ENST00000543233 TPBGLP0DKB5 382 aa12.09□□□□□ -0.47
CDH4-201ENST00000543233 TCP1P17987 556 aaKnown RBP12.09□□□□□ -0.47
CDH4-201ENST00000543233 GNAZP19086 355 aa12.09□□□□□ -0.47
CDH4-201ENST00000543233 HOXA10P31260 410 aaPredicted RBP12.09□□□□□ -0.47
CDH4-201ENST00000543233 SLC1A4P43007 532 aa12.09□□□□□ -0.47
CDH4-201ENST00000543233 CRKP46108 304 aa12.09□□□□□ -0.47
CDH4-201ENST00000543233 ANKRD13CQ8N6S4 541 aa12.09□□□□□ -0.47
CDH4-201ENST00000543233 MB21D1Q8N884 522 aa12.09□□□□□ -0.47
CDH4-201ENST00000543233 PDCD7Q8N8D1 485 aaKnown RBP12.09□□□□□ -0.47
CDH4-201ENST00000543233 DAGLBQ8NCG7 672 aa12.09□□□□□ -0.47
CDH4-201ENST00000543233 CENPKQ9BS16 269 aa12.09□□□□□ -0.47
CDH4-201ENST00000543233 SPATA16Q9BXB7 569 aa12.09□□□□□ -0.47
CDH4-201ENST00000543233 METTL5Q9NRN9 209 aaKnown RBP12.09□□□□□ -0.47
CDH4-201ENST00000543233 NMRK1Q9NWW6 199 aa12.09□□□□□ -0.47
CDH4-201ENST00000543233 EFR3BQ9Y2G0 817 aa12.09□□□□□ -0.47
CDH4-201ENST00000543233 STAT3P40763 770 aa12.09□□□□□ -0.47
CDH4-201ENST00000543233 EN1Q05925 392 aaPredicted RBP12.09□□□□□ -0.47
CDH4-201ENST00000543233 TMEM266Q2M3C6 531 aa12.09□□□□□ -0.47
CDH4-201ENST00000543233 ERMARDQ5T6L9 678 aa12.09□□□□□ -0.47
CDH4-201ENST00000543233 APOBEC3HQ6NTF7 200 aaKnown RBP12.09□□□□□ -0.47
CDH4-201ENST00000543233 C15orf52Q6ZUT6 534 aaKnown RBP12.09□□□□□ -0.47
CDH4-201ENST00000543233 NELFCDQ8IXH7 590 aa12.09□□□□□ -0.47
CDH4-201ENST00000543233 GIMAP8Q8ND71 665 aaPredicted RBP12.09□□□□□ -0.47
CDH4-201ENST00000543233 P2RX5Q93086 422 aa12.09□□□□□ -0.47
CDH4-201ENST00000543233 IFT43Q96FT9 208 aa12.09□□□□□ -0.47
CDH4-201ENST00000543233 DUSP9Q99956 384 aaKnown RBP12.09□□□□□ -0.47
CDH4-201ENST00000543233 PSTPIP2Q9H939 334 aa12.09□□□□□ -0.47
CDH4-201ENST00000543233 PDP2Q9P2J9 529 aa12.09□□□□□ -0.47
CDH4-201ENST00000543233 HEY1Q9Y5J3 304 aa12.09□□□□□ -0.47
CDH4-201ENST00000543233 KIAA1551Q9HCM1 1747 aa12.09□□□□□ -0.47
CDH4-201ENST00000543233 ONECUT3O60422 494 aaPredicted RBP12.09□□□□□ -0.47
CDH4-201ENST00000543233 ZNF543Q08ER8 600 aa12.09□□□□□ -0.47
CDH4-201ENST00000543233 GRB10Q13322 594 aa12.09□□□□□ -0.47
CDH4-201ENST00000543233 C6orf183Q5T699 404 aa12.09□□□□□ -0.47
CDH4-201ENST00000543233 KRT79Q5XKE5 535 aa12.09□□□□□ -0.47
CDH4-201ENST00000543233 TTI2Q6NXR4 508 aa12.09□□□□□ -0.47
CDH4-201ENST00000543233 CAPN12Q6ZSI9 719 aa12.09□□□□□ -0.47
CDH4-201ENST00000543233 DDX42Q86XP3 938 aaKnown RBP eCLIP12.09□□□□□ -0.47
CDH4-201ENST00000543233 RBBP8NLQ8NC74 664 aaPredicted RBP12.09□□□□□ -0.47
CDH4-201ENST00000543233 KIAA0895Q8NCT3 520 aa12.09□□□□□ -0.47
CDH4-201ENST00000543233 LRRC8CQ8TDW0 803 aa12.09□□□□□ -0.47
CDH4-201ENST00000543233 USP33Q8TEY7 942 aa12.09□□□□□ -0.47
CDH4-201ENST00000543233 LRRC45Q96CN5 670 aa12.09□□□□□ -0.47
CDH4-201ENST00000543233 SPATA17Q96L03 361 aa12.09□□□□□ -0.47
CDH4-201ENST00000543233 RIOX1Q9H6W3 641 aa12.09□□□□□ -0.47
CDH4-201ENST00000543233 PLCB1Q9NQ66 1216 aa12.09□□□□□ -0.47
CDH4-201ENST00000543233 CYP39A1Q9NYL5 469 aa12.09□□□□□ -0.47
CDH4-201ENST00000543233 DDX25Q9UHL0 483 aaKnown RBP12.09□□□□□ -0.47
CDH4-201ENST00000543233 FBXL5Q9UKA1 691 aa12.09□□□□□ -0.47
CDH4-201ENST00000543233 A6NJR5 290 aa12.08□□□□□ -0.48
CDH4-201ENST00000543233 RHOBTB3O94955 611 aa12.08□□□□□ -0.48
CDH4-201ENST00000543233 TJP3O95049 919 aa12.08□□□□□ -0.48
CDH4-201ENST00000543233 EEF2P13639 858 aaKnown RBP12.08□□□□□ -0.48
CDH4-201ENST00000543233 DAAM2Q86T65 1068 aa12.08□□□□□ -0.48
CDH4-201ENST00000543233 SPATA24Q86W54 205 aa12.08□□□□□ -0.48
CDH4-201ENST00000543233 TTC8Q8TAM2 541 aa12.08□□□□□ -0.48
CDH4-201ENST00000543233 LARP4BQ92615 738 aaKnown RBP12.08□□□□□ -0.48
CDH4-201ENST00000543233 CATSPER2Q96P56 530 aa12.08□□□□□ -0.48
CDH4-201ENST00000543233 OSBPL10Q9BXB5 764 aa12.08□□□□□ -0.48
CDH4-201ENST00000543233 TDRD3Q9H7E2 651 aaKnown RBP12.08□□□□□ -0.48
CDH4-201ENST00000543233 MMRN2Q9H8L6 949 aa12.08□□□□□ -0.48
CDH4-201ENST00000543233 CNOT10Q9H9A5 744 aaKnown RBP12.08□□□□□ -0.48
CDH4-201ENST00000543233 FRMD4BQ9Y2L6 1034 aa12.08□□□□□ -0.48
CDH4-201ENST00000543233 PCDHA1Q9Y5I3 950 aa12.08□□□□□ -0.48
CDH4-201ENST00000543233 HTR3EA5X5Y0 456 aa12.08□□□□□ -0.48
CDH4-201ENST00000543233 ASAP2O43150 1006 aa12.08□□□□□ -0.48
CDH4-201ENST00000543233 PEX11AO75192 247 aa12.08□□□□□ -0.48
CDH4-201ENST00000543233 SUN1O94901 812 aa12.08□□□□□ -0.48
CDH4-201ENST00000543233 GABPAQ06546 454 aa12.08□□□□□ -0.48
CDH4-201ENST00000543233 TRIM14Q14142 442 aa12.08□□□□□ -0.48
CDH4-201ENST00000543233 ZYXQ15942 572 aaKnown RBP12.08□□□□□ -0.48
CDH4-201ENST00000543233 ECM1Q16610 540 aa12.08□□□□□ -0.48
CDH4-201ENST00000543233 CFAP221Q4G0U5 840 aa12.08□□□□□ -0.48
CDH4-201ENST00000543233 ASPRV1Q53RT3 343 aa12.08□□□□□ -0.48
CDH4-201ENST00000543233 PHLDB3Q6NSJ2 640 aa12.08□□□□□ -0.48
CDH4-201ENST00000543233 KRT26Q7Z3Y9 468 aa12.08□□□□□ -0.48
CDH4-201ENST00000543233 RNF25Q96BH1 459 aaPredicted RBP12.08□□□□□ -0.48
CDH4-201ENST00000543233 TIPINQ9BVW5 301 aa12.08□□□□□ -0.48
CDH4-201ENST00000543233 MTFR1LQ9H019 292 aa12.08□□□□□ -0.48
CDH4-201ENST00000543233 LUC7LQ9NQ29 371 aaKnown RBP12.08□□□□□ -0.48
CDH4-201ENST00000543233 ARHGEF3Q9NR81 526 aa12.08□□□□□ -0.48
CDH4-201ENST00000543233 CIDEBQ9UHD4 219 aa12.08□□□□□ -0.48
CDH4-201ENST00000543233 SPO11Q9Y5K1 396 aa12.08□□□□□ -0.48
CDH4-201ENST00000543233 N6AMT1Q9Y5N5 214 aa12.08□□□□□ -0.48
CDH4-201ENST00000543233 LGALS16A8MUM7 142 aa12.07□□□□□ -0.48
CDH4-201ENST00000543233 E9PMD0 336 aa12.07□□□□□ -0.48
CDH4-201ENST00000543233 MEIS1O00470 390 aa12.07□□□□□ -0.48
CDH4-201ENST00000543233 SPTLC1O15269 473 aa12.07□□□□□ -0.48
CDH4-201ENST00000543233 ASLP04424 464 aa12.07□□□□□ -0.48
CDH4-201ENST00000543233 PAEPP09466 180 aa12.07□□□□□ -0.48
CDH4-201ENST00000543233 NAT2P11245 290 aa12.07□□□□□ -0.48
CDH4-201ENST00000543233 MYCLP1P12525 358 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms