RNA–Protein interactions for RNA: ENST00000542133.5

NPIPB4-215, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-215ENST00000542133 TSSK4Q6SA08 328 aa8.7□□□□□ -1.02
NPIPB4-215ENST00000542133 DDX53Q86TM3 631 aaKnown RBP8.7□□□□□ -1.02
NPIPB4-215ENST00000542133 ECHDC2Q86YB7 292 aa8.7□□□□□ -1.02
NPIPB4-215ENST00000542133 KIAA0319LQ8IZA0 1049 aa8.7□□□□□ -1.02
NPIPB4-215ENST00000542133 RNF169Q8NCN4 708 aa8.7□□□□□ -1.02
NPIPB4-215ENST00000542133 WNT2BQ93097 391 aa8.7□□□□□ -1.02
NPIPB4-215ENST00000542133 IGSF21Q96ID5 467 aa8.7□□□□□ -1.02
NPIPB4-215ENST00000542133 SHDQ96IW2 340 aa8.7□□□□□ -1.02
NPIPB4-215ENST00000542133 KLHL5Q96PQ7 755 aa8.7□□□□□ -1.02
NPIPB4-215ENST00000542133 PPP1R16BQ96T49 567 aa8.7□□□□□ -1.02
NPIPB4-215ENST00000542133 VN1R3Q9BXE9 311 aa8.7□□□□□ -1.02
NPIPB4-215ENST00000542133 RHOBTB2Q9BYZ6 727 aa8.7□□□□□ -1.02
NPIPB4-215ENST00000542133 LNPKQ9C0E8 428 aa8.7□□□□□ -1.02
NPIPB4-215ENST00000542133 DCTPP1Q9H773 170 aa8.7□□□□□ -1.02
NPIPB4-215ENST00000542133 JPH1Q9HDC5 661 aaPredicted RBP8.7□□□□□ -1.02
NPIPB4-215ENST00000542133 PRMT8Q9NR22 394 aaPredicted RBP8.7□□□□□ -1.02
NPIPB4-215ENST00000542133 MAN1C1Q9NR34 630 aa8.7□□□□□ -1.02
NPIPB4-215ENST00000542133 PCDHGA10Q9Y5H3 936 aa8.7□□□□□ -1.02
NPIPB4-215ENST00000542133 NUMBLQ9Y6R0 609 aa8.7□□□□□ -1.02
NPIPB4-215ENST00000542133 BAZ2BQ9UIF8 2168 aaKnown RBP8.69□□□□□ -1.02
NPIPB4-215ENST00000542133 ASH1LQ9NR48 2969 aaKnown RBP8.69□□□□□ -1.02
NPIPB4-215ENST00000542133 B4E1Z4 1266 aa8.69□□□□□ -1.02
NPIPB4-215ENST00000542133 CYTH3O43739 400 aa8.69□□□□□ -1.02
NPIPB4-215ENST00000542133 LRP3O75074 770 aa8.69□□□□□ -1.02
NPIPB4-215ENST00000542133 ZC3H11AO75152 810 aaKnown RBP eCLIP8.69□□□□□ -1.02
NPIPB4-215ENST00000542133 CNPP09543 421 aaKnown RBP8.69□□□□□ -1.02
NPIPB4-215ENST00000542133 LAMP2P13473 410 aa8.69□□□□□ -1.02
NPIPB4-215ENST00000542133 KLRC1P26715 233 aa8.69□□□□□ -1.02
NPIPB4-215ENST00000542133 MAGEA9P43362 315 aa8.69□□□□□ -1.02
NPIPB4-215ENST00000542133 CRYBB1P53674 252 aaPredicted RBP8.69□□□□□ -1.02
NPIPB4-215ENST00000542133 MTMR1Q13613 665 aa8.69□□□□□ -1.02
NPIPB4-215ENST00000542133 UBXN2BQ14CS0 331 aa8.69□□□□□ -1.02
NPIPB4-215ENST00000542133 MLF2Q15773 248 aaPredicted RBP8.69□□□□□ -1.02
NPIPB4-215ENST00000542133 LPAL2Q16609 132 aa8.69□□□□□ -1.02
NPIPB4-215ENST00000542133 MCMDC2Q4G0Z9 681 aa8.69□□□□□ -1.02
NPIPB4-215ENST00000542133 N4BP2L1Q5TBK1 243 aaPredicted RBP8.69□□□□□ -1.02
NPIPB4-215ENST00000542133 LAIR1Q6GTX8 287 aa8.69□□□□□ -1.02
NPIPB4-215ENST00000542133 USP17L6PQ6QN14 398 aa8.69□□□□□ -1.02
NPIPB4-215ENST00000542133 PRR23CQ6ZRP0 262 aa8.69□□□□□ -1.02
NPIPB4-215ENST00000542133 PLPPR4Q7Z2D5 763 aa8.69□□□□□ -1.02
NPIPB4-215ENST00000542133 ZNF598Q86UK7 904 aaKnown RBP8.69□□□□□ -1.02
NPIPB4-215ENST00000542133 SMAP1Q8IYB5 467 aaPredicted RBP8.69□□□□□ -1.02
NPIPB4-215ENST00000542133 SMARCC2Q8TAQ2 1214 aa8.69□□□□□ -1.02
NPIPB4-215ENST00000542133 DDX1Q92499 740 aaKnown RBP8.69□□□□□ -1.02
NPIPB4-215ENST00000542133 PCMTD1Q96MG8 357 aaPredicted RBP8.69□□□□□ -1.02
NPIPB4-215ENST00000542133 NAP1L4Q99733 375 aaKnown RBP8.69□□□□□ -1.02
NPIPB4-215ENST00000542133 EMILIN2Q9BXX0 1053 aa8.69□□□□□ -1.02
NPIPB4-215ENST00000542133 OSBPL6Q9BZF3 934 aa8.69□□□□□ -1.02
NPIPB4-215ENST00000542133 RIOX1Q9H6W3 641 aa8.69□□□□□ -1.02
NPIPB4-215ENST00000542133 IFT122Q9HBG6 1241 aa8.69□□□□□ -1.02
NPIPB4-215ENST00000542133 ZMIZ1Q9ULJ6 1067 aa8.69□□□□□ -1.02
NPIPB4-215ENST00000542133 SMC3Q9UQE7 1217 aa8.69□□□□□ -1.02
NPIPB4-215ENST00000542133 MTF2Q9Y483 593 aaPredicted RBP8.69□□□□□ -1.02
NPIPB4-215ENST00000542133 COL1A2P08123 1366 aa8.69□□□□□ -1.02
NPIPB4-215ENST00000542133 WDFY3Q8IZQ1 3526 aa8.69□□□□□ -1.02
NPIPB4-215ENST00000542133 PNMA6FA0A0J9YX94 578 aa8.68□□□□□ -1.02
NPIPB4-215ENST00000542133 CCDC195A0A1B0GUA6 201 aa8.68□□□□□ -1.02
NPIPB4-215ENST00000542133 C1QTNF9BB2RNN3 333 aa8.68□□□□□ -1.02
NPIPB4-215ENST00000542133 BHMG1C9JSJ3 638 aaPredicted RBP8.68□□□□□ -1.02
NPIPB4-215ENST00000542133 PIK3CDO00329 1044 aa8.68□□□□□ -1.02
NPIPB4-215ENST00000542133 DPYSL4O14531 572 aa8.68□□□□□ -1.02
NPIPB4-215ENST00000542133 MEIS2O14770 477 aa8.68□□□□□ -1.02
NPIPB4-215ENST00000542133 INPPL1O15357 1258 aa8.68□□□□□ -1.02
NPIPB4-215ENST00000542133 GDF9O60383 454 aa8.68□□□□□ -1.02
NPIPB4-215ENST00000542133 GPR32O75388 356 aa8.68□□□□□ -1.02
NPIPB4-215ENST00000542133 C1QTNF9P0C862 333 aa8.68□□□□□ -1.02
NPIPB4-215ENST00000542133 MX1P20591 662 aa8.68□□□□□ -1.02
NPIPB4-215ENST00000542133 KLRC2P26717 231 aa8.68□□□□□ -1.02
NPIPB4-215ENST00000542133 STAT5BP51692 787 aa8.68□□□□□ -1.02
NPIPB4-215ENST00000542133 TBX4P57082 545 aa8.68□□□□□ -1.02
NPIPB4-215ENST00000542133 ACTR2P61160 394 aa8.68□□□□□ -1.02
NPIPB4-215ENST00000542133 PRKCQQ04759 706 aa8.68□□□□□ -1.02
NPIPB4-215ENST00000542133 SNW1Q13573 536 aaKnown RBP8.68□□□□□ -1.02
NPIPB4-215ENST00000542133 IFIT1BQ5T764 474 aaKnown RBP8.68□□□□□ -1.02
NPIPB4-215ENST00000542133 TYW1BQ6NUM6 668 aa8.68□□□□□ -1.02
NPIPB4-215ENST00000542133 CYP26C1Q6V0L0 522 aa8.68□□□□□ -1.02
NPIPB4-215ENST00000542133 ST13P5Q8NFI4 369 aaPredicted RBP8.68□□□□□ -1.02
NPIPB4-215ENST00000542133 ITFG2Q969R8 447 aa8.68□□□□□ -1.02
NPIPB4-215ENST00000542133 ZNF707Q96C28 371 aaPredicted RBP8.68□□□□□ -1.02
NPIPB4-215ENST00000542133 PDCL3Q9H2J4 239 aa8.68□□□□□ -1.02
NPIPB4-215ENST00000542133 LTB4R2Q9NPC1 389 aa8.68□□□□□ -1.02
NPIPB4-215ENST00000542133 SEMA4GQ9NTN9 838 aa8.68□□□□□ -1.02
NPIPB4-215ENST00000542133 SLC9A2Q9UBY0 812 aa8.68□□□□□ -1.02
NPIPB4-215ENST00000542133 UBIAD1Q9Y5Z9 338 aa8.68□□□□□ -1.02
NPIPB4-215ENST00000542133 MAST4O15021 2626 aa8.68□□□□□ -1.02
NPIPB4-215ENST00000542133 ITPR1Q14643 2758 aa8.68□□□□□ -1.02
NPIPB4-215ENST00000542133 SMG1Q96Q15 3661 aaKnown RBP8.68□□□□□ -1.02
NPIPB4-215ENST00000542133 EVPLQ92817 2033 aa8.68□□□□□ -1.02
NPIPB4-215ENST00000542133 A0A0U1RQF3 1178 aa8.67□□□□□ -1.02
NPIPB4-215ENST00000542133 CARNS1A5YM72 827 aa8.67□□□□□ -1.02
NPIPB4-215ENST00000542133 FAM170BA6NMN3 283 aa8.67□□□□□ -1.02
NPIPB4-215ENST00000542133 ZBTB42B2RXF5 422 aa8.67□□□□□ -1.02
NPIPB4-215ENST00000542133 PPP1R3GB7ZBB8 358 aa8.67□□□□□ -1.02
NPIPB4-215ENST00000542133 SMAPO00193 183 aa8.67□□□□□ -1.02
NPIPB4-215ENST00000542133 ZNF213O14771 459 aa8.67□□□□□ -1.02
NPIPB4-215ENST00000542133 PPP1R12AO14974 1030 aaPredicted RBP8.67□□□□□ -1.02
NPIPB4-215ENST00000542133 LILRB3O75022 631 aa8.67□□□□□ -1.02
NPIPB4-215ENST00000542133 RFPL2O75678 378 aa8.67□□□□□ -1.02
NPIPB4-215ENST00000542133 PAPLNO95428 1278 aa8.67□□□□□ -1.02
NPIPB4-215ENST00000542133 C22orf31O95567 290 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms